RNA–Protein interactions for RNA: ENST00000527356.1

CCDC84-204, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-204ENST00000527356 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
CCDC84-204ENST00000527356 KDM6BO15054 1643 aa12.17□□□□□ -0.46
CCDC84-204ENST00000527356 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
CCDC84-204ENST00000527356 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
CCDC84-204ENST00000527356 WDR62O43379 1518 aa12.15□□□□□ -0.46
CCDC84-204ENST00000527356 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
CCDC84-204ENST00000527356 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
CCDC84-204ENST00000527356 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.47
CCDC84-204ENST00000527356 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
CCDC84-204ENST00000527356 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
CCDC84-204ENST00000527356 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
CCDC84-204ENST00000527356 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
CCDC84-204ENST00000527356 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
CCDC84-204ENST00000527356 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
CCDC84-204ENST00000527356 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 C11orf95C9JLR9 678 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-204ENST00000527356 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 DAPK1P53355 1430 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 ADAMTS12P58397 1594 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
CCDC84-204ENST00000527356 CDK13Q14004 1512 aaKnown RBP12.1□□□□□ -0.47
CCDC84-204ENST00000527356 CCDC184Q52MB2 194 aa12.1□□□□□ -0.47
CCDC84-204ENST00000527356 ABCC5O15440 1437 aa12.1□□□□□ -0.47
CCDC84-204ENST00000527356 DNMT1P26358 1616 aaKnown RBP12.09□□□□□ -0.47
CCDC84-204ENST00000527356 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
CCDC84-204ENST00000527356 POLR1AO95602 1720 aaPredicted RBP12.08□□□□□ -0.48
CCDC84-204ENST00000527356 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
CCDC84-204ENST00000527356 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
CCDC84-204ENST00000527356 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
CCDC84-204ENST00000527356 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
CCDC84-204ENST00000527356 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
CCDC84-204ENST00000527356 PZPP20742 1482 aa12.03□□□□□ -0.48
CCDC84-204ENST00000527356 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
CCDC84-204ENST00000527356 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.48
CCDC84-204ENST00000527356 DISP1Q96F81 1524 aa12.02□□□□□ -0.48
CCDC84-204ENST00000527356 NUP153P49790 1475 aaKnown RBP12.02□□□□□ -0.49
CCDC84-204ENST00000527356 SMG6Q86US8 1419 aaKnown RBP12.02□□□□□ -0.49
CCDC84-204ENST00000527356 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
CCDC84-204ENST00000527356 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
CCDC84-204ENST00000527356 BCL11AQ9H165 835 aa12.01□□□□□ -0.49
CCDC84-204ENST00000527356 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
CCDC84-204ENST00000527356 ADGRL2O95490 1459 aa12□□□□□ -0.49
CCDC84-204ENST00000527356 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
CCDC84-204ENST00000527356 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
CCDC84-204ENST00000527356 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
CCDC84-204ENST00000527356 KIAA1107Q9UPP5 1409 aa11.99□□□□□ -0.49
CCDC84-204ENST00000527356 ZNF644Q9H582 1327 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-204ENST00000527356 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
CCDC84-204ENST00000527356 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
CCDC84-204ENST00000527356 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
CCDC84-204ENST00000527356 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
CCDC84-204ENST00000527356 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
CCDC84-204ENST00000527356 UHRF1BP1Q6BDS2 1440 aa11.97□□□□□ -0.49
CCDC84-204ENST00000527356 CAMSAP2Q08AD1 1489 aa11.97□□□□□ -0.49
CCDC84-204ENST00000527356 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.5
CCDC84-204ENST00000527356 KIF14Q15058 1648 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 ITSN2Q9NZM3 1697 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
CCDC84-204ENST00000527356 USP47Q96K76 1375 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 ADCY10Q96PN6 1610 aa11.95□□□□□ -0.5
CCDC84-204ENST00000527356 KDM5CP41229 1560 aa11.94□□□□□ -0.5
CCDC84-204ENST00000527356 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
CCDC84-204ENST00000527356 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
CCDC84-204ENST00000527356 CFDP1Q9UEE9 299 aaPredicted RBP11.93□□□□□ -0.5
CCDC84-204ENST00000527356 CROCC2H7BZ55 1655 aa11.93□□□□□ -0.5
CCDC84-204ENST00000527356 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
CCDC84-204ENST00000527356 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
CCDC84-204ENST00000527356 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
CCDC84-204ENST00000527356 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
CCDC84-204ENST00000527356 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
CCDC84-204ENST00000527356 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
CCDC84-204ENST00000527356 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
CCDC84-204ENST00000527356 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-204ENST00000527356 PKD2Q13563 968 aa11.9□□□□□ -0.5
CCDC84-204ENST00000527356 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
CCDC84-204ENST00000527356 SHANK2Q9UPX8 1470 aa11.9□□□□□ -0.5
CCDC84-204ENST00000527356 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
CCDC84-204ENST00000527356 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
CCDC84-204ENST00000527356 KIF15Q9NS87 1388 aa11.88□□□□□ -0.51
CCDC84-204ENST00000527356 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
CCDC84-204ENST00000527356 PTPRGP23470 1445 aa11.86□□□□□ -0.51
CCDC84-204ENST00000527356 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
CCDC84-204ENST00000527356 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
CCDC84-204ENST00000527356 RALBP1Q15311 655 aa11.85□□□□□ -0.51
CCDC84-204ENST00000527356 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
CCDC84-204ENST00000527356 ABCC10Q5T3U5 1492 aa11.85□□□□□ -0.51
CCDC84-204ENST00000527356 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
CCDC84-204ENST00000527356 CCDC136Q96JN2 1154 aa11.84□□□□□ -0.51
CCDC84-204ENST00000527356 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
CCDC84-204ENST00000527356 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
CCDC84-204ENST00000527356 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.52
CCDC84-204ENST00000527356 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
CCDC84-204ENST00000527356 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
CCDC84-204ENST00000527356 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
CCDC84-204ENST00000527356 NUP155O75694 1391 aa11.83□□□□□ -0.52
CCDC84-204ENST00000527356 SYNJ2O15056 1496 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms