RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
CHD7-208ENST00000528280 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
CHD7-208ENST00000528280 CFAP74Q9C0B2 1584 aa15.39■□□□□ 0.05
CHD7-208ENST00000528280 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
CHD7-208ENST00000528280 ARID4BQ4LE39 1312 aaPredicted RBP15.37■□□□□ 0.05
CHD7-208ENST00000528280 FYCO1Q9BQS8 1478 aa15.36■□□□□ 0.05
CHD7-208ENST00000528280 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.05
CHD7-208ENST00000528280 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
CHD7-208ENST00000528280 KIF14Q15058 1648 aa15.33■□□□□ 0.04
CHD7-208ENST00000528280 SCAPERQ9BY12 1400 aa15.33■□□□□ 0.04
CHD7-208ENST00000528280 MAGI2Q86UL8 1455 aa15.32■□□□□ 0.04
CHD7-208ENST00000528280 MYO5CQ9NQX4 1742 aa15.29■□□□□ 0.04
CHD7-208ENST00000528280 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
CHD7-208ENST00000528280 STRCQ7RTU9 1775 aa15.29■□□□□ 0.04
CHD7-208ENST00000528280 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
CHD7-208ENST00000528280 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.04
CHD7-208ENST00000528280 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.03
CHD7-208ENST00000528280 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
CHD7-208ENST00000528280 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
CHD7-208ENST00000528280 POGZQ7Z3K3 1410 aa15.26■□□□□ 0.03
CHD7-208ENST00000528280 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
CHD7-208ENST00000528280 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
CHD7-208ENST00000528280 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
CHD7-208ENST00000528280 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
CHD7-208ENST00000528280 FER1L4A9Z1Z3 1794 aa15.25■□□□□ 0.03
CHD7-208ENST00000528280 ZMYM4Q5VZL5 1548 aa15.24■□□□□ 0.03
CHD7-208ENST00000528280 SIGLEC1Q9BZZ2 1709 aa15.24■□□□□ 0.03
CHD7-208ENST00000528280 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
CHD7-208ENST00000528280 ZNF518AQ6AHZ1 1483 aa15.23■□□□□ 0.03
CHD7-208ENST00000528280 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
CHD7-208ENST00000528280 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
CHD7-208ENST00000528280 YEATS2Q9ULM3 1422 aa15.22■□□□□ 0.03
CHD7-208ENST00000528280 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
CHD7-208ENST00000528280 ZNF777Q9ULD5 760 aaPredicted RBP15.21■□□□□ 0.03
CHD7-208ENST00000528280 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
CHD7-208ENST00000528280 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.02
CHD7-208ENST00000528280 ATP10AO60312 1499 aa15.2■□□□□ 0.02
CHD7-208ENST00000528280 CDC42BPBQ9Y5S2 1711 aa15.18■□□□□ 0.02
CHD7-208ENST00000528280 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
CHD7-208ENST00000528280 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
CHD7-208ENST00000528280 PLEKHH2Q8IVE3 1493 aa15.16■□□□□ 0.02
CHD7-208ENST00000528280 MLH3Q9UHC1 1453 aa15.16■□□□□ 0.02
CHD7-208ENST00000528280 C9orf84Q5VXU9 1444 aa15.16■□□□□ 0.02
CHD7-208ENST00000528280 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
CHD7-208ENST00000528280 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHD7-208ENST00000528280 RSPH4AQ5TD94 716 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 KDM5CP41229 1560 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
CHD7-208ENST00000528280 PTPRTO14522 1441 aa15.13■□□□□ 0.01
CHD7-208ENST00000528280 APLP2Q06481 763 aa15.13■□□□□ 0.01
CHD7-208ENST00000528280 MLECQ14165 292 aa15.13■□□□□ 0.01
CHD7-208ENST00000528280 TRAPPC8Q9Y2L5 1435 aa15.13■□□□□ 0.01
CHD7-208ENST00000528280 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
CHD7-208ENST00000528280 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CHD7-208ENST00000528280 ABCC1P33527 1531 aa15.12■□□□□ 0.01
CHD7-208ENST00000528280 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
CHD7-208ENST00000528280 ARHGEF12Q9NZN5 1544 aa15.11■□□□□ 0.01
CHD7-208ENST00000528280 MAP3K1Q13233 1512 aa15.08■□□□□ 0.01
CHD7-208ENST00000528280 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
CHD7-208ENST00000528280 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
CHD7-208ENST00000528280 REREQ9P2R6 1566 aa15.07■□□□□ 0
CHD7-208ENST00000528280 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
CHD7-208ENST00000528280 UHRF1BP1Q6BDS2 1440 aa15.06■□□□□ 0
CHD7-208ENST00000528280 NCOA2Q15596 1464 aa15.05■□□□□ -0
CHD7-208ENST00000528280 AGLP35573 1532 aa15.05■□□□□ -0
CHD7-208ENST00000528280 TIAM1Q13009 1591 aa15.05■□□□□ -0
CHD7-208ENST00000528280 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ -0
CHD7-208ENST00000528280 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
CHD7-208ENST00000528280 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
CHD7-208ENST00000528280 ZNF644Q9H582 1327 aaPredicted RBP15.04■□□□□ -0
CHD7-208ENST00000528280 TSPY4P0CV99 314 aa15.04■□□□□ -0
CHD7-208ENST00000528280 TSPY10P0CW01 314 aa15.04■□□□□ -0
CHD7-208ENST00000528280 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
CHD7-208ENST00000528280 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
CHD7-208ENST00000528280 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
CHD7-208ENST00000528280 KIDINS220Q9ULH0 1771 aa15.02□□□□□ -0.01
CHD7-208ENST00000528280 C3P01024 1663 aa15□□□□□ -0.01
CHD7-208ENST00000528280 ABCA6Q8N139 1617 aa15□□□□□ -0.01
CHD7-208ENST00000528280 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
CHD7-208ENST00000528280 MBD5Q9P267 1494 aa15□□□□□ -0.01
CHD7-208ENST00000528280 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
CHD7-208ENST00000528280 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
CHD7-208ENST00000528280 A2MP01023 1474 aa14.98□□□□□ -0.01
CHD7-208ENST00000528280 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
CHD7-208ENST00000528280 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
CHD7-208ENST00000528280 MED1Q15648 1581 aaPredicted RBP14.97□□□□□ -0.01
CHD7-208ENST00000528280 GGT6Q6P531 493 aa14.96□□□□□ -0.01
CHD7-208ENST00000528280 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.02
CHD7-208ENST00000528280 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
CHD7-208ENST00000528280 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
CHD7-208ENST00000528280 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
CHD7-208ENST00000528280 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
CHD7-208ENST00000528280 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
CHD7-208ENST00000528280 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
CHD7-208ENST00000528280 ADGBQ8N7X0 1667 aa14.92□□□□□ -0.02
CHD7-208ENST00000528280 ARHGEF5Q12774 1597 aa14.91□□□□□ -0.02
CHD7-208ENST00000528280 KIF3BO15066 747 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms