RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
SNRNP35-203ENST00000526639 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
SNRNP35-203ENST00000526639 RICTORQ6R327 1708 aa17.73■□□□□ 0.43
SNRNP35-203ENST00000526639 MTUS2Q5JR59 1369 aa17.71■□□□□ 0.43
SNRNP35-203ENST00000526639 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
SNRNP35-203ENST00000526639 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
SNRNP35-203ENST00000526639 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
SNRNP35-203ENST00000526639 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
SNRNP35-203ENST00000526639 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
SNRNP35-203ENST00000526639 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
SNRNP35-203ENST00000526639 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
SNRNP35-203ENST00000526639 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
SNRNP35-203ENST00000526639 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
SNRNP35-203ENST00000526639 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.42
SNRNP35-203ENST00000526639 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
SNRNP35-203ENST00000526639 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
SNRNP35-203ENST00000526639 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
SNRNP35-203ENST00000526639 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
SNRNP35-203ENST00000526639 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
SNRNP35-203ENST00000526639 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
SNRNP35-203ENST00000526639 ZNF518AQ6AHZ1 1483 aa17.62■□□□□ 0.41
SNRNP35-203ENST00000526639 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
SNRNP35-203ENST00000526639 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
SNRNP35-203ENST00000526639 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
SNRNP35-203ENST00000526639 TRAPPC8Q9Y2L5 1435 aa17.6■□□□□ 0.41
SNRNP35-203ENST00000526639 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNRNP35-203ENST00000526639 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
SNRNP35-203ENST00000526639 ABCC1P33527 1531 aa17.59■□□□□ 0.41
SNRNP35-203ENST00000526639 SAMD9LQ8IVG5 1584 aa17.58■□□□□ 0.4
SNRNP35-203ENST00000526639 SIGLEC1Q9BZZ2 1709 aa17.57■□□□□ 0.4
SNRNP35-203ENST00000526639 MLECQ14165 292 aa17.57■□□□□ 0.4
SNRNP35-203ENST00000526639 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-203ENST00000526639 KDM5CP41229 1560 aa17.56■□□□□ 0.4
SNRNP35-203ENST00000526639 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-203ENST00000526639 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
SNRNP35-203ENST00000526639 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
SNRNP35-203ENST00000526639 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
SNRNP35-203ENST00000526639 ATP10AO60312 1499 aa17.54■□□□□ 0.4
SNRNP35-203ENST00000526639 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
SNRNP35-203ENST00000526639 LRRC9Q6ZRR7 1453 aa17.53■□□□□ 0.4
SNRNP35-203ENST00000526639 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
SNRNP35-203ENST00000526639 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
SNRNP35-203ENST00000526639 SUPT6HQ7KZ85 1726 aaKnown RBP17.53■□□□□ 0.4
SNRNP35-203ENST00000526639 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
SNRNP35-203ENST00000526639 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
SNRNP35-203ENST00000526639 MADDQ8WXG6 1647 aa17.51■□□□□ 0.39
SNRNP35-203ENST00000526639 APLP2Q06481 763 aa17.5■□□□□ 0.39
SNRNP35-203ENST00000526639 PTPRMP28827 1452 aa17.5■□□□□ 0.39
SNRNP35-203ENST00000526639 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
SNRNP35-203ENST00000526639 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
SNRNP35-203ENST00000526639 KIAA1107Q9UPP5 1409 aa17.49■□□□□ 0.39
SNRNP35-203ENST00000526639 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-203ENST00000526639 ABCA6Q8N139 1617 aa17.49■□□□□ 0.39
SNRNP35-203ENST00000526639 PLEKHH2Q8IVE3 1493 aa17.48■□□□□ 0.39
SNRNP35-203ENST00000526639 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
SNRNP35-203ENST00000526639 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
SNRNP35-203ENST00000526639 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
SNRNP35-203ENST00000526639 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
SNRNP35-203ENST00000526639 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
SNRNP35-203ENST00000526639 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
SNRNP35-203ENST00000526639 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
SNRNP35-203ENST00000526639 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
SNRNP35-203ENST00000526639 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
SNRNP35-203ENST00000526639 INO80Q9ULG1 1556 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-203ENST00000526639 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-203ENST00000526639 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
SNRNP35-203ENST00000526639 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
SNRNP35-203ENST00000526639 AGLP35573 1532 aa17.36■□□□□ 0.37
SNRNP35-203ENST00000526639 RSPH4AQ5TD94 716 aa17.35■□□□□ 0.37
SNRNP35-203ENST00000526639 A2MP01023 1474 aa17.35■□□□□ 0.37
SNRNP35-203ENST00000526639 FOXD1Q16676 465 aa17.35■□□□□ 0.37
SNRNP35-203ENST00000526639 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
SNRNP35-203ENST00000526639 TSPY4P0CV99 314 aa17.34■□□□□ 0.37
SNRNP35-203ENST00000526639 TSPY10P0CW01 314 aa17.34■□□□□ 0.37
SNRNP35-203ENST00000526639 MIA2Q96PC5 1412 aa17.33■□□□□ 0.37
SNRNP35-203ENST00000526639 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.36
SNRNP35-203ENST00000526639 GGT6Q6P531 493 aa17.33■□□□□ 0.36
SNRNP35-203ENST00000526639 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
SNRNP35-203ENST00000526639 ARHGEF5Q12774 1597 aa17.3■□□□□ 0.36
SNRNP35-203ENST00000526639 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
SNRNP35-203ENST00000526639 LMTK3Q96Q04 1460 aa17.29■□□□□ 0.36
SNRNP35-203ENST00000526639 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SNRNP35-203ENST00000526639 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
SNRNP35-203ENST00000526639 HSPA2P54652 639 aa17.28■□□□□ 0.36
SNRNP35-203ENST00000526639 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
SNRNP35-203ENST00000526639 KIF3BO15066 747 aa17.26■□□□□ 0.35
SNRNP35-203ENST00000526639 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
SNRNP35-203ENST00000526639 C3P01024 1663 aa17.24■□□□□ 0.35
SNRNP35-203ENST00000526639 ZMYM3Q14202 1370 aa17.23■□□□□ 0.35
SNRNP35-203ENST00000526639 CNTLNQ9NXG0 1405 aa17.23■□□□□ 0.35
SNRNP35-203ENST00000526639 ABCC5O15440 1437 aa17.22■□□□□ 0.35
SNRNP35-203ENST00000526639 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
SNRNP35-203ENST00000526639 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
SNRNP35-203ENST00000526639 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
SNRNP35-203ENST00000526639 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
SNRNP35-203ENST00000526639 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-203ENST00000526639 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
SNRNP35-203ENST00000526639 DAPK1P53355 1430 aa17.19■□□□□ 0.34
SNRNP35-203ENST00000526639 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
SNRNP35-203ENST00000526639 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms