RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 MYO5CQ9NQX4 1742 aa30.65■■■□□ 2.5
SMCO4-203ENST00000526869 CDC42BPBQ9Y5S2 1711 aa30.64■■■□□ 2.5
SMCO4-203ENST00000526869 CCER1Q8TC90 406 aaPredicted RBP30.63■■■□□ 2.49
SMCO4-203ENST00000526869 HFM1A2PYH4 1435 aa30.62■■■□□ 2.49
SMCO4-203ENST00000526869 DAPK1P53355 1430 aa30.62■■■□□ 2.49
SMCO4-203ENST00000526869 NPM1P06748 294 aaKnown RBP eCLIP30.6■■■□□ 2.49
SMCO4-203ENST00000526869 ASXL2Q76L83 1435 aa30.6■■■□□ 2.49
SMCO4-203ENST00000526869 ARAP3Q8WWN8 1544 aa30.6■■■□□ 2.49
SMCO4-203ENST00000526869 ABCC5O15440 1437 aa30.58■■■□□ 2.49
SMCO4-203ENST00000526869 RAB3GAP2Q9H2M9 1393 aa30.58■■■□□ 2.49
SMCO4-203ENST00000526869 ZNF644Q9H582 1327 aaPredicted RBP30.57■■■□□ 2.48
SMCO4-203ENST00000526869 CROCC2H7BZ55 1655 aa30.56■■■□□ 2.48
SMCO4-203ENST00000526869 ABCA9Q8IUA7 1624 aa30.56■■■□□ 2.48
SMCO4-203ENST00000526869 PLCH2O75038 1416 aa30.56■■■□□ 2.48
SMCO4-203ENST00000526869 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
SMCO4-203ENST00000526869 ARHGEF5Q12774 1597 aa30.55■■■□□ 2.48
SMCO4-203ENST00000526869 GCC2Q8IWJ2 1684 aa30.55■■■□□ 2.48
SMCO4-203ENST00000526869 SAMD9LQ8IVG5 1584 aa30.54■■■□□ 2.48
SMCO4-203ENST00000526869 ARHGAP5Q13017 1502 aa30.53■■■□□ 2.48
SMCO4-203ENST00000526869 KCNH8Q96L42 1107 aa30.53■■■□□ 2.48
SMCO4-203ENST00000526869 PLEKHH2Q8IVE3 1493 aa30.52■■■□□ 2.48
SMCO4-203ENST00000526869 SHANK2Q9UPX8 1470 aa30.51■■■□□ 2.48
SMCO4-203ENST00000526869 NAIPQ13075 1403 aa30.51■■■□□ 2.47
SMCO4-203ENST00000526869 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
SMCO4-203ENST00000526869 MAPKBP1O60336 1514 aa30.49■■■□□ 2.47
SMCO4-203ENST00000526869 ZNF777Q9ULD5 760 aaPredicted RBP30.48■■■□□ 2.47
SMCO4-203ENST00000526869 ADGRL2O95490 1459 aa30.47■■■□□ 2.47
SMCO4-203ENST00000526869 DHX57Q6P158 1386 aaKnown RBP30.46■■■□□ 2.47
SMCO4-203ENST00000526869 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
SMCO4-203ENST00000526869 CLSPNQ9HAW4 1339 aa30.46■■■□□ 2.47
SMCO4-203ENST00000526869 MBD5Q9P267 1494 aa30.44■■■□□ 2.46
SMCO4-203ENST00000526869 RSPH4AQ5TD94 716 aa30.42■■■□□ 2.46
SMCO4-203ENST00000526869 CYB5RLQ6IPT4 315 aa30.42■■■□□ 2.46
SMCO4-203ENST00000526869 CCDC141Q6ZP82 1450 aa30.42■■■□□ 2.46
SMCO4-203ENST00000526869 EFCAB2Q5VUJ9 269 aa30.4■■■□□ 2.46
SMCO4-203ENST00000526869 ACIN1Q9UKV3 1341 aaKnown RBP30.4■■■□□ 2.46
SMCO4-203ENST00000526869 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
SMCO4-203ENST00000526869 ABCC1P33527 1531 aa30.37■■■□□ 2.45
SMCO4-203ENST00000526869 CHIC2Q9UKJ5 165 aa30.37■■■□□ 2.45
SMCO4-203ENST00000526869 MAST1Q9Y2H9 1570 aa30.37■■■□□ 2.45
SMCO4-203ENST00000526869 NCOA1Q15788 1441 aa30.35■■■□□ 2.45
SMCO4-203ENST00000526869 C9orf84Q5VXU9 1444 aa30.35■■■□□ 2.45
SMCO4-203ENST00000526869 ANKRD30AQ9BXX3 1397 aa30.33■■■□□ 2.45
SMCO4-203ENST00000526869 RRP7BPQ9NSQ0 103 aa30.33■■■□□ 2.45
SMCO4-203ENST00000526869 HNRNPMP52272 730 aaKnown RBP eCLIP30.3■■■□□ 2.448e-7■■■■■ 34.2
SMCO4-203ENST00000526869 FANCAO15360 1455 aa30.3■■■□□ 2.44
SMCO4-203ENST00000526869 CFAP74Q9C0B2 1584 aa30.29■■■□□ 2.44
SMCO4-203ENST00000526869 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
SMCO4-203ENST00000526869 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
SMCO4-203ENST00000526869 GLI2P10070 1586 aa30.28■■■□□ 2.44
SMCO4-203ENST00000526869 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
SMCO4-203ENST00000526869 KDM6BO15054 1643 aa30.25■■■□□ 2.43
SMCO4-203ENST00000526869 CD109Q6YHK3 1445 aa30.23■■■□□ 2.43
SMCO4-203ENST00000526869 PLXNC1O60486 1568 aa30.23■■■□□ 2.43
SMCO4-203ENST00000526869 MAP3K4Q9Y6R4 1608 aa30.19■■■□□ 2.42
SMCO4-203ENST00000526869 ADGRL1O94910 1474 aa30.16■■■□□ 2.42
SMCO4-203ENST00000526869 DIP2BQ9P265 1576 aa30.15■■■□□ 2.42
SMCO4-203ENST00000526869 KIF15Q9NS87 1388 aa30.15■■■□□ 2.42
SMCO4-203ENST00000526869 ANKRD50Q9ULJ7 1429 aa30.14■■■□□ 2.42
SMCO4-203ENST00000526869 TRAPPC8Q9Y2L5 1435 aa30.14■■■□□ 2.42
SMCO4-203ENST00000526869 RTEL1-TNFRSF6BF6WH68 1400 aa30.13■■■□□ 2.41
SMCO4-203ENST00000526869 NEO1Q92859 1461 aa30.13■■■□□ 2.41
SMCO4-203ENST00000526869 SCAPERQ9BY12 1400 aa30.09■■■□□ 2.41
SMCO4-203ENST00000526869 ZFYVE16Q7Z3T8 1539 aa30.08■■■□□ 2.41
SMCO4-203ENST00000526869 INO80Q9ULG1 1556 aaPredicted RBP30.07■■■□□ 2.4
SMCO4-203ENST00000526869 DUOX2Q9NRD8 1548 aa30.06■■■□□ 2.4
SMCO4-203ENST00000526869 ZNF518AQ6AHZ1 1483 aa30.04■■■□□ 2.4
SMCO4-203ENST00000526869 SPAG9O60271 1321 aaKnown RBP30.03■■■□□ 2.4
SMCO4-203ENST00000526869 KDM5DQ9BY66 1539 aa30.03■■■□□ 2.4
SMCO4-203ENST00000526869 TRIM52Q96A61 297 aa30.02■■■□□ 2.4
SMCO4-203ENST00000526869 ATP7AQ04656 1500 aa30.01■■■□□ 2.4
SMCO4-203ENST00000526869 ERBINQ96RT1 1412 aa30.01■■■□□ 2.39
SMCO4-203ENST00000526869 DENND4BO75064 1496 aaPredicted RBP29.99■■■□□ 2.39
SMCO4-203ENST00000526869 KDM5CP41229 1560 aa29.99■■■□□ 2.39
SMCO4-203ENST00000526869 POGZQ7Z3K3 1410 aa29.99■■■□□ 2.39
SMCO4-203ENST00000526869 PZPP20742 1482 aa29.98■■■□□ 2.39
SMCO4-203ENST00000526869 AFAP1Q8N556 730 aa29.97■■■□□ 2.39
SMCO4-203ENST00000526869 UNC13BO14795 1591 aa29.96■■■□□ 2.39
SMCO4-203ENST00000526869 MPHOSPH9Q99550 1183 aa29.96■■■□□ 2.39
SMCO4-203ENST00000526869 FAM69CQ0P6D2 419 aa29.95■■■□□ 2.39
SMCO4-203ENST00000526869 TEX14Q8IWB6 1497 aa29.93■■■□□ 2.38
SMCO4-203ENST00000526869 TIMELESSQ9UNS1 1208 aa29.91■■■□□ 2.38
SMCO4-203ENST00000526869 MLH3Q9UHC1 1453 aa29.91■■■□□ 2.38
SMCO4-203ENST00000526869 KIF13AQ9H1H9 1805 aa29.91■■■□□ 2.38
SMCO4-203ENST00000526869 PPRC1Q5VV67 1664 aaKnown RBP29.91■■■□□ 2.38
SMCO4-203ENST00000526869 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
SMCO4-203ENST00000526869 MAGI2Q86UL8 1455 aa29.89■■■□□ 2.38
SMCO4-203ENST00000526869 HECW2Q9P2P5 1572 aa29.88■■■□□ 2.37
SMCO4-203ENST00000526869 EIF2AK4Q9P2K8 1649 aaKnown RBP29.86■■■□□ 2.37
SMCO4-203ENST00000526869 RICTORQ6R327 1708 aa29.86■■■□□ 2.37
SMCO4-203ENST00000526869 SLC4A1APQ9BWU0 796 aaKnown RBP29.86■■■□□ 2.37
SMCO4-203ENST00000526869 NUP155O75694 1391 aa29.85■■■□□ 2.37
SMCO4-203ENST00000526869 IQGAP3Q86VI3 1631 aa29.82■■■□□ 2.36
SMCO4-203ENST00000526869 DEPDC5O75140 1603 aa29.81■■■□□ 2.36
SMCO4-203ENST00000526869 DHX29Q7Z478 1369 aaKnown RBP29.8■■■□□ 2.36
SMCO4-203ENST00000526869 SIN3AQ96ST3 1273 aa29.8■■■□□ 2.36
SMCO4-203ENST00000526869 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
SMCO4-203ENST00000526869 ANKRD30BQ9BXX2 1392 aa29.79■■■□□ 2.36
SMCO4-203ENST00000526869 ZMYM4Q5VZL5 1548 aa29.78■■■□□ 2.36
SMCO4-203ENST00000526869 TSPOAP1O95153 1857 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms