RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
LMX1B-203ENST00000526117 GPATCH8Q9UKJ3 1502 aaKnown RBP27.25■■□□□ 1.95
LMX1B-203ENST00000526117 SUPT6HQ7KZ85 1726 aaKnown RBP27.24■■□□□ 1.95
LMX1B-203ENST00000526117 FRMPD1Q5SYB0 1578 aa27.23■■□□□ 1.95
LMX1B-203ENST00000526117 DENND4BO75064 1496 aaPredicted RBP27.23■■□□□ 1.95
LMX1B-203ENST00000526117 ADGRL1O94910 1474 aa27.21■■□□□ 1.95
LMX1B-203ENST00000526117 RICTORQ6R327 1708 aa27.21■■□□□ 1.95
LMX1B-203ENST00000526117 ITSN2Q9NZM3 1697 aa27.19■■□□□ 1.94
LMX1B-203ENST00000526117 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
LMX1B-203ENST00000526117 NCOA2Q15596 1464 aa27.19■■□□□ 1.94
LMX1B-203ENST00000526117 ZMYM4Q5VZL5 1548 aa27.18■■□□□ 1.94
LMX1B-203ENST00000526117 POGZQ7Z3K3 1410 aa27.16■■□□□ 1.94
LMX1B-203ENST00000526117 ABCC1P33527 1531 aa27.16■■□□□ 1.94
LMX1B-203ENST00000526117 SCAPERQ9BY12 1400 aa27.16■■□□□ 1.94
LMX1B-203ENST00000526117 APLP2Q06481 763 aa27.14■■□□□ 1.94
LMX1B-203ENST00000526117 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
LMX1B-203ENST00000526117 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
LMX1B-203ENST00000526117 ZNF518AQ6AHZ1 1483 aa27.12■■□□□ 1.93
LMX1B-203ENST00000526117 SAMD9LQ8IVG5 1584 aa27.11■■□□□ 1.93
LMX1B-203ENST00000526117 MAGI2Q86UL8 1455 aa27.11■■□□□ 1.93
LMX1B-203ENST00000526117 PLEKHH2Q8IVE3 1493 aa27.11■■□□□ 1.93
LMX1B-203ENST00000526117 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
LMX1B-203ENST00000526117 KDM5CP41229 1560 aa27.09■■□□□ 1.93
LMX1B-203ENST00000526117 KIAA1107Q9UPP5 1409 aa27.09■■□□□ 1.93
LMX1B-203ENST00000526117 CFDP1Q9UEE9 299 aaPredicted RBP27.08■■□□□ 1.93
LMX1B-203ENST00000526117 ARHGEF40Q8TER5 1519 aa27.06■■□□□ 1.92
LMX1B-203ENST00000526117 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
LMX1B-203ENST00000526117 SYCP2Q9BX26 1530 aa27.01■■□□□ 1.91
LMX1B-203ENST00000526117 MYOM3Q5VTT5 1437 aa27■■□□□ 1.91
LMX1B-203ENST00000526117 MIA2Q96PC5 1412 aa27■■□□□ 1.91
LMX1B-203ENST00000526117 ZFYVE16Q7Z3T8 1539 aa27■■□□□ 1.91
LMX1B-203ENST00000526117 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
LMX1B-203ENST00000526117 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
LMX1B-203ENST00000526117 HECW2Q9P2P5 1572 aa26.98■■□□□ 1.91
LMX1B-203ENST00000526117 MBD5Q9P267 1494 aa26.95■■□□□ 1.91
LMX1B-203ENST00000526117 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
LMX1B-203ENST00000526117 CAMSAP2Q08AD1 1489 aa26.94■■□□□ 1.9
LMX1B-203ENST00000526117 AFAP1Q8N556 730 aa26.94■■□□□ 1.9
LMX1B-203ENST00000526117 YEATS2Q9ULM3 1422 aa26.92■■□□□ 1.9
LMX1B-203ENST00000526117 ARHGEF5Q12774 1597 aa26.9■■□□□ 1.9
LMX1B-203ENST00000526117 REREQ9P2R6 1566 aa26.9■■□□□ 1.9
LMX1B-203ENST00000526117 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
LMX1B-203ENST00000526117 INO80Q9ULG1 1556 aaPredicted RBP26.88■■□□□ 1.89
LMX1B-203ENST00000526117 ATP10AO60312 1499 aa26.88■■□□□ 1.89
LMX1B-203ENST00000526117 HNRNPMP52272 730 aaKnown RBP eCLIP26.88■■□□□ 1.89
LMX1B-203ENST00000526117 RSPH4AQ5TD94 716 aa26.88■■□□□ 1.89
LMX1B-203ENST00000526117 KIDINS220Q9ULH0 1771 aa26.88■■□□□ 1.89
LMX1B-203ENST00000526117 DIP2CQ9Y2E4 1556 aa26.88■■□□□ 1.89
LMX1B-203ENST00000526117 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
LMX1B-203ENST00000526117 C9orf84Q5VXU9 1444 aa26.86■■□□□ 1.89
LMX1B-203ENST00000526117 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
LMX1B-203ENST00000526117 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
LMX1B-203ENST00000526117 RTEL1-TNFRSF6BF6WH68 1400 aa26.84■■□□□ 1.89
LMX1B-203ENST00000526117 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
LMX1B-203ENST00000526117 ATP7AQ04656 1500 aa26.84■■□□□ 1.89
LMX1B-203ENST00000526117 PTPN23Q9H3S7 1636 aa26.83■■□□□ 1.88
LMX1B-203ENST00000526117 SPAG9O60271 1321 aaKnown RBP26.82■■□□□ 1.88
LMX1B-203ENST00000526117 SIGLEC1Q9BZZ2 1709 aa26.79■■□□□ 1.88
LMX1B-203ENST00000526117 KDM4FA0A1W2PPD8 638 aa26.78■■□□□ 1.88
LMX1B-203ENST00000526117 BCORL1Q5H9F3 1711 aa26.78■■□□□ 1.88
LMX1B-203ENST00000526117 MAST1Q9Y2H9 1570 aa26.77■■□□□ 1.88
LMX1B-203ENST00000526117 AGLP35573 1532 aa26.77■■□□□ 1.88
LMX1B-203ENST00000526117 ADAMTSL3P82987 1691 aa26.75■■□□□ 1.87
LMX1B-203ENST00000526117 PLXNC1O60486 1568 aa26.73■■□□□ 1.87
LMX1B-203ENST00000526117 ADGBQ8N7X0 1667 aa26.73■■□□□ 1.87
LMX1B-203ENST00000526117 SHANK2Q9UPX8 1470 aa26.72■■□□□ 1.87
LMX1B-203ENST00000526117 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
LMX1B-203ENST00000526117 CROCC2H7BZ55 1655 aa26.7■■□□□ 1.87
LMX1B-203ENST00000526117 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
LMX1B-203ENST00000526117 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
LMX1B-203ENST00000526117 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
LMX1B-203ENST00000526117 A2MP01023 1474 aa26.68■■□□□ 1.86
LMX1B-203ENST00000526117 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
LMX1B-203ENST00000526117 ABCC5O15440 1437 aa26.66■■□□□ 1.86
LMX1B-203ENST00000526117 DAPK1P53355 1430 aa26.65■■□□□ 1.86
LMX1B-203ENST00000526117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.65■■□□□ 1.86
LMX1B-203ENST00000526117 MADDQ8WXG6 1647 aa26.61■■□□□ 1.85
LMX1B-203ENST00000526117 DHX29Q7Z478 1369 aaKnown RBP26.61■■□□□ 1.85
LMX1B-203ENST00000526117 RRBP1Q9P2E9 1410 aaKnown RBP26.57■■□□□ 1.84
LMX1B-203ENST00000526117 FER1L4A9Z1Z3 1794 aa26.56■■□□□ 1.84
LMX1B-203ENST00000526117 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
LMX1B-203ENST00000526117 PTPRMP28827 1452 aa26.55■■□□□ 1.84
LMX1B-203ENST00000526117 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
LMX1B-203ENST00000526117 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
LMX1B-203ENST00000526117 EIF2AK4Q9P2K8 1649 aaKnown RBP26.53■■□□□ 1.84
LMX1B-203ENST00000526117 RIMS1Q86UR5 1692 aaKnown RBP26.51■■□□□ 1.83
LMX1B-203ENST00000526117 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
LMX1B-203ENST00000526117 FAM50AQ14320 339 aaKnown RBP26.51■■□□□ 1.83
LMX1B-203ENST00000526117 PPP6R1Q9UPN7 881 aa26.5■■□□□ 1.83
LMX1B-203ENST00000526117 NCOA1Q15788 1441 aa26.48■■□□□ 1.83
LMX1B-203ENST00000526117 CNTLNQ9NXG0 1405 aa26.48■■□□□ 1.83
LMX1B-203ENST00000526117 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
LMX1B-203ENST00000526117 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
LMX1B-203ENST00000526117 KIF15Q9NS87 1388 aa26.47■■□□□ 1.83
LMX1B-203ENST00000526117 MLECQ14165 292 aa26.47■■□□□ 1.83
LMX1B-203ENST00000526117 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
LMX1B-203ENST00000526117 MROH2AA6NES4 1674 aa26.45■■□□□ 1.82
LMX1B-203ENST00000526117 ROCK1Q13464 1354 aa26.44■■□□□ 1.82
LMX1B-203ENST00000526117 PTPRKQ15262 1439 aa26.42■■□□□ 1.82
LMX1B-203ENST00000526117 KIF3BO15066 747 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms