RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 POGZQ7Z3K3 1410 aa18.07■□□□□ 0.48
AMBRA1-204ENST00000526545 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
AMBRA1-204ENST00000526545 MYO5CQ9NQX4 1742 aa18.07■□□□□ 0.48
AMBRA1-204ENST00000526545 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
AMBRA1-204ENST00000526545 YEATS2Q9ULM3 1422 aa18.04■□□□□ 0.48
AMBRA1-204ENST00000526545 MADDQ8WXG6 1647 aa18.03■□□□□ 0.48
AMBRA1-204ENST00000526545 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
AMBRA1-204ENST00000526545 ARHGAP5Q13017 1502 aa18.02■□□□□ 0.47
AMBRA1-204ENST00000526545 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
AMBRA1-204ENST00000526545 ATP10AO60312 1499 aa18.01■□□□□ 0.47
AMBRA1-204ENST00000526545 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
AMBRA1-204ENST00000526545 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
AMBRA1-204ENST00000526545 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
AMBRA1-204ENST00000526545 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
AMBRA1-204ENST00000526545 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
AMBRA1-204ENST00000526545 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
AMBRA1-204ENST00000526545 KDM5CP41229 1560 aa17.95■□□□□ 0.46
AMBRA1-204ENST00000526545 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
AMBRA1-204ENST00000526545 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
AMBRA1-204ENST00000526545 MLECQ14165 292 aa17.93■□□□□ 0.46
AMBRA1-204ENST00000526545 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
AMBRA1-204ENST00000526545 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
AMBRA1-204ENST00000526545 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
AMBRA1-204ENST00000526545 MLH3Q9UHC1 1453 aa17.91■□□□□ 0.46
AMBRA1-204ENST00000526545 ARHGEF12Q9NZN5 1544 aa17.9■□□□□ 0.46
AMBRA1-204ENST00000526545 ABCC1P33527 1531 aa17.89■□□□□ 0.45
AMBRA1-204ENST00000526545 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
AMBRA1-204ENST00000526545 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
AMBRA1-204ENST00000526545 TRAPPC8Q9Y2L5 1435 aa17.87■□□□□ 0.45
AMBRA1-204ENST00000526545 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
AMBRA1-204ENST00000526545 DIP2CQ9Y2E4 1556 aa17.86■□□□□ 0.45
AMBRA1-204ENST00000526545 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
AMBRA1-204ENST00000526545 ITSN2Q9NZM3 1697 aa17.84■□□□□ 0.45
AMBRA1-204ENST00000526545 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
AMBRA1-204ENST00000526545 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
AMBRA1-204ENST00000526545 AGLP35573 1532 aa17.82■□□□□ 0.44
AMBRA1-204ENST00000526545 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
AMBRA1-204ENST00000526545 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
AMBRA1-204ENST00000526545 ABCA6Q8N139 1617 aa17.82■□□□□ 0.44
AMBRA1-204ENST00000526545 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
AMBRA1-204ENST00000526545 HSPA2P54652 639 aa17.81■□□□□ 0.44
AMBRA1-204ENST00000526545 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
AMBRA1-204ENST00000526545 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
AMBRA1-204ENST00000526545 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
AMBRA1-204ENST00000526545 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
AMBRA1-204ENST00000526545 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
AMBRA1-204ENST00000526545 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
AMBRA1-204ENST00000526545 KIDINS220Q9ULH0 1771 aa17.79■□□□□ 0.44
AMBRA1-204ENST00000526545 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
AMBRA1-204ENST00000526545 HNRNPMP52272 730 aaKnown RBP eCLIP17.78■□□□□ 0.44
AMBRA1-204ENST00000526545 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
AMBRA1-204ENST00000526545 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.43
AMBRA1-204ENST00000526545 PREX1Q8TCU6 1659 aa17.75■□□□□ 0.43
AMBRA1-204ENST00000526545 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
AMBRA1-204ENST00000526545 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
AMBRA1-204ENST00000526545 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
AMBRA1-204ENST00000526545 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
AMBRA1-204ENST00000526545 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
AMBRA1-204ENST00000526545 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
AMBRA1-204ENST00000526545 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
AMBRA1-204ENST00000526545 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
AMBRA1-204ENST00000526545 C3P01024 1663 aa17.68■□□□□ 0.42
AMBRA1-204ENST00000526545 A2MP01023 1474 aa17.68■□□□□ 0.42
AMBRA1-204ENST00000526545 ZNF644Q9H582 1327 aaPredicted RBP17.68■□□□□ 0.42
AMBRA1-204ENST00000526545 MBD5Q9P267 1494 aa17.67■□□□□ 0.42
AMBRA1-204ENST00000526545 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
AMBRA1-204ENST00000526545 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
AMBRA1-204ENST00000526545 RTEL1-TNFRSF6BF6WH68 1400 aa17.65■□□□□ 0.42
AMBRA1-204ENST00000526545 PLXNC1O60486 1568 aa17.65■□□□□ 0.42
AMBRA1-204ENST00000526545 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
AMBRA1-204ENST00000526545 NPATQ14207 1427 aa17.64■□□□□ 0.42
AMBRA1-204ENST00000526545 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
AMBRA1-204ENST00000526545 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
AMBRA1-204ENST00000526545 NCOA2Q15596 1464 aa17.63■□□□□ 0.41
AMBRA1-204ENST00000526545 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
AMBRA1-204ENST00000526545 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
AMBRA1-204ENST00000526545 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
AMBRA1-204ENST00000526545 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
AMBRA1-204ENST00000526545 GGT6Q6P531 493 aa17.61■□□□□ 0.41
AMBRA1-204ENST00000526545 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
AMBRA1-204ENST00000526545 STRCQ7RTU9 1775 aa17.6■□□□□ 0.41
AMBRA1-204ENST00000526545 CCDC141Q6ZP82 1450 aa17.58■□□□□ 0.41
AMBRA1-204ENST00000526545 PTPRTO14522 1441 aa17.58■□□□□ 0.41
AMBRA1-204ENST00000526545 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
AMBRA1-204ENST00000526545 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
AMBRA1-204ENST00000526545 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
AMBRA1-204ENST00000526545 TSPY4P0CV99 314 aa17.56■□□□□ 0.4
AMBRA1-204ENST00000526545 TSPY10P0CW01 314 aa17.56■□□□□ 0.4
AMBRA1-204ENST00000526545 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
AMBRA1-204ENST00000526545 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
AMBRA1-204ENST00000526545 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
AMBRA1-204ENST00000526545 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
AMBRA1-204ENST00000526545 KIF3BO15066 747 aa17.52■□□□□ 0.4
AMBRA1-204ENST00000526545 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
AMBRA1-204ENST00000526545 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
AMBRA1-204ENST00000526545 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
AMBRA1-204ENST00000526545 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
AMBRA1-204ENST00000526545 PKD2Q13563 968 aa17.48■□□□□ 0.39
AMBRA1-204ENST00000526545 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
AMBRA1-204ENST00000526545 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms