RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ARHGAP5Q13017 1502 aa53.01■■■■■ 6.08
SSSCA1-205ENST00000527920 LOC105371045A0A1W2PR82 267 aa52.99■■■■■ 6.07
SSSCA1-205ENST00000527920 ARHGEF40Q8TER5 1519 aa52.99■■■■■ 6.07
SSSCA1-205ENST00000527920 MAGI2Q86UL8 1455 aa52.97■■■■■ 6.07
SSSCA1-205ENST00000527920 PREX2Q70Z35 1606 aa52.93■■■■■ 6.06
SSSCA1-205ENST00000527920 CDC42BPBQ9Y5S2 1711 aa52.88■■■■■ 6.06
SSSCA1-205ENST00000527920 ZFYVE16Q7Z3T8 1539 aa52.85■■■■■ 6.05
SSSCA1-205ENST00000527920 ZNF518AQ6AHZ1 1483 aa52.82■■■■■ 6.05
SSSCA1-205ENST00000527920 MTUS2Q5JR59 1369 aa52.82■■■■■ 6.05
SSSCA1-205ENST00000527920 YEATS2Q9ULM3 1422 aa52.78■■■■■ 6.04
SSSCA1-205ENST00000527920 CDC42BPAQ5VT25 1732 aa52.77■■■■■ 6.04
SSSCA1-205ENST00000527920 KDM5CP41229 1560 aa52.73■■■■■ 6.03
SSSCA1-205ENST00000527920 GPATCH8Q9UKJ3 1502 aaKnown RBP52.73■■■■■ 6.03
SSSCA1-205ENST00000527920 ABCC1P33527 1531 aa52.72■■■■■ 6.03
SSSCA1-205ENST00000527920 EHBP1L1Q8N3D4 1523 aa52.71■■■■■ 6.03
SSSCA1-205ENST00000527920 VPS8Q8N3P4 1428 aa52.71■■■■■ 6.03
SSSCA1-205ENST00000527920 ADAMTSL3P82987 1691 aa52.7■■■■■ 6.03
SSSCA1-205ENST00000527920 ARID4BQ4LE39 1312 aaPredicted RBP52.68■■■■■ 6.02
SSSCA1-205ENST00000527920 BCORL1Q5H9F3 1711 aa52.66■■■■■ 6.02
SSSCA1-205ENST00000527920 AFAP1Q8N556 730 aa52.64■■■■■ 6.02
SSSCA1-205ENST00000527920 CCNB3Q8WWL7 1395 aa52.62■■■■■ 6.01
SSSCA1-205ENST00000527920 ARHGEF12Q9NZN5 1544 aa52.62■■■■■ 6.01
SSSCA1-205ENST00000527920 ATP10AO60312 1499 aa52.6■■■■■ 6.01
SSSCA1-205ENST00000527920 ITSN2Q9NZM3 1697 aa52.57■■■■■ 6.01
SSSCA1-205ENST00000527920 TRAPPC8Q9Y2L5 1435 aa52.57■■■■■ 6.01
SSSCA1-205ENST00000527920 MLH3Q9UHC1 1453 aa52.56■■■■■ 6
SSSCA1-205ENST00000527920 HECW2Q9P2P5 1572 aa52.55■■■■■ 6
SSSCA1-205ENST00000527920 C9orf84Q5VXU9 1444 aa52.55■■■■■ 6
SSSCA1-205ENST00000527920 SAMD9LQ8IVG5 1584 aa52.53■■■■■ 6
SSSCA1-205ENST00000527920 TIAM1Q13009 1591 aa52.52■■■■■ 6
SSSCA1-205ENST00000527920 CFDP1Q9UEE9 299 aaPredicted RBP52.52■■■■■ 6
SSSCA1-205ENST00000527920 PLEKHH2Q8IVE3 1493 aa52.5■■■■■ 5.99
SSSCA1-205ENST00000527920 PTPRMP28827 1452 aa52.49■■■■■ 5.99
SSSCA1-205ENST00000527920 SIGLEC1Q9BZZ2 1709 aa52.49■■■■■ 5.99
SSSCA1-205ENST00000527920 KIAA1107Q9UPP5 1409 aa52.49■■■■■ 5.99
SSSCA1-205ENST00000527920 ZNF777Q9ULD5 760 aaPredicted RBP52.47■■■■■ 5.99
SSSCA1-205ENST00000527920 MADDQ8WXG6 1647 aa52.45■■■■■ 5.99
SSSCA1-205ENST00000527920 SYCP2Q9BX26 1530 aa52.42■■■■■ 5.98
SSSCA1-205ENST00000527920 DIP2CQ9Y2E4 1556 aa52.41■■■■■ 5.98
SSSCA1-205ENST00000527920 MAP3K1Q13233 1512 aa52.4■■■■■ 5.98
SSSCA1-205ENST00000527920 REREQ9P2R6 1566 aa52.4■■■■■ 5.98
SSSCA1-205ENST00000527920 SUPT6HQ7KZ85 1726 aaKnown RBP52.37■■■■■ 5.97
SSSCA1-205ENST00000527920 MYT1LQ9UL68 1186 aa52.36■■■■■ 5.97
SSSCA1-205ENST00000527920 NCOA2Q15596 1464 aa52.36■■■■■ 5.97
SSSCA1-205ENST00000527920 ABCA6Q8N139 1617 aa52.33■■■■■ 5.97
SSSCA1-205ENST00000527920 LRRC9Q6ZRR7 1453 aa52.33■■■■■ 5.97
SSSCA1-205ENST00000527920 HNRNPMP52272 730 aaKnown RBP eCLIP52.3■■■■■ 5.96
SSSCA1-205ENST00000527920 KIDINS220Q9ULH0 1771 aa52.29■■■■■ 5.96
SSSCA1-205ENST00000527920 RIMS1Q86UR5 1692 aaKnown RBP52.24■■■■■ 5.95
SSSCA1-205ENST00000527920 SPAG9O60271 1321 aaKnown RBP52.23■■■■■ 5.95
SSSCA1-205ENST00000527920 AGLP35573 1532 aa52.21■■■■■ 5.95
SSSCA1-205ENST00000527920 MLECQ14165 292 aa52.21■■■■■ 5.95
SSSCA1-205ENST00000527920 ZNF644Q9H582 1327 aaPredicted RBP52.18■■■■■ 5.94
SSSCA1-205ENST00000527920 MBD5Q9P267 1494 aa52.17■■■■■ 5.94
SSSCA1-205ENST00000527920 ATP7AQ04656 1500 aa52.14■■■■■ 5.94
SSSCA1-205ENST00000527920 FER1L4A9Z1Z3 1794 aa52.13■■■■■ 5.94
SSSCA1-205ENST00000527920 INO80Q9ULG1 1556 aaPredicted RBP52.13■■■■■ 5.94
SSSCA1-205ENST00000527920 KANK4Q5T7N3 995 aaPredicted RBP52.1■■■■■ 5.93
SSSCA1-205ENST00000527920 CAMSAP2Q08AD1 1489 aa52.05■■■■■ 5.92
SSSCA1-205ENST00000527920 RTEL1-TNFRSF6BF6WH68 1400 aa52■■■■■ 5.92
SSSCA1-205ENST00000527920 APLP2Q06481 763 aa52■■■■■ 5.91
SSSCA1-205ENST00000527920 RSPH4AQ5TD94 716 aa51.99■■■■■ 5.91
SSSCA1-205ENST00000527920 CCDC141Q6ZP82 1450 aa51.97■■■■■ 5.91
SSSCA1-205ENST00000527920 PLXNC1O60486 1568 aa51.94■■■■■ 5.91
SSSCA1-205ENST00000527920 A2MP01023 1474 aa51.92■■■■■ 5.9
SSSCA1-205ENST00000527920 MYOM3Q5VTT5 1437 aa51.9■■■■■ 5.9
SSSCA1-205ENST00000527920 MIA2Q96PC5 1412 aa51.9■■■■■ 5.9
SSSCA1-205ENST00000527920 ARHGEF5Q12774 1597 aa51.89■■■■■ 5.9
SSSCA1-205ENST00000527920 LMTK3Q96Q04 1460 aa51.88■■■■■ 5.9
SSSCA1-205ENST00000527920 ADGBQ8N7X0 1667 aa51.84■■■■■ 5.89
SSSCA1-205ENST00000527920 CNTLNQ9NXG0 1405 aa51.81■■■■■ 5.89
SSSCA1-205ENST00000527920 PLPPR3Q6T4P5 718 aa51.8■■■■■ 5.88
SSSCA1-205ENST00000527920 ESF1Q9H501 851 aaKnown RBP51.78■■■■■ 5.88
SSSCA1-205ENST00000527920 DHX29Q7Z478 1369 aaKnown RBP51.72■■■■■ 5.87
SSSCA1-205ENST00000527920 CEBPAP49715 358 aaPredicted RBP51.72■■■■■ 5.87
SSSCA1-205ENST00000527920 TSPY4P0CV99 314 aa51.7■■■■■ 5.87
SSSCA1-205ENST00000527920 TSPY10P0CW01 314 aa51.7■■■■■ 5.87
SSSCA1-205ENST00000527920 PPP6R1Q9UPN7 881 aa51.64■■■■■ 5.86
SSSCA1-205ENST00000527920 C3P01024 1663 aa51.63■■■■■ 5.86
SSSCA1-205ENST00000527920 MAST1Q9Y2H9 1570 aa51.62■■■■■ 5.85
SSSCA1-205ENST00000527920 MROH2AA6NES4 1674 aa51.61■■■■■ 5.85
SSSCA1-205ENST00000527920 PREX1Q8TCU6 1659 aa51.59■■■■■ 5.85
SSSCA1-205ENST00000527920 SETD1BQ9UPS6 1966 aaKnown RBP51.56■■■■■ 5.84
SSSCA1-205ENST00000527920 GGT6Q6P531 493 aa51.54■■■■■ 5.84
SSSCA1-205ENST00000527920 FGD6Q6ZV73 1430 aa51.53■■■■■ 5.84
SSSCA1-205ENST00000527920 ZMYM3Q14202 1370 aa51.51■■■■■ 5.84
SSSCA1-205ENST00000527920 UHRF1BP1Q6BDS2 1440 aa51.51■■■■■ 5.84
SSSCA1-205ENST00000527920 PTPN23Q9H3S7 1636 aa51.51■■■■■ 5.84
SSSCA1-205ENST00000527920 HSPA2P54652 639 aa51.49■■■■■ 5.83
SSSCA1-205ENST00000527920 TCOF1Q13428 1488 aaKnown RBP51.48■■■■■ 5.83
SSSCA1-205ENST00000527920 NPATQ14207 1427 aa51.48■■■■■ 5.83
SSSCA1-205ENST00000527920 SHANK2Q9UPX8 1470 aa51.44■■■■■ 5.83
SSSCA1-205ENST00000527920 KIF3BO15066 747 aa51.44■■■■■ 5.83
SSSCA1-205ENST00000527920 FAM135AQ9P2D6 1515 aa51.43■■■■■ 5.82
SSSCA1-205ENST00000527920 CLTCQ00610 1675 aaKnown RBP51.43■■■■■ 5.82
SSSCA1-205ENST00000527920 ABCC5O15440 1437 aa51.38■■■■■ 5.82
SSSCA1-205ENST00000527920 CROCC2H7BZ55 1655 aa51.33■■■■■ 5.81
SSSCA1-205ENST00000527920 DAPK1P53355 1430 aa51.32■■■■■ 5.81
SSSCA1-205ENST00000527920 DNMT1P26358 1616 aaKnown RBP51.31■■■■■ 5.81
SSSCA1-205ENST00000527920 KDM5DQ9BY66 1539 aa51.3■■■■■ 5.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms