RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
COMMD9-204ENST00000526789 UHRF1BP1LA0JNW5 1464 aa12.49□□□□□ -0.41
COMMD9-204ENST00000526789 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
COMMD9-204ENST00000526789 KIF21BO75037 1637 aa12.48□□□□□ -0.41
COMMD9-204ENST00000526789 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
COMMD9-204ENST00000526789 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
COMMD9-204ENST00000526789 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 KDM5BQ9UGL1 1544 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 WDR7Q9Y4E6 1490 aa12.45□□□□□ -0.42
COMMD9-204ENST00000526789 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
COMMD9-204ENST00000526789 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
COMMD9-204ENST00000526789 DISP1Q96F81 1524 aa12.41□□□□□ -0.42
COMMD9-204ENST00000526789 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
COMMD9-204ENST00000526789 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
COMMD9-204ENST00000526789 PROM2Q8N271 834 aa12.4□□□□□ -0.42
COMMD9-204ENST00000526789 PTPRMP28827 1452 aa12.4□□□□□ -0.43
COMMD9-204ENST00000526789 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
COMMD9-204ENST00000526789 FAM9AQ8IZU1 332 aaPredicted RBP12.39□□□□□ -0.43
COMMD9-204ENST00000526789 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
COMMD9-204ENST00000526789 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
COMMD9-204ENST00000526789 HSPA2P54652 639 aa12.36□□□□□ -0.43
COMMD9-204ENST00000526789 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
COMMD9-204ENST00000526789 PCF11O94913 1555 aaKnown RBP12.35□□□□□ -0.43
COMMD9-204ENST00000526789 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
COMMD9-204ENST00000526789 UGGT2Q9NYU1 1516 aa12.33□□□□□ -0.44
COMMD9-204ENST00000526789 SOCS7O14512 581 aa12.33□□□□□ -0.44
COMMD9-204ENST00000526789 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
COMMD9-204ENST00000526789 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
COMMD9-204ENST00000526789 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
COMMD9-204ENST00000526789 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
COMMD9-204ENST00000526789 MADDQ8WXG6 1647 aa12.3□□□□□ -0.44
COMMD9-204ENST00000526789 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
COMMD9-204ENST00000526789 RIMS1Q86UR5 1692 aaKnown RBP12.29□□□□□ -0.44
COMMD9-204ENST00000526789 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
COMMD9-204ENST00000526789 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
COMMD9-204ENST00000526789 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-204ENST00000526789 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
COMMD9-204ENST00000526789 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
COMMD9-204ENST00000526789 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
COMMD9-204ENST00000526789 MLECQ14165 292 aa12.27□□□□□ -0.45
COMMD9-204ENST00000526789 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-204ENST00000526789 ABCA8O94911 1581 aa12.24□□□□□ -0.45
COMMD9-204ENST00000526789 CTTNBP2Q8WZ74 1663 aa12.24□□□□□ -0.45
COMMD9-204ENST00000526789 PHLDB1Q86UU1 1377 aa12.23□□□□□ -0.45
COMMD9-204ENST00000526789 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
COMMD9-204ENST00000526789 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
COMMD9-204ENST00000526789 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
COMMD9-204ENST00000526789 SPATA31D1Q6ZQQ2 1576 aa12.19□□□□□ -0.46
COMMD9-204ENST00000526789 RANGAP1P46060 587 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-204ENST00000526789 NEO1Q92859 1461 aa12.19□□□□□ -0.46
COMMD9-204ENST00000526789 FANCAO15360 1455 aa12.18□□□□□ -0.46
COMMD9-204ENST00000526789 ATP10BO94823 1461 aa12.18□□□□□ -0.46
COMMD9-204ENST00000526789 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
COMMD9-204ENST00000526789 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
COMMD9-204ENST00000526789 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
COMMD9-204ENST00000526789 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
COMMD9-204ENST00000526789 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
COMMD9-204ENST00000526789 DENND4BO75064 1496 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-204ENST00000526789 FRMPD1Q5SYB0 1578 aa12.15□□□□□ -0.46
COMMD9-204ENST00000526789 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
COMMD9-204ENST00000526789 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
COMMD9-204ENST00000526789 CLCN6P51797 869 aa12.14□□□□□ -0.47
COMMD9-204ENST00000526789 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
COMMD9-204ENST00000526789 POTEMA6NI47 508 aa12.13□□□□□ -0.47
COMMD9-204ENST00000526789 PLEKHD1A6NEE1 506 aa12.12□□□□□ -0.47
COMMD9-204ENST00000526789 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
COMMD9-204ENST00000526789 ZFYVE16Q7Z3T8 1539 aa12.11□□□□□ -0.47
COMMD9-204ENST00000526789 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
COMMD9-204ENST00000526789 YEATS2Q9ULM3 1422 aa12.1□□□□□ -0.47
COMMD9-204ENST00000526789 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
COMMD9-204ENST00000526789 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
COMMD9-204ENST00000526789 RICTORQ6R327 1708 aa12.08□□□□□ -0.47
COMMD9-204ENST00000526789 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
COMMD9-204ENST00000526789 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
COMMD9-204ENST00000526789 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
COMMD9-204ENST00000526789 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
COMMD9-204ENST00000526789 UHRF1BP1Q6BDS2 1440 aa12.06□□□□□ -0.48
COMMD9-204ENST00000526789 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-204ENST00000526789 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
COMMD9-204ENST00000526789 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
COMMD9-204ENST00000526789 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
COMMD9-204ENST00000526789 SIGLEC1Q9BZZ2 1709 aa12.03□□□□□ -0.48
COMMD9-204ENST00000526789 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
COMMD9-204ENST00000526789 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
COMMD9-204ENST00000526789 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-204ENST00000526789 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
COMMD9-204ENST00000526789 SCAPERQ9BY12 1400 aa12.02□□□□□ -0.49
COMMD9-204ENST00000526789 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
COMMD9-204ENST00000526789 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
COMMD9-204ENST00000526789 C9orf84Q5VXU9 1444 aa12□□□□□ -0.49
COMMD9-204ENST00000526789 ATP10AO60312 1499 aa12□□□□□ -0.49
COMMD9-204ENST00000526789 NUP153P49790 1475 aaKnown RBP12□□□□□ -0.49
COMMD9-204ENST00000526789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
COMMD9-204ENST00000526789 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
COMMD9-204ENST00000526789 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
COMMD9-204ENST00000526789 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
COMMD9-204ENST00000526789 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms