RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 TIAM1Q13009 1591 aa17.82■□□□□ 0.44
CTSB-214ENST00000527243 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
CTSB-214ENST00000527243 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
CTSB-214ENST00000527243 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
CTSB-214ENST00000527243 RICTORQ6R327 1708 aa17.81■□□□□ 0.44
CTSB-214ENST00000527243 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
CTSB-214ENST00000527243 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
CTSB-214ENST00000527243 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
CTSB-214ENST00000527243 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
CTSB-214ENST00000527243 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
CTSB-214ENST00000527243 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
CTSB-214ENST00000527243 ARHGEF12Q9NZN5 1544 aa17.76■□□□□ 0.43
CTSB-214ENST00000527243 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
CTSB-214ENST00000527243 ABCC1P33527 1531 aa17.75■□□□□ 0.43
CTSB-214ENST00000527243 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
CTSB-214ENST00000527243 NCOA2Q15596 1464 aa17.74■□□□□ 0.43
CTSB-214ENST00000527243 MAGI2Q86UL8 1455 aa17.74■□□□□ 0.43
CTSB-214ENST00000527243 ARHGEF40Q8TER5 1519 aa17.72■□□□□ 0.43
CTSB-214ENST00000527243 KDM5CP41229 1560 aa17.72■□□□□ 0.43
CTSB-214ENST00000527243 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
CTSB-214ENST00000527243 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
CTSB-214ENST00000527243 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
CTSB-214ENST00000527243 SAMD9LQ8IVG5 1584 aa17.71■□□□□ 0.43
CTSB-214ENST00000527243 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
CTSB-214ENST00000527243 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
CTSB-214ENST00000527243 KIAA1107Q9UPP5 1409 aa17.71■□□□□ 0.43
CTSB-214ENST00000527243 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
CTSB-214ENST00000527243 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
CTSB-214ENST00000527243 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
CTSB-214ENST00000527243 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
CTSB-214ENST00000527243 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
CTSB-214ENST00000527243 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
CTSB-214ENST00000527243 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
CTSB-214ENST00000527243 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
CTSB-214ENST00000527243 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
CTSB-214ENST00000527243 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTSB-214ENST00000527243 ATP10AO60312 1499 aa17.63■□□□□ 0.41
CTSB-214ENST00000527243 HECW2Q9P2P5 1572 aa17.62■□□□□ 0.41
CTSB-214ENST00000527243 APLP2Q06481 763 aa17.61■□□□□ 0.41
CTSB-214ENST00000527243 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
CTSB-214ENST00000527243 SIGLEC1Q9BZZ2 1709 aa17.61■□□□□ 0.41
CTSB-214ENST00000527243 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
CTSB-214ENST00000527243 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
CTSB-214ENST00000527243 CAMSAP2Q08AD1 1489 aa17.59■□□□□ 0.41
CTSB-214ENST00000527243 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
CTSB-214ENST00000527243 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
CTSB-214ENST00000527243 MIA2Q96PC5 1412 aa17.58■□□□□ 0.41
CTSB-214ENST00000527243 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
CTSB-214ENST00000527243 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.4
CTSB-214ENST00000527243 ABCA6Q8N139 1617 aa17.58■□□□□ 0.4
CTSB-214ENST00000527243 BCORL1Q5H9F3 1711 aa17.56■□□□□ 0.4
CTSB-214ENST00000527243 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
CTSB-214ENST00000527243 INO80Q9ULG1 1556 aaPredicted RBP17.55■□□□□ 0.4
CTSB-214ENST00000527243 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
CTSB-214ENST00000527243 AGLP35573 1532 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
CTSB-214ENST00000527243 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
CTSB-214ENST00000527243 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
CTSB-214ENST00000527243 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
CTSB-214ENST00000527243 PTPRMP28827 1452 aa17.49■□□□□ 0.39
CTSB-214ENST00000527243 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
CTSB-214ENST00000527243 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
CTSB-214ENST00000527243 A2MP01023 1474 aa17.46■□□□□ 0.39
CTSB-214ENST00000527243 MLECQ14165 292 aa17.45■□□□□ 0.38
CTSB-214ENST00000527243 PTPN23Q9H3S7 1636 aa17.44■□□□□ 0.38
CTSB-214ENST00000527243 MAST1Q9Y2H9 1570 aa17.44■□□□□ 0.38
CTSB-214ENST00000527243 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
CTSB-214ENST00000527243 ABCC5O15440 1437 aa17.42■□□□□ 0.38
CTSB-214ENST00000527243 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
CTSB-214ENST00000527243 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
CTSB-214ENST00000527243 RIMS1Q86UR5 1692 aaKnown RBP17.4■□□□□ 0.38
CTSB-214ENST00000527243 ADGBQ8N7X0 1667 aa17.4■□□□□ 0.38
CTSB-214ENST00000527243 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
CTSB-214ENST00000527243 DAPK1P53355 1430 aa17.38■□□□□ 0.37
CTSB-214ENST00000527243 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
CTSB-214ENST00000527243 DNMT1P26358 1616 aaKnown RBP17.37■□□□□ 0.37
CTSB-214ENST00000527243 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
CTSB-214ENST00000527243 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
CTSB-214ENST00000527243 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.36
CTSB-214ENST00000527243 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
CTSB-214ENST00000527243 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
CTSB-214ENST00000527243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.365e-11■□□□□ 10.7
CTSB-214ENST00000527243 KIF3BO15066 747 aa17.3■□□□□ 0.36
CTSB-214ENST00000527243 GGT6Q6P531 493 aa17.3■□□□□ 0.36
CTSB-214ENST00000527243 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
CTSB-214ENST00000527243 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
CTSB-214ENST00000527243 KIF15Q9NS87 1388 aa17.29■□□□□ 0.36
CTSB-214ENST00000527243 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
CTSB-214ENST00000527243 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
CTSB-214ENST00000527243 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
CTSB-214ENST00000527243 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
CTSB-214ENST00000527243 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
CTSB-214ENST00000527243 ZMYM3Q14202 1370 aa17.27■□□□□ 0.35
CTSB-214ENST00000527243 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.35
CTSB-214ENST00000527243 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
CTSB-214ENST00000527243 RNF17Q9BXT8 1623 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms