RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
PRPF40B-204ENST00000527253 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
PRPF40B-204ENST00000527253 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
PRPF40B-204ENST00000527253 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
PRPF40B-204ENST00000527253 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-204ENST00000527253 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
PRPF40B-204ENST00000527253 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
PRPF40B-204ENST00000527253 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
PRPF40B-204ENST00000527253 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
PRPF40B-204ENST00000527253 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
PRPF40B-204ENST00000527253 MAGI2Q86UL8 1455 aa16.84■□□□□ 0.29
PRPF40B-204ENST00000527253 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
PRPF40B-204ENST00000527253 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
PRPF40B-204ENST00000527253 PTPRMP28827 1452 aa16.82■□□□□ 0.28
PRPF40B-204ENST00000527253 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
PRPF40B-204ENST00000527253 HECW2Q9P2P5 1572 aa16.8■□□□□ 0.28
PRPF40B-204ENST00000527253 MADDQ8WXG6 1647 aa16.79■□□□□ 0.28
PRPF40B-204ENST00000527253 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
PRPF40B-204ENST00000527253 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
PRPF40B-204ENST00000527253 KDM5CP41229 1560 aa16.78■□□□□ 0.28
PRPF40B-204ENST00000527253 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-204ENST00000527253 ATP10AO60312 1499 aa16.78■□□□□ 0.28
PRPF40B-204ENST00000527253 ZNF518AQ6AHZ1 1483 aa16.78■□□□□ 0.28
PRPF40B-204ENST00000527253 ABCC1P33527 1531 aa16.76■□□□□ 0.27
PRPF40B-204ENST00000527253 MLECQ14165 292 aa16.76■□□□□ 0.27
PRPF40B-204ENST00000527253 ZNF777Q9ULD5 760 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-204ENST00000527253 C9orf84Q5VXU9 1444 aa16.74■□□□□ 0.27
PRPF40B-204ENST00000527253 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
PRPF40B-204ENST00000527253 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
PRPF40B-204ENST00000527253 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
PRPF40B-204ENST00000527253 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
PRPF40B-204ENST00000527253 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-204ENST00000527253 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
PRPF40B-204ENST00000527253 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRPF40B-204ENST00000527253 MYT1LQ9UL68 1186 aa16.71■□□□□ 0.27
PRPF40B-204ENST00000527253 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
PRPF40B-204ENST00000527253 CFDP1Q9UEE9 299 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-204ENST00000527253 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
PRPF40B-204ENST00000527253 ZNF644Q9H582 1327 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-204ENST00000527253 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
PRPF40B-204ENST00000527253 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
PRPF40B-204ENST00000527253 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
PRPF40B-204ENST00000527253 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
PRPF40B-204ENST00000527253 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
PRPF40B-204ENST00000527253 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
PRPF40B-204ENST00000527253 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
PRPF40B-204ENST00000527253 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
PRPF40B-204ENST00000527253 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
PRPF40B-204ENST00000527253 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
PRPF40B-204ENST00000527253 CEBPAP49715 358 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-204ENST00000527253 SPAG9O60271 1321 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-204ENST00000527253 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
PRPF40B-204ENST00000527253 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
PRPF40B-204ENST00000527253 AGLP35573 1532 aa16.62■□□□□ 0.25
PRPF40B-204ENST00000527253 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
PRPF40B-204ENST00000527253 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-204ENST00000527253 HSPA2P54652 639 aa16.59■□□□□ 0.25
PRPF40B-204ENST00000527253 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
PRPF40B-204ENST00000527253 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
PRPF40B-204ENST00000527253 INO80Q9ULG1 1556 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-204ENST00000527253 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-204ENST00000527253 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
PRPF40B-204ENST00000527253 A2MP01023 1474 aa16.54■□□□□ 0.24
PRPF40B-204ENST00000527253 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
PRPF40B-204ENST00000527253 PLXNC1O60486 1568 aa16.52■□□□□ 0.24
PRPF40B-204ENST00000527253 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-204ENST00000527253 RTEL1-TNFRSF6BF6WH68 1400 aa16.51■□□□□ 0.23
PRPF40B-204ENST00000527253 C3P01024 1663 aa16.5■□□□□ 0.23
PRPF40B-204ENST00000527253 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
PRPF40B-204ENST00000527253 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-204ENST00000527253 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
PRPF40B-204ENST00000527253 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-204ENST00000527253 PREX1Q8TCU6 1659 aa16.47■□□□□ 0.23
PRPF40B-204ENST00000527253 CNTLNQ9NXG0 1405 aa16.47■□□□□ 0.23
PRPF40B-204ENST00000527253 GGT6Q6P531 493 aa16.47■□□□□ 0.23
PRPF40B-204ENST00000527253 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-204ENST00000527253 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
PRPF40B-204ENST00000527253 ZMYM3Q14202 1370 aa16.46■□□□□ 0.23
PRPF40B-204ENST00000527253 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
PRPF40B-204ENST00000527253 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
PRPF40B-204ENST00000527253 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
PRPF40B-204ENST00000527253 TSPY4P0CV99 314 aa16.42■□□□□ 0.22
PRPF40B-204ENST00000527253 TSPY10P0CW01 314 aa16.42■□□□□ 0.22
PRPF40B-204ENST00000527253 MROH2AA6NES4 1674 aa16.42■□□□□ 0.22
PRPF40B-204ENST00000527253 CLTCQ00610 1675 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-204ENST00000527253 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
PRPF40B-204ENST00000527253 APLP2Q06481 763 aa16.41■□□□□ 0.22
PRPF40B-204ENST00000527253 KIF3BO15066 747 aa16.4■□□□□ 0.22
PRPF40B-204ENST00000527253 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
PRPF40B-204ENST00000527253 NPATQ14207 1427 aa16.39■□□□□ 0.21
PRPF40B-204ENST00000527253 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
PRPF40B-204ENST00000527253 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
PRPF40B-204ENST00000527253 MAST1Q9Y2H9 1570 aa16.37■□□□□ 0.21
PRPF40B-204ENST00000527253 ABCC5O15440 1437 aa16.35■□□□□ 0.21
PRPF40B-204ENST00000527253 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-204ENST00000527253 PTPN23Q9H3S7 1636 aa16.33■□□□□ 0.2
PRPF40B-204ENST00000527253 FGD6Q6ZV73 1430 aa16.32■□□□□ 0.2
PRPF40B-204ENST00000527253 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
PRPF40B-204ENST00000527253 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-204ENST00000527253 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms