RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 LMTK3Q96Q04 1460 aa27.76■■■□□ 2.03
LTBP3-208ENST00000527339 CDK11AQ9UQ88 783 aaPredicted RBP27.75■■■□□ 2.03
LTBP3-208ENST00000527339 YEATS2Q9ULM3 1422 aa27.72■■■□□ 2.03
LTBP3-208ENST00000527339 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
LTBP3-208ENST00000527339 FBXO41Q8TF61 875 aa27.71■■■□□ 2.03
LTBP3-208ENST00000527339 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
LTBP3-208ENST00000527339 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
LTBP3-208ENST00000527339 CFAP74Q9C0B2 1584 aa27.65■■■□□ 2.02
LTBP3-208ENST00000527339 KIF14Q15058 1648 aa27.65■■■□□ 2.02
LTBP3-208ENST00000527339 HSPA2P54652 639 aa27.63■■■□□ 2.01
LTBP3-208ENST00000527339 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
LTBP3-208ENST00000527339 ZFYVE16Q7Z3T8 1539 aa27.62■■■□□ 2.01
LTBP3-208ENST00000527339 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
LTBP3-208ENST00000527339 PLCH2O75038 1416 aa27.6■■■□□ 2.01
LTBP3-208ENST00000527339 SCAPERQ9BY12 1400 aa27.59■■■□□ 2.01
LTBP3-208ENST00000527339 MLECQ14165 292 aa27.58■■■□□ 2.01
LTBP3-208ENST00000527339 MYO5CQ9NQX4 1742 aa27.57■■■□□ 2
LTBP3-208ENST00000527339 POGZQ7Z3K3 1410 aa27.57■■■□□ 2
LTBP3-208ENST00000527339 MAGI2Q86UL8 1455 aa27.56■■■□□ 2
LTBP3-208ENST00000527339 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
LTBP3-208ENST00000527339 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
LTBP3-208ENST00000527339 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
LTBP3-208ENST00000527339 TIAM1Q13009 1591 aa27.47■■□□□ 1.99
LTBP3-208ENST00000527339 ATP10AO60312 1499 aa27.46■■□□□ 1.99
LTBP3-208ENST00000527339 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
LTBP3-208ENST00000527339 EFCAB2Q5VUJ9 269 aa27.45■■□□□ 1.98
LTBP3-208ENST00000527339 PREX2Q70Z35 1606 aa27.44■■□□□ 1.98
LTBP3-208ENST00000527339 CDC42BPBQ9Y5S2 1711 aa27.44■■□□□ 1.98
LTBP3-208ENST00000527339 CDC42BPAQ5VT25 1732 aa27.42■■□□□ 1.98
LTBP3-208ENST00000527339 CEBPAP49715 358 aaPredicted RBP27.42■■□□□ 1.98
LTBP3-208ENST00000527339 AFAP1Q8N556 730 aa27.42■■□□□ 1.98
LTBP3-208ENST00000527339 C9orf84Q5VXU9 1444 aa27.41■■□□□ 1.98
LTBP3-208ENST00000527339 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
LTBP3-208ENST00000527339 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
LTBP3-208ENST00000527339 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
LTBP3-208ENST00000527339 KDM5CP41229 1560 aa27.35■■□□□ 1.97
LTBP3-208ENST00000527339 ZNF518AQ6AHZ1 1483 aa27.34■■□□□ 1.97
LTBP3-208ENST00000527339 LRRC9Q6ZRR7 1453 aa27.33■■□□□ 1.97
LTBP3-208ENST00000527339 CERKQ8TCT0 537 aa27.33■■□□□ 1.97
LTBP3-208ENST00000527339 GPATCH8Q9UKJ3 1502 aaKnown RBP27.31■■□□□ 1.96
LTBP3-208ENST00000527339 DIP2CQ9Y2E4 1556 aa27.31■■□□□ 1.96
LTBP3-208ENST00000527339 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
LTBP3-208ENST00000527339 ITSN2Q9NZM3 1697 aa27.3■■□□□ 1.96
LTBP3-208ENST00000527339 PREX1Q8TCU6 1659 aa27.29■■□□□ 1.96
LTBP3-208ENST00000527339 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
LTBP3-208ENST00000527339 APLP2Q06481 763 aa27.27■■□□□ 1.96
LTBP3-208ENST00000527339 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
LTBP3-208ENST00000527339 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
LTBP3-208ENST00000527339 STRCQ7RTU9 1775 aa27.26■■□□□ 1.95
LTBP3-208ENST00000527339 ABCC1P33527 1531 aa27.25■■□□□ 1.95
LTBP3-208ENST00000527339 MLH3Q9UHC1 1453 aa27.23■■□□□ 1.95
LTBP3-208ENST00000527339 SAMD9LQ8IVG5 1584 aa27.22■■□□□ 1.95
LTBP3-208ENST00000527339 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
LTBP3-208ENST00000527339 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
LTBP3-208ENST00000527339 REREQ9P2R6 1566 aa27.22■■□□□ 1.95
LTBP3-208ENST00000527339 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.94
LTBP3-208ENST00000527339 SETD1BQ9UPS6 1966 aaKnown RBP27.18■■□□□ 1.94
LTBP3-208ENST00000527339 C3P01024 1663 aa27.17■■□□□ 1.94
LTBP3-208ENST00000527339 ZNF777Q9ULD5 760 aaPredicted RBP27.16■■□□□ 1.94
LTBP3-208ENST00000527339 PLEKHH2Q8IVE3 1493 aa27.16■■□□□ 1.94
LTBP3-208ENST00000527339 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
LTBP3-208ENST00000527339 KIDINS220Q9ULH0 1771 aa27.15■■□□□ 1.94
LTBP3-208ENST00000527339 AGLP35573 1532 aa27.15■■□□□ 1.94
LTBP3-208ENST00000527339 SYCP2Q9BX26 1530 aa27.14■■□□□ 1.94
LTBP3-208ENST00000527339 KIAA1107Q9UPP5 1409 aa27.12■■□□□ 1.93
LTBP3-208ENST00000527339 DMRT2Q9Y5R5 561 aa27.06■■□□□ 1.92
LTBP3-208ENST00000527339 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
LTBP3-208ENST00000527339 CAMSAP2Q08AD1 1489 aa27.05■■□□□ 1.92
LTBP3-208ENST00000527339 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
LTBP3-208ENST00000527339 ZNF644Q9H582 1327 aaPredicted RBP27.04■■□□□ 1.92
LTBP3-208ENST00000527339 PTPRTO14522 1441 aa27.02■■□□□ 1.92
LTBP3-208ENST00000527339 MIA2Q96PC5 1412 aa27.02■■□□□ 1.92
LTBP3-208ENST00000527339 MBD5Q9P267 1494 aa27■■□□□ 1.91
LTBP3-208ENST00000527339 ESF1Q9H501 851 aaKnown RBP26.99■■□□□ 1.91
LTBP3-208ENST00000527339 LTBP4Q8N2S1 1624 aa26.98■■□□□ 1.91
LTBP3-208ENST00000527339 NCOA1Q15788 1441 aa26.97■■□□□ 1.91
LTBP3-208ENST00000527339 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
LTBP3-208ENST00000527339 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
LTBP3-208ENST00000527339 SPAG9O60271 1321 aaKnown RBP26.95■■□□□ 1.91
LTBP3-208ENST00000527339 ILDR2Q71H61 639 aa26.95■■□□□ 1.9
LTBP3-208ENST00000527339 ARHGEF5Q12774 1597 aa26.95■■□□□ 1.9
LTBP3-208ENST00000527339 ZMYM3Q14202 1370 aa26.95■■□□□ 1.9
LTBP3-208ENST00000527339 ATP7AQ04656 1500 aa26.95■■□□□ 1.9
LTBP3-208ENST00000527339 CCDC141Q6ZP82 1450 aa26.94■■□□□ 1.9
LTBP3-208ENST00000527339 RSPH4AQ5TD94 716 aa26.93■■□□□ 1.9
LTBP3-208ENST00000527339 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
LTBP3-208ENST00000527339 MROH2AA6NES4 1674 aa26.91■■□□□ 1.9
LTBP3-208ENST00000527339 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
LTBP3-208ENST00000527339 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
LTBP3-208ENST00000527339 CAMSAP1Q5T5Y3 1602 aa26.9■■□□□ 1.9
LTBP3-208ENST00000527339 NPATQ14207 1427 aa26.9■■□□□ 1.9
LTBP3-208ENST00000527339 RTEL1-TNFRSF6BF6WH68 1400 aa26.88■■□□□ 1.89
LTBP3-208ENST00000527339 DISP3Q9P2K9 1392 aa26.87■■□□□ 1.89
LTBP3-208ENST00000527339 NCKAP5LQ9HCH0 1330 aa26.87■■□□□ 1.89
LTBP3-208ENST00000527339 CLTCQ00610 1675 aaKnown RBP26.86■■□□□ 1.89
LTBP3-208ENST00000527339 A2MP01023 1474 aa26.86■■□□□ 1.89
LTBP3-208ENST00000527339 TCOF1Q13428 1488 aaKnown RBP26.86■■□□□ 1.89
LTBP3-208ENST00000527339 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
LTBP3-208ENST00000527339 PTPRKQ15262 1439 aa26.83■■□□□ 1.89
LTBP3-208ENST00000527339 MAST1Q9Y2H9 1570 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms