RNA–Protein interactions for RNA: ENST00000526567.5

ATM-209, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene ATM, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-209ENST00000526567 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
ATM-209ENST00000526567 MAPKBP1O60336 1514 aa13.66□□□□□ -0.22
ATM-209ENST00000526567 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
ATM-209ENST00000526567 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
ATM-209ENST00000526567 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
ATM-209ENST00000526567 KCNH8Q96L42 1107 aa13.64□□□□□ -0.23
ATM-209ENST00000526567 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
ATM-209ENST00000526567 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
ATM-209ENST00000526567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
ATM-209ENST00000526567 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
ATM-209ENST00000526567 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
ATM-209ENST00000526567 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
ATM-209ENST00000526567 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
ATM-209ENST00000526567 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
ATM-209ENST00000526567 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
ATM-209ENST00000526567 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
ATM-209ENST00000526567 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
ATM-209ENST00000526567 PLCH2O75038 1416 aa13.58□□□□□ -0.24
ATM-209ENST00000526567 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
ATM-209ENST00000526567 ITGAEP38570 1179 aa13.58□□□□□ -0.24
ATM-209ENST00000526567 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
ATM-209ENST00000526567 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
ATM-209ENST00000526567 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
ATM-209ENST00000526567 DIP2BQ9P265 1576 aa13.56□□□□□ -0.24
ATM-209ENST00000526567 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
ATM-209ENST00000526567 DAPK1P53355 1430 aa13.55□□□□□ -0.24
ATM-209ENST00000526567 ABCC5O15440 1437 aa13.54□□□□□ -0.24
ATM-209ENST00000526567 GLI2P10070 1586 aa13.54□□□□□ -0.24
ATM-209ENST00000526567 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
ATM-209ENST00000526567 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
ATM-209ENST00000526567 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
ATM-209ENST00000526567 MBD5Q9P267 1494 aa13.52□□□□□ -0.25
ATM-209ENST00000526567 ABCC1P33527 1531 aa13.52□□□□□ -0.25
ATM-209ENST00000526567 ARHGEF12Q9NZN5 1544 aa13.52□□□□□ -0.25
ATM-209ENST00000526567 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
ATM-209ENST00000526567 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
ATM-209ENST00000526567 FANCAO15360 1455 aa13.5□□□□□ -0.25
ATM-209ENST00000526567 CD109Q6YHK3 1445 aa13.5□□□□□ -0.25
ATM-209ENST00000526567 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
ATM-209ENST00000526567 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
ATM-209ENST00000526567 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
ATM-209ENST00000526567 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
ATM-209ENST00000526567 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
ATM-209ENST00000526567 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
ATM-209ENST00000526567 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■■□□ 18.1
ATM-209ENST00000526567 KIF13AQ9H1H9 1805 aa13.47□□□□□ -0.25
ATM-209ENST00000526567 FAM69CQ0P6D2 419 aa13.46□□□□□ -0.25
ATM-209ENST00000526567 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
ATM-209ENST00000526567 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
ATM-209ENST00000526567 HFM1A2PYH4 1435 aa13.46□□□□□ -0.26
ATM-209ENST00000526567 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.26
ATM-209ENST00000526567 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 ADGRL2O95490 1459 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 NAIPQ13075 1403 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
ATM-209ENST00000526567 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
ATM-209ENST00000526567 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
ATM-209ENST00000526567 MAST1Q9Y2H9 1570 aa13.43□□□□□ -0.26
ATM-209ENST00000526567 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
ATM-209ENST00000526567 KDM6BO15054 1643 aa13.42□□□□□ -0.26
ATM-209ENST00000526567 NEO1Q92859 1461 aa13.42□□□□□ -0.26
ATM-209ENST00000526567 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
ATM-209ENST00000526567 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
ATM-209ENST00000526567 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
ATM-209ENST00000526567 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
ATM-209ENST00000526567 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
ATM-209ENST00000526567 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
ATM-209ENST00000526567 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
ATM-209ENST00000526567 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
ATM-209ENST00000526567 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
ATM-209ENST00000526567 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
ATM-209ENST00000526567 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 KDM5CP41229 1560 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
ATM-209ENST00000526567 KIF15Q9NS87 1388 aa13.36□□□□□ -0.27
ATM-209ENST00000526567 TSPY4P0CV99 314 aa13.36□□□□□ -0.27
ATM-209ENST00000526567 TSPY10P0CW01 314 aa13.36□□□□□ -0.27
ATM-209ENST00000526567 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
ATM-209ENST00000526567 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
ATM-209ENST00000526567 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
ATM-209ENST00000526567 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
ATM-209ENST00000526567 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
ATM-209ENST00000526567 RICTORQ6R327 1708 aa13.34□□□□□ -0.27
ATM-209ENST00000526567 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
ATM-209ENST00000526567 RTEL1-TNFRSF6BF6WH68 1400 aa13.33□□□□□ -0.28
ATM-209ENST00000526567 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
ATM-209ENST00000526567 KIDINS220Q9ULH0 1771 aa13.32□□□□□ -0.28
ATM-209ENST00000526567 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
ATM-209ENST00000526567 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
ATM-209ENST00000526567 HRCP23327 699 aa13.31□□□□□ -0.28
ATM-209ENST00000526567 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
ATM-209ENST00000526567 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
ATM-209ENST00000526567 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
ATM-209ENST00000526567 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms