RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
CLNS1A-205ENST00000526009 CD109Q6YHK3 1445 aa12.97□□□□□ -0.33
CLNS1A-205ENST00000526009 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
CLNS1A-205ENST00000526009 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
CLNS1A-205ENST00000526009 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
CLNS1A-205ENST00000526009 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
CLNS1A-205ENST00000526009 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
CLNS1A-205ENST00000526009 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
CLNS1A-205ENST00000526009 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
CLNS1A-205ENST00000526009 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
CLNS1A-205ENST00000526009 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
CLNS1A-205ENST00000526009 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
CLNS1A-205ENST00000526009 KIF21BO75037 1637 aa12.87□□□□□ -0.35
CLNS1A-205ENST00000526009 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-205ENST00000526009 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
CLNS1A-205ENST00000526009 ABCA8O94911 1581 aa12.86□□□□□ -0.35
CLNS1A-205ENST00000526009 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
CLNS1A-205ENST00000526009 PTPRMP28827 1452 aa12.84□□□□□ -0.35
CLNS1A-205ENST00000526009 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
CLNS1A-205ENST00000526009 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
CLNS1A-205ENST00000526009 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
CLNS1A-205ENST00000526009 MIER1Q8N108 512 aa12.82□□□□□ -0.36
CLNS1A-205ENST00000526009 POTEHQ6S545 545 aa12.81□□□□□ -0.36
CLNS1A-205ENST00000526009 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
CLNS1A-205ENST00000526009 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
CLNS1A-205ENST00000526009 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
CLNS1A-205ENST00000526009 ATP10BO94823 1461 aa12.79□□□□□ -0.36
CLNS1A-205ENST00000526009 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
CLNS1A-205ENST00000526009 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
CLNS1A-205ENST00000526009 PCF11O94913 1555 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-205ENST00000526009 NEO1Q92859 1461 aa12.75□□□□□ -0.37
CLNS1A-205ENST00000526009 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
CLNS1A-205ENST00000526009 LMTK3Q96Q04 1460 aa12.74□□□□□ -0.37
CLNS1A-205ENST00000526009 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
CLNS1A-205ENST00000526009 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
CLNS1A-205ENST00000526009 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
CLNS1A-205ENST00000526009 HSPA2P54652 639 aa12.72□□□□□ -0.37
CLNS1A-205ENST00000526009 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
CLNS1A-205ENST00000526009 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
CLNS1A-205ENST00000526009 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-205ENST00000526009 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
CLNS1A-205ENST00000526009 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
CLNS1A-205ENST00000526009 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
CLNS1A-205ENST00000526009 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
CLNS1A-205ENST00000526009 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
CLNS1A-205ENST00000526009 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
CLNS1A-205ENST00000526009 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
CLNS1A-205ENST00000526009 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLNS1A-205ENST00000526009 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
CLNS1A-205ENST00000526009 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
CLNS1A-205ENST00000526009 AKNAQ7Z591 1439 aa12.64□□□□□ -0.39
CLNS1A-205ENST00000526009 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
CLNS1A-205ENST00000526009 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
CLNS1A-205ENST00000526009 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
CLNS1A-205ENST00000526009 MLECQ14165 292 aa12.63□□□□□ -0.39
CLNS1A-205ENST00000526009 FANCAO15360 1455 aa12.63□□□□□ -0.39
CLNS1A-205ENST00000526009 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
CLNS1A-205ENST00000526009 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
CLNS1A-205ENST00000526009 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
CLNS1A-205ENST00000526009 RICTORQ6R327 1708 aa12.6□□□□□ -0.39
CLNS1A-205ENST00000526009 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-205ENST00000526009 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-205ENST00000526009 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
CLNS1A-205ENST00000526009 DISP3Q9P2K9 1392 aa12.59□□□□□ -0.39
CLNS1A-205ENST00000526009 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
CLNS1A-205ENST00000526009 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
CLNS1A-205ENST00000526009 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 ZMYM4Q5VZL5 1548 aa12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 CFAP74Q9C0B2 1584 aa12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 SOCS7O14512 581 aa12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLNS1A-205ENST00000526009 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
CLNS1A-205ENST00000526009 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
CLNS1A-205ENST00000526009 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
CLNS1A-205ENST00000526009 HECW1Q76N89 1606 aa12.54□□□□□ -0.4
CLNS1A-205ENST00000526009 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
CLNS1A-205ENST00000526009 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
CLNS1A-205ENST00000526009 ATP10AO60312 1499 aa12.53□□□□□ -0.4
CLNS1A-205ENST00000526009 FER1L4A9Z1Z3 1794 aa12.52□□□□□ -0.41
CLNS1A-205ENST00000526009 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
CLNS1A-205ENST00000526009 PLCH2O75038 1416 aa12.52□□□□□ -0.41
CLNS1A-205ENST00000526009 EFCAB2Q5VUJ9 269 aa12.51□□□□□ -0.41
CLNS1A-205ENST00000526009 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
CLNS1A-205ENST00000526009 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
CLNS1A-205ENST00000526009 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
CLNS1A-205ENST00000526009 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
CLNS1A-205ENST00000526009 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
CLNS1A-205ENST00000526009 UHRF1BP1Q6BDS2 1440 aa12.48□□□□□ -0.41
CLNS1A-205ENST00000526009 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
CLNS1A-205ENST00000526009 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-205ENST00000526009 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
CLNS1A-205ENST00000526009 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-205ENST00000526009 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
CLNS1A-205ENST00000526009 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-205ENST00000526009 STRCQ7RTU9 1775 aa12.45□□□□□ -0.42
CLNS1A-205ENST00000526009 EEA1Q15075 1411 aa12.45□□□□□ -0.42
CLNS1A-205ENST00000526009 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-205ENST00000526009 PTPRTO14522 1441 aa12.44□□□□□ -0.42
CLNS1A-205ENST00000526009 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms