RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 CLIP1P30622 1438 aa19.99■□□□□ 0.79
COLCA1-202ENST00000526150 MYO5CQ9NQX4 1742 aa19.98■□□□□ 0.79
COLCA1-202ENST00000526150 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
COLCA1-202ENST00000526150 PCF11O94913 1555 aaKnown RBP19.97■□□□□ 0.79
COLCA1-202ENST00000526150 KIF14Q15058 1648 aa19.95■□□□□ 0.78
COLCA1-202ENST00000526150 TROQ12816 1431 aaPredicted RBP19.95■□□□□ 0.78
COLCA1-202ENST00000526150 YEATS2Q9ULM3 1422 aa19.95■□□□□ 0.78
COLCA1-202ENST00000526150 ATP10AO60312 1499 aa19.93■□□□□ 0.78
COLCA1-202ENST00000526150 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
COLCA1-202ENST00000526150 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
COLCA1-202ENST00000526150 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
COLCA1-202ENST00000526150 MLECQ14165 292 aa19.91■□□□□ 0.78
COLCA1-202ENST00000526150 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
COLCA1-202ENST00000526150 C9orf84Q5VXU9 1444 aa19.9■□□□□ 0.78
COLCA1-202ENST00000526150 ARHGAP5Q13017 1502 aa19.9■□□□□ 0.78
COLCA1-202ENST00000526150 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
COLCA1-202ENST00000526150 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
COLCA1-202ENST00000526150 FER1L4A9Z1Z3 1794 aa19.87■□□□□ 0.77
COLCA1-202ENST00000526150 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
COLCA1-202ENST00000526150 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
COLCA1-202ENST00000526150 SIGLEC1Q9BZZ2 1709 aa19.82■□□□□ 0.76
COLCA1-202ENST00000526150 ARHGEF12Q9NZN5 1544 aa19.82■□□□□ 0.76
COLCA1-202ENST00000526150 KDM5CP41229 1560 aa19.82■□□□□ 0.76
COLCA1-202ENST00000526150 HSPA2P54652 639 aa19.81■□□□□ 0.76
COLCA1-202ENST00000526150 LRRIQ1Q96JM4 1722 aa19.8■□□□□ 0.76
COLCA1-202ENST00000526150 ESF1Q9H501 851 aaKnown RBP19.79■□□□□ 0.76
COLCA1-202ENST00000526150 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
COLCA1-202ENST00000526150 MLH3Q9UHC1 1453 aa19.79■□□□□ 0.76
COLCA1-202ENST00000526150 PREX2Q70Z35 1606 aa19.77■□□□□ 0.76
COLCA1-202ENST00000526150 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
COLCA1-202ENST00000526150 SETD1BQ9UPS6 1966 aaKnown RBP19.76■□□□□ 0.75
COLCA1-202ENST00000526150 REREQ9P2R6 1566 aa19.76■□□□□ 0.75
COLCA1-202ENST00000526150 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
COLCA1-202ENST00000526150 PREX1Q8TCU6 1659 aa19.74■□□□□ 0.75
COLCA1-202ENST00000526150 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
COLCA1-202ENST00000526150 ABCC1P33527 1531 aa19.73■□□□□ 0.75
COLCA1-202ENST00000526150 CEBPAP49715 358 aaPredicted RBP19.72■□□□□ 0.75
COLCA1-202ENST00000526150 TRAPPC8Q9Y2L5 1435 aa19.71■□□□□ 0.75
COLCA1-202ENST00000526150 AGLP35573 1532 aa19.71■□□□□ 0.75
COLCA1-202ENST00000526150 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
COLCA1-202ENST00000526150 ITSN2Q9NZM3 1697 aa19.7■□□□□ 0.74
COLCA1-202ENST00000526150 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
COLCA1-202ENST00000526150 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
COLCA1-202ENST00000526150 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
COLCA1-202ENST00000526150 CERKQ8TCT0 537 aa19.67■□□□□ 0.74
COLCA1-202ENST00000526150 CNTLNQ9NXG0 1405 aa19.67■□□□□ 0.74
COLCA1-202ENST00000526150 CFDP1Q9UEE9 299 aaPredicted RBP19.65■□□□□ 0.74
COLCA1-202ENST00000526150 SPAG9O60271 1321 aaKnown RBP19.65■□□□□ 0.74
COLCA1-202ENST00000526150 PLEKHH2Q8IVE3 1493 aa19.65■□□□□ 0.74
COLCA1-202ENST00000526150 KIDINS220Q9ULH0 1771 aa19.64■□□□□ 0.73
COLCA1-202ENST00000526150 GPATCH8Q9UKJ3 1502 aaKnown RBP19.63■□□□□ 0.73
COLCA1-202ENST00000526150 MTUS2Q5JR59 1369 aa19.63■□□□□ 0.73
COLCA1-202ENST00000526150 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
COLCA1-202ENST00000526150 KIAA1107Q9UPP5 1409 aa19.62■□□□□ 0.73
COLCA1-202ENST00000526150 SAMD9LQ8IVG5 1584 aa19.61■□□□□ 0.73
COLCA1-202ENST00000526150 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
COLCA1-202ENST00000526150 C3P01024 1663 aa19.61■□□□□ 0.73
COLCA1-202ENST00000526150 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
COLCA1-202ENST00000526150 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
COLCA1-202ENST00000526150 PTPRTO14522 1441 aa19.55■□□□□ 0.72
COLCA1-202ENST00000526150 NPATQ14207 1427 aa19.55■□□□□ 0.72
COLCA1-202ENST00000526150 ATP7AQ04656 1500 aa19.55■□□□□ 0.72
COLCA1-202ENST00000526150 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
COLCA1-202ENST00000526150 MROH2AA6NES4 1674 aa19.54■□□□□ 0.72
COLCA1-202ENST00000526150 A2MP01023 1474 aa19.53■□□□□ 0.72
COLCA1-202ENST00000526150 SUPT6HQ7KZ85 1726 aaKnown RBP19.52■□□□□ 0.72
COLCA1-202ENST00000526150 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
COLCA1-202ENST00000526150 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
COLCA1-202ENST00000526150 INO80Q9ULG1 1556 aaPredicted RBP19.49■□□□□ 0.71
COLCA1-202ENST00000526150 GGT6Q6P531 493 aa19.49■□□□□ 0.71
COLCA1-202ENST00000526150 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
COLCA1-202ENST00000526150 ADGBQ8N7X0 1667 aa19.47■□□□□ 0.71
COLCA1-202ENST00000526150 RSPH4AQ5TD94 716 aa19.47■□□□□ 0.71
COLCA1-202ENST00000526150 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
COLCA1-202ENST00000526150 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
COLCA1-202ENST00000526150 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
COLCA1-202ENST00000526150 TIAM1Q13009 1591 aa19.45■□□□□ 0.7
COLCA1-202ENST00000526150 CLTCQ00610 1675 aaKnown RBP19.43■□□□□ 0.7
COLCA1-202ENST00000526150 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
COLCA1-202ENST00000526150 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
COLCA1-202ENST00000526150 PKD2Q13563 968 aa19.42■□□□□ 0.7
COLCA1-202ENST00000526150 CAMSAP1Q5T5Y3 1602 aa19.42■□□□□ 0.7
COLCA1-202ENST00000526150 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
COLCA1-202ENST00000526150 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
COLCA1-202ENST00000526150 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
COLCA1-202ENST00000526150 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
COLCA1-202ENST00000526150 CCDC141Q6ZP82 1450 aa19.38■□□□□ 0.69
COLCA1-202ENST00000526150 NCOA2Q15596 1464 aa19.37■□□□□ 0.69
COLCA1-202ENST00000526150 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
COLCA1-202ENST00000526150 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
COLCA1-202ENST00000526150 ZNF142P52746 1687 aaPredicted RBP19.36■□□□□ 0.69
COLCA1-202ENST00000526150 KIF3BO15066 747 aa19.36■□□□□ 0.69
COLCA1-202ENST00000526150 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
COLCA1-202ENST00000526150 MYO3AQ8NEV4 1616 aa19.36■□□□□ 0.69
COLCA1-202ENST00000526150 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
COLCA1-202ENST00000526150 NCKAP5LQ9HCH0 1330 aa19.35■□□□□ 0.69
COLCA1-202ENST00000526150 FAM135AQ9P2D6 1515 aa19.35■□□□□ 0.69
COLCA1-202ENST00000526150 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
COLCA1-202ENST00000526150 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
COLCA1-202ENST00000526150 A2ML1A8K2U0 1454 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms