RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 SPDYE2Q495Y8 402 aa19.53■□□□□ 0.72
SDHD-204ENST00000528021 ATP10BO94823 1461 aa19.53■□□□□ 0.72
SDHD-204ENST00000528021 WDR7Q9Y4E6 1490 aa19.52■□□□□ 0.72
SDHD-204ENST00000528021 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
SDHD-204ENST00000528021 EPRSP07814 1512 aaKnown RBP19.51■□□□□ 0.71
SDHD-204ENST00000528021 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
SDHD-204ENST00000528021 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
SDHD-204ENST00000528021 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
SDHD-204ENST00000528021 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
SDHD-204ENST00000528021 GLI2P10070 1586 aa19.45■□□□□ 0.7
SDHD-204ENST00000528021 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
SDHD-204ENST00000528021 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
SDHD-204ENST00000528021 CLIP1P30622 1438 aa19.43■□□□□ 0.7
SDHD-204ENST00000528021 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
SDHD-204ENST00000528021 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
SDHD-204ENST00000528021 KIF13AQ9H1H9 1805 aa19.39■□□□□ 0.7
SDHD-204ENST00000528021 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
SDHD-204ENST00000528021 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
SDHD-204ENST00000528021 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
SDHD-204ENST00000528021 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
SDHD-204ENST00000528021 SPDYE1Q8NFV5 336 aaPredicted RBP19.29■□□□□ 0.68
SDHD-204ENST00000528021 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
SDHD-204ENST00000528021 KDM6BO15054 1643 aa19.28■□□□□ 0.68
SDHD-204ENST00000528021 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
SDHD-204ENST00000528021 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
SDHD-204ENST00000528021 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
SDHD-204ENST00000528021 MAP3K4Q9Y6R4 1608 aa19.26■□□□□ 0.67
SDHD-204ENST00000528021 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
SDHD-204ENST00000528021 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
SDHD-204ENST00000528021 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
SDHD-204ENST00000528021 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
SDHD-204ENST00000528021 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
SDHD-204ENST00000528021 CLEC11AQ9Y240 323 aa19.21■□□□□ 0.67
SDHD-204ENST00000528021 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
SDHD-204ENST00000528021 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
SDHD-204ENST00000528021 PRKAR2AP13861 404 aaKnown RBP19.19■□□□□ 0.66
SDHD-204ENST00000528021 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
SDHD-204ENST00000528021 NEO1Q92859 1461 aa19.18■□□□□ 0.66
SDHD-204ENST00000528021 RAPGEF3O95398 923 aa19.18■□□□□ 0.66
SDHD-204ENST00000528021 SSUH2Q9Y2M2 353 aa19.18■□□□□ 0.66
SDHD-204ENST00000528021 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
SDHD-204ENST00000528021 EVX2Q03828 476 aa19.17■□□□□ 0.66
SDHD-204ENST00000528021 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
SDHD-204ENST00000528021 PLCH2O75038 1416 aa19.16■□□□□ 0.66
SDHD-204ENST00000528021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.665e-8■■■■■ 28.6
SDHD-204ENST00000528021 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
SDHD-204ENST00000528021 AKNAQ7Z591 1439 aa19.14■□□□□ 0.65
SDHD-204ENST00000528021 ARAP3Q8WWN8 1544 aa19.14■□□□□ 0.65
SDHD-204ENST00000528021 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
SDHD-204ENST00000528021 FANCAO15360 1455 aa19.13■□□□□ 0.65
SDHD-204ENST00000528021 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
SDHD-204ENST00000528021 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
SDHD-204ENST00000528021 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
SDHD-204ENST00000528021 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
SDHD-204ENST00000528021 KIF14Q15058 1648 aa19.06■□□□□ 0.64
SDHD-204ENST00000528021 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
SDHD-204ENST00000528021 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
SDHD-204ENST00000528021 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
SDHD-204ENST00000528021 TTC37Q6PGP7 1564 aa19.04■□□□□ 0.64
SDHD-204ENST00000528021 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
SDHD-204ENST00000528021 ARID4BQ4LE39 1312 aaPredicted RBP19.03■□□□□ 0.64
SDHD-204ENST00000528021 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
SDHD-204ENST00000528021 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
SDHD-204ENST00000528021 C19orf67A6NJJ6 358 aa19.01■□□□□ 0.63
SDHD-204ENST00000528021 AFAP1Q8N556 730 aa19■□□□□ 0.63
SDHD-204ENST00000528021 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
SDHD-204ENST00000528021 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
SDHD-204ENST00000528021 POGZQ7Z3K3 1410 aa18.94■□□□□ 0.62
SDHD-204ENST00000528021 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
SDHD-204ENST00000528021 MAGI2Q86UL8 1455 aa18.93■□□□□ 0.62
SDHD-204ENST00000528021 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
SDHD-204ENST00000528021 KANK4Q5T7N3 995 aaPredicted RBP18.92■□□□□ 0.62
SDHD-204ENST00000528021 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
SDHD-204ENST00000528021 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
SDHD-204ENST00000528021 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
SDHD-204ENST00000528021 SPAG9O60271 1321 aaKnown RBP18.88■□□□□ 0.61
SDHD-204ENST00000528021 PRR29P0C7W0 189 aa18.87■□□□□ 0.61
SDHD-204ENST00000528021 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
SDHD-204ENST00000528021 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
SDHD-204ENST00000528021 MAP3K1Q13233 1512 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 YEATS2Q9ULM3 1422 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 ZNF644Q9H582 1327 aaPredicted RBP18.86■□□□□ 0.61
SDHD-204ENST00000528021 MLECQ14165 292 aa18.86■□□□□ 0.61
SDHD-204ENST00000528021 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
SDHD-204ENST00000528021 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
SDHD-204ENST00000528021 FRMPD1Q5SYB0 1578 aa18.85■□□□□ 0.61
SDHD-204ENST00000528021 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
SDHD-204ENST00000528021 ATP10AO60312 1499 aa18.84■□□□□ 0.61
SDHD-204ENST00000528021 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
SDHD-204ENST00000528021 ZMYM4Q5VZL5 1548 aa18.83■□□□□ 0.6
SDHD-204ENST00000528021 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
SDHD-204ENST00000528021 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
SDHD-204ENST00000528021 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
SDHD-204ENST00000528021 GABBR2O75899 941 aa18.8■□□□□ 0.6
SDHD-204ENST00000528021 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
SDHD-204ENST00000528021 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
SDHD-204ENST00000528021 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms