RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 APLP2Q06481 763 aa26.12■■□□□ 1.77
SMCO4-204ENST00000527149 KDM6BO15054 1643 aa26.11■■□□□ 1.77
SMCO4-204ENST00000527149 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
SMCO4-204ENST00000527149 ITSN2Q9NZM3 1697 aa26.11■■□□□ 1.77
SMCO4-204ENST00000527149 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
SMCO4-204ENST00000527149 CCNB3Q8WWL7 1395 aa26.07■■□□□ 1.76
SMCO4-204ENST00000527149 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
SMCO4-204ENST00000527149 FRMPD1Q5SYB0 1578 aa26.04■■□□□ 1.76
SMCO4-204ENST00000527149 SAMD9LQ8IVG5 1584 aa26.04■■□□□ 1.76
SMCO4-204ENST00000527149 ABCC1P33527 1531 aa26.03■■□□□ 1.76
SMCO4-204ENST00000527149 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
SMCO4-204ENST00000527149 ADGRL1O94910 1474 aa26.02■■□□□ 1.76
SMCO4-204ENST00000527149 RICTORQ6R327 1708 aa26■■□□□ 1.75
SMCO4-204ENST00000527149 MYOM3Q5VTT5 1437 aa25.99■■□□□ 1.75
SMCO4-204ENST00000527149 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
SMCO4-204ENST00000527149 CFDP1Q9UEE9 299 aaPredicted RBP25.96■■□□□ 1.75
SMCO4-204ENST00000527149 DENND4BO75064 1496 aaPredicted RBP25.96■■□□□ 1.75
SMCO4-204ENST00000527149 POGZQ7Z3K3 1410 aa25.96■■□□□ 1.75
SMCO4-204ENST00000527149 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
SMCO4-204ENST00000527149 SYCP2Q9BX26 1530 aa25.93■■□□□ 1.74
SMCO4-204ENST00000527149 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
SMCO4-204ENST00000527149 ZMYM4Q5VZL5 1548 aa25.92■■□□□ 1.74
SMCO4-204ENST00000527149 CAMSAP2Q08AD1 1489 aa25.91■■□□□ 1.74
SMCO4-204ENST00000527149 KIAA1107Q9UPP5 1409 aa25.91■■□□□ 1.74
SMCO4-204ENST00000527149 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
SMCO4-204ENST00000527149 KDM5CP41229 1560 aa25.9■■□□□ 1.74
SMCO4-204ENST00000527149 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.74
SMCO4-204ENST00000527149 RAPGEF3O95398 923 aa25.89■■□□□ 1.74
SMCO4-204ENST00000527149 FGD6Q6ZV73 1430 aa25.88■■□□□ 1.73
SMCO4-204ENST00000527149 TRAPPC8Q9Y2L5 1435 aa25.88■■□□□ 1.73
SMCO4-204ENST00000527149 ZNF518AQ6AHZ1 1483 aa25.87■■□□□ 1.73
SMCO4-204ENST00000527149 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
SMCO4-204ENST00000527149 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
SMCO4-204ENST00000527149 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
SMCO4-204ENST00000527149 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
SMCO4-204ENST00000527149 TCOF1Q13428 1488 aaKnown RBP25.85■■□□□ 1.73
SMCO4-204ENST00000527149 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
SMCO4-204ENST00000527149 ARHGEF40Q8TER5 1519 aa25.81■■□□□ 1.72
SMCO4-204ENST00000527149 HECW2Q9P2P5 1572 aa25.8■■□□□ 1.72
SMCO4-204ENST00000527149 HNRNPMP52272 730 aaKnown RBP eCLIP25.78■■□□□ 1.729e-7■■■■■ 34
SMCO4-204ENST00000527149 AFAP1Q8N556 730 aa25.78■■□□□ 1.72
SMCO4-204ENST00000527149 MAGI2Q86UL8 1455 aa25.78■■□□□ 1.72
SMCO4-204ENST00000527149 CCDC141Q6ZP82 1450 aa25.77■■□□□ 1.72
SMCO4-204ENST00000527149 MLH3Q9UHC1 1453 aa25.77■■□□□ 1.72
SMCO4-204ENST00000527149 INO80Q9ULG1 1556 aaPredicted RBP25.77■■□□□ 1.72
SMCO4-204ENST00000527149 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
SMCO4-204ENST00000527149 ZFYVE16Q7Z3T8 1539 aa25.75■■□□□ 1.71
SMCO4-204ENST00000527149 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
SMCO4-204ENST00000527149 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
SMCO4-204ENST00000527149 CROCC2H7BZ55 1655 aa25.72■■□□□ 1.71
SMCO4-204ENST00000527149 DNMT1P26358 1616 aaKnown RBP25.72■■□□□ 1.71
SMCO4-204ENST00000527149 DIP2CQ9Y2E4 1556 aa25.71■■□□□ 1.71
SMCO4-204ENST00000527149 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
SMCO4-204ENST00000527149 ATP7AQ04656 1500 aa25.7■■□□□ 1.7
SMCO4-204ENST00000527149 MAST1Q9Y2H9 1570 aa25.69■■□□□ 1.7
SMCO4-204ENST00000527149 ABCC5O15440 1437 aa25.67■■□□□ 1.7
SMCO4-204ENST00000527149 SIGLEC1Q9BZZ2 1709 aa25.67■■□□□ 1.7
SMCO4-204ENST00000527149 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
SMCO4-204ENST00000527149 DAPK1P53355 1430 aa25.65■■□□□ 1.7
SMCO4-204ENST00000527149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.7
SMCO4-204ENST00000527149 SPAG9O60271 1321 aaKnown RBP25.64■■□□□ 1.7
SMCO4-204ENST00000527149 RTEL1-TNFRSF6BF6WH68 1400 aa25.64■■□□□ 1.7
SMCO4-204ENST00000527149 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
SMCO4-204ENST00000527149 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
SMCO4-204ENST00000527149 C9orf84Q5VXU9 1444 aa25.62■■□□□ 1.69
SMCO4-204ENST00000527149 ATP10AO60312 1499 aa25.61■■□□□ 1.69
SMCO4-204ENST00000527149 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
SMCO4-204ENST00000527149 FAM50AQ14320 339 aaKnown RBP25.59■■□□□ 1.69
SMCO4-204ENST00000527149 PLXNC1O60486 1568 aa25.59■■□□□ 1.69
SMCO4-204ENST00000527149 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
SMCO4-204ENST00000527149 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
SMCO4-204ENST00000527149 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
SMCO4-204ENST00000527149 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
SMCO4-204ENST00000527149 AGLP35573 1532 aa25.52■■□□□ 1.68
SMCO4-204ENST00000527149 A2MP01023 1474 aa25.51■■□□□ 1.67
SMCO4-204ENST00000527149 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
SMCO4-204ENST00000527149 BCORL1Q5H9F3 1711 aa25.48■■□□□ 1.67
SMCO4-204ENST00000527149 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
SMCO4-204ENST00000527149 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
SMCO4-204ENST00000527149 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
SMCO4-204ENST00000527149 DUOX2Q9NRD8 1548 aa25.43■■□□□ 1.66
SMCO4-204ENST00000527149 ADAMTSL3P82987 1691 aa25.43■■□□□ 1.66
SMCO4-204ENST00000527149 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
SMCO4-204ENST00000527149 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
SMCO4-204ENST00000527149 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
SMCO4-204ENST00000527149 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
SMCO4-204ENST00000527149 RNF17Q9BXT8 1623 aaKnown RBP25.37■■□□□ 1.65
SMCO4-204ENST00000527149 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
SMCO4-204ENST00000527149 ARID4BQ4LE39 1312 aaPredicted RBP25.37■■□□□ 1.65
SMCO4-204ENST00000527149 MADDQ8WXG6 1647 aa25.36■■□□□ 1.65
SMCO4-204ENST00000527149 KDM4FA0A1W2PPD8 638 aa25.35■■□□□ 1.65
SMCO4-204ENST00000527149 ITGAEP38570 1179 aa25.35■■□□□ 1.65
SMCO4-204ENST00000527149 RRP7BPQ9NSQ0 103 aa25.35■■□□□ 1.65
SMCO4-204ENST00000527149 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
SMCO4-204ENST00000527149 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
SMCO4-204ENST00000527149 DEPDC5O75140 1603 aa25.31■■□□□ 1.64
SMCO4-204ENST00000527149 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
SMCO4-204ENST00000527149 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
SMCO4-204ENST00000527149 MLECQ14165 292 aa25.28■■□□□ 1.64
SMCO4-204ENST00000527149 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms