RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 EFCAB2Q5VUJ9 269 aa27.22■■□□□ 1.95
PKP3-203ENST00000525642 FRMPD1Q5SYB0 1578 aa27.18■■□□□ 1.94
PKP3-203ENST00000525642 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
PKP3-203ENST00000525642 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
PKP3-203ENST00000525642 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
PKP3-203ENST00000525642 RICTORQ6R327 1708 aa27.16■■□□□ 1.94
PKP3-203ENST00000525642 DENND4BO75064 1496 aaPredicted RBP27.15■■□□□ 1.94
PKP3-203ENST00000525642 ADGRL1O94910 1474 aa27.15■■□□□ 1.94
PKP3-203ENST00000525642 NCOA2Q15596 1464 aa27.15■■□□□ 1.94
PKP3-203ENST00000525642 CCNB3Q8WWL7 1395 aa27.13■■□□□ 1.93
PKP3-203ENST00000525642 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
PKP3-203ENST00000525642 SCAPERQ9BY12 1400 aa27.12■■□□□ 1.93
PKP3-203ENST00000525642 POGZQ7Z3K3 1410 aa27.08■■□□□ 1.93
PKP3-203ENST00000525642 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.93
PKP3-203ENST00000525642 ABCC1P33527 1531 aa27.08■■□□□ 1.93
PKP3-203ENST00000525642 ZMYM4Q5VZL5 1548 aa27.08■■□□□ 1.93
PKP3-203ENST00000525642 SAMD9LQ8IVG5 1584 aa27.07■■□□□ 1.92
PKP3-203ENST00000525642 APLP2Q06481 763 aa27.06■■□□□ 1.92
PKP3-203ENST00000525642 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
PKP3-203ENST00000525642 CFDP1Q9UEE9 299 aaPredicted RBP27.04■■□□□ 1.92
PKP3-203ENST00000525642 KDM5CP41229 1560 aa27.02■■□□□ 1.92
PKP3-203ENST00000525642 KIAA1107Q9UPP5 1409 aa27.02■■□□□ 1.92
PKP3-203ENST00000525642 ZNF518AQ6AHZ1 1483 aa27.01■■□□□ 1.91
PKP3-203ENST00000525642 MAGI2Q86UL8 1455 aa27.01■■□□□ 1.91
PKP3-203ENST00000525642 PLEKHH2Q8IVE3 1493 aa27■■□□□ 1.91
PKP3-203ENST00000525642 TRAPPC8Q9Y2L5 1435 aa26.98■■□□□ 1.91
PKP3-203ENST00000525642 AFAP1Q8N556 730 aa26.95■■□□□ 1.9
PKP3-203ENST00000525642 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.9
PKP3-203ENST00000525642 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
PKP3-203ENST00000525642 MYOM3Q5VTT5 1437 aa26.94■■□□□ 1.9
PKP3-203ENST00000525642 MIA2Q96PC5 1412 aa26.94■■□□□ 1.9
PKP3-203ENST00000525642 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
PKP3-203ENST00000525642 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
PKP3-203ENST00000525642 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
PKP3-203ENST00000525642 ZNF644Q9H582 1327 aaPredicted RBP26.92■■□□□ 1.9
PKP3-203ENST00000525642 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
PKP3-203ENST00000525642 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
PKP3-203ENST00000525642 HNRNPMP52272 730 aaKnown RBP eCLIP26.9■■□□□ 1.9
PKP3-203ENST00000525642 CAMSAP2Q08AD1 1489 aa26.89■■□□□ 1.9
PKP3-203ENST00000525642 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
PKP3-203ENST00000525642 KIDINS220Q9ULH0 1771 aa26.85■■□□□ 1.89
PKP3-203ENST00000525642 ATP10AO60312 1499 aa26.83■■□□□ 1.89
PKP3-203ENST00000525642 ARHGEF5Q12774 1597 aa26.83■■□□□ 1.89
PKP3-203ENST00000525642 RSPH4AQ5TD94 716 aa26.82■■□□□ 1.88
PKP3-203ENST00000525642 DIP2CQ9Y2E4 1556 aa26.81■■□□□ 1.88
PKP3-203ENST00000525642 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
PKP3-203ENST00000525642 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
PKP3-203ENST00000525642 KDM4FA0A1W2PPD8 638 aa26.8■■□□□ 1.88
PKP3-203ENST00000525642 FGD6Q6ZV73 1430 aa26.8■■□□□ 1.88
PKP3-203ENST00000525642 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
PKP3-203ENST00000525642 SIGLEC1Q9BZZ2 1709 aa26.79■■□□□ 1.88
PKP3-203ENST00000525642 TCOF1Q13428 1488 aaKnown RBP26.79■■□□□ 1.88
PKP3-203ENST00000525642 RTEL1-TNFRSF6BF6WH68 1400 aa26.78■■□□□ 1.88
PKP3-203ENST00000525642 CCDC141Q6ZP82 1450 aa26.78■■□□□ 1.88
PKP3-203ENST00000525642 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
PKP3-203ENST00000525642 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
PKP3-203ENST00000525642 PTPN23Q9H3S7 1636 aa26.76■■□□□ 1.87
PKP3-203ENST00000525642 ATP7AQ04656 1500 aa26.76■■□□□ 1.87
PKP3-203ENST00000525642 BCORL1Q5H9F3 1711 aa26.72■■□□□ 1.87
PKP3-203ENST00000525642 ADAMTSL3P82987 1691 aa26.7■■□□□ 1.87
PKP3-203ENST00000525642 MAST1Q9Y2H9 1570 aa26.7■■□□□ 1.86
PKP3-203ENST00000525642 AGLP35573 1532 aa26.7■■□□□ 1.86
PKP3-203ENST00000525642 PLXNC1O60486 1568 aa26.66■■□□□ 1.86
PKP3-203ENST00000525642 MYT1LQ9UL68 1186 aa26.65■■□□□ 1.86
PKP3-203ENST00000525642 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
PKP3-203ENST00000525642 ABCC5O15440 1437 aa26.65■■□□□ 1.86
PKP3-203ENST00000525642 ADGBQ8N7X0 1667 aa26.64■■□□□ 1.86
PKP3-203ENST00000525642 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
PKP3-203ENST00000525642 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
PKP3-203ENST00000525642 ARID4BQ4LE39 1312 aaPredicted RBP26.63■■□□□ 1.85
PKP3-203ENST00000525642 SHANK2Q9UPX8 1470 aa26.62■■□□□ 1.85
PKP3-203ENST00000525642 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
PKP3-203ENST00000525642 CROCC2H7BZ55 1655 aa26.62■■□□□ 1.85
PKP3-203ENST00000525642 A2MP01023 1474 aa26.62■■□□□ 1.85
PKP3-203ENST00000525642 DAPK1P53355 1430 aa26.6■■□□□ 1.85
PKP3-203ENST00000525642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.85
PKP3-203ENST00000525642 DHX29Q7Z478 1369 aaKnown RBP26.58■■□□□ 1.84
PKP3-203ENST00000525642 MADDQ8WXG6 1647 aa26.56■■□□□ 1.84
PKP3-203ENST00000525642 RRBP1Q9P2E9 1410 aaKnown RBP26.53■■□□□ 1.84
PKP3-203ENST00000525642 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
PKP3-203ENST00000525642 ADGRL2O95490 1459 aa26.49■■□□□ 1.83
PKP3-203ENST00000525642 PTPRMP28827 1452 aa26.49■■□□□ 1.83
PKP3-203ENST00000525642 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
PKP3-203ENST00000525642 FER1L4A9Z1Z3 1794 aa26.48■■□□□ 1.83
PKP3-203ENST00000525642 MLECQ14165 292 aa26.47■■□□□ 1.83
PKP3-203ENST00000525642 RIMS1Q86UR5 1692 aaKnown RBP26.46■■□□□ 1.83
PKP3-203ENST00000525642 PTPRKQ15262 1439 aa26.46■■□□□ 1.83
PKP3-203ENST00000525642 NCOA1Q15788 1441 aa26.46■■□□□ 1.83
PKP3-203ENST00000525642 DUOX2Q9NRD8 1548 aa26.45■■□□□ 1.83
PKP3-203ENST00000525642 PPP6R1Q9UPN7 881 aa26.43■■□□□ 1.82
PKP3-203ENST00000525642 EIF2AK4Q9P2K8 1649 aaKnown RBP26.43■■□□□ 1.82
PKP3-203ENST00000525642 ANKRD30AQ9BXX3 1397 aa26.42■■□□□ 1.82
PKP3-203ENST00000525642 KIF15Q9NS87 1388 aa26.42■■□□□ 1.82
PKP3-203ENST00000525642 RNF17Q9BXT8 1623 aaKnown RBP26.39■■□□□ 1.81
PKP3-203ENST00000525642 ERBINQ96RT1 1412 aa26.39■■□□□ 1.81
PKP3-203ENST00000525642 CHIC2Q9UKJ5 165 aa26.38■■□□□ 1.81
PKP3-203ENST00000525642 CNTLNQ9NXG0 1405 aa26.38■■□□□ 1.81
PKP3-203ENST00000525642 ROCK1Q13464 1354 aa26.37■■□□□ 1.81
PKP3-203ENST00000525642 KIF3BO15066 747 aa26.37■■□□□ 1.81
PKP3-203ENST00000525642 RRP7BPQ9NSQ0 103 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms