RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 CDC42BPAQ5VT25 1732 aa33.53■■■□□ 2.96
ME3-205ENST00000526504 ITSN2Q9NZM3 1697 aa33.51■■■□□ 2.95
ME3-205ENST00000526504 PREX2Q70Z35 1606 aa33.51■■■□□ 2.95
ME3-205ENST00000526504 CFDP1Q9UEE9 299 aaPredicted RBP33.49■■■□□ 2.95
ME3-205ENST00000526504 ARAP3Q8WWN8 1544 aa33.48■■■□□ 2.95
ME3-205ENST00000526504 ARHGAP5Q13017 1502 aa33.47■■■□□ 2.95
ME3-205ENST00000526504 CDC42BPBQ9Y5S2 1711 aa33.46■■■□□ 2.95
ME3-205ENST00000526504 EFCAB2Q5VUJ9 269 aa33.44■■■□□ 2.94
ME3-205ENST00000526504 MIA2Q96PC5 1412 aa33.43■■■□□ 2.94
ME3-205ENST00000526504 FGD6Q6ZV73 1430 aa33.43■■■□□ 2.94
ME3-205ENST00000526504 TSPOAP1O95153 1857 aa33.42■■■□□ 2.94
ME3-205ENST00000526504 FANCAO15360 1455 aa33.42■■■□□ 2.94
ME3-205ENST00000526504 ZNF777Q9ULD5 760 aaPredicted RBP33.39■■■□□ 2.94
ME3-205ENST00000526504 TEX14Q8IWB6 1497 aa33.39■■■□□ 2.94
ME3-205ENST00000526504 PPRC1Q5VV67 1664 aaKnown RBP33.38■■■□□ 2.93
ME3-205ENST00000526504 NEO1Q92859 1461 aa33.34■■■□□ 2.93
ME3-205ENST00000526504 CFAP74Q9C0B2 1584 aa33.34■■■□□ 2.93
ME3-205ENST00000526504 ZNF644Q9H582 1327 aaPredicted RBP33.33■■■□□ 2.93
ME3-205ENST00000526504 PTPN23Q9H3S7 1636 aa33.32■■■□□ 2.92
ME3-205ENST00000526504 AKNAQ7Z591 1439 aa33.31■■■□□ 2.92
ME3-205ENST00000526504 SAMD9LQ8IVG5 1584 aa33.31■■■□□ 2.92
ME3-205ENST00000526504 CAMSAP2Q08AD1 1489 aa33.3■■■□□ 2.92
ME3-205ENST00000526504 TCOF1Q13428 1488 aaKnown RBP33.28■■■□□ 2.92
ME3-205ENST00000526504 FAM50AQ14320 339 aaKnown RBP33.27■■■□□ 2.92
ME3-205ENST00000526504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.26■■■□□ 2.92
ME3-205ENST00000526504 PLEKHH2Q8IVE3 1493 aa33.26■■■□□ 2.92
ME3-205ENST00000526504 ADGRL1O94910 1474 aa33.26■■■□□ 2.91
ME3-205ENST00000526504 ABCC1P33527 1531 aa33.23■■■□□ 2.91
ME3-205ENST00000526504 KIAA1107Q9UPP5 1409 aa33.23■■■□□ 2.91
ME3-205ENST00000526504 CLSPNQ9HAW4 1339 aa33.22■■■□□ 2.91
ME3-205ENST00000526504 SCAPERQ9BY12 1400 aa33.21■■■□□ 2.91
ME3-205ENST00000526504 SYCP2Q9BX26 1530 aa33.2■■■□□ 2.91
ME3-205ENST00000526504 HNRNPMP52272 730 aaKnown RBP eCLIP33.19■■■□□ 2.9
ME3-205ENST00000526504 ARHGEF12Q9NZN5 1544 aa33.17■■■□□ 2.9
ME3-205ENST00000526504 MBD5Q9P267 1494 aa33.16■■■□□ 2.9
ME3-205ENST00000526504 DHX57Q6P158 1386 aaKnown RBP33.14■■■□□ 2.9
ME3-205ENST00000526504 DENND4BO75064 1496 aaPredicted RBP33.13■■■□□ 2.89
ME3-205ENST00000526504 RSPH4AQ5TD94 716 aa33.12■■■□□ 2.89
ME3-205ENST00000526504 ARHGEF5Q12774 1597 aa33.11■■■□□ 2.89
ME3-205ENST00000526504 TRAPPC8Q9Y2L5 1435 aa33.11■■■□□ 2.89
ME3-205ENST00000526504 POGZQ7Z3K3 1410 aa33.09■■■□□ 2.89
ME3-205ENST00000526504 CCDC141Q6ZP82 1450 aa33.09■■■□□ 2.89
ME3-205ENST00000526504 RAPGEF3O95398 923 aa33.07■■■□□ 2.88
ME3-205ENST00000526504 AFAP1Q8N556 730 aa33.07■■■□□ 2.88
ME3-205ENST00000526504 ZNF518AQ6AHZ1 1483 aa33.07■■■□□ 2.88
ME3-205ENST00000526504 DNMT1P26358 1616 aaKnown RBP33.07■■■□□ 2.88
ME3-205ENST00000526504 COL17A1Q9UMD9 1497 aaPredicted RBP33.06■■■□□ 2.88
ME3-205ENST00000526504 DAPK1P53355 1430 aa33.06■■■□□ 2.88
ME3-205ENST00000526504 ABCC5O15440 1437 aa33.05■■■□□ 2.88
ME3-205ENST00000526504 ITGAEP38570 1179 aa33.05■■■□□ 2.88
ME3-205ENST00000526504 TSPY4P0CV99 314 aa33.02■■■□□ 2.88
ME3-205ENST00000526504 TSPY10P0CW01 314 aa33.02■■■□□ 2.88
ME3-205ENST00000526504 SETD5Q9C0A6 1442 aa33.01■■■□□ 2.87
ME3-205ENST00000526504 RICTORQ6R327 1708 aa33.01■■■□□ 2.87
ME3-205ENST00000526504 KDM6BO15054 1643 aa33■■■□□ 2.87
ME3-205ENST00000526504 RAB3GAP2Q9H2M9 1393 aa32.98■■■□□ 2.87
ME3-205ENST00000526504 FRMPD1Q5SYB0 1578 aa32.98■■■□□ 2.87
ME3-205ENST00000526504 KDM5CP41229 1560 aa32.98■■■□□ 2.87
ME3-205ENST00000526504 SPAG9O60271 1321 aaKnown RBP32.97■■■□□ 2.87
ME3-205ENST00000526504 CROCC2H7BZ55 1655 aa32.97■■■□□ 2.87
ME3-205ENST00000526504 SHANK2Q9UPX8 1470 aa32.96■■■□□ 2.87
ME3-205ENST00000526504 PTPRKQ15262 1439 aa32.96■■■□□ 2.87
ME3-205ENST00000526504 C9orf84Q5VXU9 1444 aa32.95■■■□□ 2.87
ME3-205ENST00000526504 CHIC2Q9UKJ5 165 aa32.93■■■□□ 2.86
ME3-205ENST00000526504 MYT1LQ9UL68 1186 aa32.91■■■□□ 2.86
ME3-205ENST00000526504 ZMYM4Q5VZL5 1548 aa32.9■■■□□ 2.86
ME3-205ENST00000526504 MAST1Q9Y2H9 1570 aa32.9■■■□□ 2.86
ME3-205ENST00000526504 MLH3Q9UHC1 1453 aa32.9■■■□□ 2.86
ME3-205ENST00000526504 RTEL1-TNFRSF6BF6WH68 1400 aa32.89■■■□□ 2.86
ME3-205ENST00000526504 HECW2Q9P2P5 1572 aa32.88■■■□□ 2.85
ME3-205ENST00000526504 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
ME3-205ENST00000526504 ZFYVE16Q7Z3T8 1539 aa32.87■■■□□ 2.85
ME3-205ENST00000526504 INO80Q9ULG1 1556 aaPredicted RBP32.87■■■□□ 2.85
ME3-205ENST00000526504 MAGI2Q86UL8 1455 aa32.85■■■□□ 2.85
ME3-205ENST00000526504 ANKRD30AQ9BXX3 1397 aa32.84■■■□□ 2.85
ME3-205ENST00000526504 ADGRL2O95490 1459 aa32.83■■■□□ 2.85
ME3-205ENST00000526504 KIDINS220Q9ULH0 1771 aa32.83■■■□□ 2.85
ME3-205ENST00000526504 ROCK1Q13464 1354 aa32.82■■■□□ 2.85
ME3-205ENST00000526504 ADGBQ8N7X0 1667 aa32.82■■■□□ 2.84
ME3-205ENST00000526504 NCOA1Q15788 1441 aa32.82■■■□□ 2.84
ME3-205ENST00000526504 PLXNC1O60486 1568 aa32.78■■■□□ 2.84
ME3-205ENST00000526504 YEATS2Q9ULM3 1422 aa32.78■■■□□ 2.84
ME3-205ENST00000526504 RRP7BPQ9NSQ0 103 aa32.78■■■□□ 2.84
ME3-205ENST00000526504 KIF15Q9NS87 1388 aa32.76■■■□□ 2.83
ME3-205ENST00000526504 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
ME3-205ENST00000526504 ABCA6Q8N139 1617 aa32.73■■■□□ 2.83
ME3-205ENST00000526504 DIP2CQ9Y2E4 1556 aa32.72■■■□□ 2.83
ME3-205ENST00000526504 ZNF316A6NFI3 1004 aaPredicted RBP32.72■■■□□ 2.83
ME3-205ENST00000526504 ARHGEF40Q8TER5 1519 aa32.72■■■□□ 2.83
ME3-205ENST00000526504 ATP10AO60312 1499 aa32.68■■■□□ 2.82
ME3-205ENST00000526504 DUOX2Q9NRD8 1548 aa32.67■■■□□ 2.82
ME3-205ENST00000526504 NAIPQ13075 1403 aa32.67■■■□□ 2.82
ME3-205ENST00000526504 A2MP01023 1474 aa32.66■■■□□ 2.82
ME3-205ENST00000526504 DHX29Q7Z478 1369 aaKnown RBP32.64■■■□□ 2.82
ME3-205ENST00000526504 ANKRD50Q9ULJ7 1429 aa32.62■■■□□ 2.81
ME3-205ENST00000526504 GCC2Q8IWJ2 1684 aa32.62■■■□□ 2.81
ME3-205ENST00000526504 ERBINQ96RT1 1412 aa32.59■■■□□ 2.81
ME3-205ENST00000526504 REREQ9P2R6 1566 aa32.58■■■□□ 2.81
ME3-205ENST00000526504 DIEXFQ68CQ4 756 aaKnown RBP32.56■■■□□ 2.8
ME3-205ENST00000526504 KIF3BO15066 747 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms