RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
IFITM1-203ENST00000525554 MYO5CQ9NQX4 1742 aa22.35■■□□□ 1.17
IFITM1-203ENST00000525554 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
IFITM1-203ENST00000525554 KIF14Q15058 1648 aa22.35■■□□□ 1.17
IFITM1-203ENST00000525554 MADDQ8WXG6 1647 aa22.35■■□□□ 1.17
IFITM1-203ENST00000525554 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
IFITM1-203ENST00000525554 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
IFITM1-203ENST00000525554 ATP10AO60312 1499 aa22.31■■□□□ 1.16
IFITM1-203ENST00000525554 ZNF518AQ6AHZ1 1483 aa22.3■■□□□ 1.16
IFITM1-203ENST00000525554 ARHGAP5Q13017 1502 aa22.28■■□□□ 1.16
IFITM1-203ENST00000525554 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
IFITM1-203ENST00000525554 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
IFITM1-203ENST00000525554 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
IFITM1-203ENST00000525554 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
IFITM1-203ENST00000525554 RIMS1Q86UR5 1692 aaKnown RBP22.25■■□□□ 1.15
IFITM1-203ENST00000525554 LMTK3Q96Q04 1460 aa22.23■■□□□ 1.15
IFITM1-203ENST00000525554 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
IFITM1-203ENST00000525554 KDM5CP41229 1560 aa22.23■■□□□ 1.15
IFITM1-203ENST00000525554 MLECQ14165 292 aa22.22■■□□□ 1.15
IFITM1-203ENST00000525554 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
IFITM1-203ENST00000525554 MLH3Q9UHC1 1453 aa22.2■■□□□ 1.14
IFITM1-203ENST00000525554 ARHGEF12Q9NZN5 1544 aa22.19■■□□□ 1.14
IFITM1-203ENST00000525554 CDC42BPBQ9Y5S2 1711 aa22.19■■□□□ 1.14
IFITM1-203ENST00000525554 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
IFITM1-203ENST00000525554 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
IFITM1-203ENST00000525554 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
IFITM1-203ENST00000525554 FER1L4A9Z1Z3 1794 aa22.15■■□□□ 1.14
IFITM1-203ENST00000525554 ABCC1P33527 1531 aa22.13■■□□□ 1.13
IFITM1-203ENST00000525554 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
IFITM1-203ENST00000525554 FBXO41Q8TF61 875 aa22.12■■□□□ 1.13
IFITM1-203ENST00000525554 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
IFITM1-203ENST00000525554 DIP2CQ9Y2E4 1556 aa22.1■■□□□ 1.13
IFITM1-203ENST00000525554 AGLP35573 1532 aa22.1■■□□□ 1.13
IFITM1-203ENST00000525554 HSPA2P54652 639 aa22.09■■□□□ 1.13
IFITM1-203ENST00000525554 GPATCH8Q9UKJ3 1502 aaKnown RBP22.09■■□□□ 1.13
IFITM1-203ENST00000525554 CDC42BPAQ5VT25 1732 aa22.09■■□□□ 1.13
IFITM1-203ENST00000525554 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
IFITM1-203ENST00000525554 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
IFITM1-203ENST00000525554 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
IFITM1-203ENST00000525554 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
IFITM1-203ENST00000525554 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
IFITM1-203ENST00000525554 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
IFITM1-203ENST00000525554 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
IFITM1-203ENST00000525554 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
IFITM1-203ENST00000525554 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
IFITM1-203ENST00000525554 MTUS2Q5JR59 1369 aa22.03■■□□□ 1.12
IFITM1-203ENST00000525554 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
IFITM1-203ENST00000525554 SPAG9O60271 1321 aaKnown RBP22.02■■□□□ 1.12
IFITM1-203ENST00000525554 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.11
IFITM1-203ENST00000525554 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
IFITM1-203ENST00000525554 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.11
IFITM1-203ENST00000525554 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
IFITM1-203ENST00000525554 PREX1Q8TCU6 1659 aa22■■□□□ 1.11
IFITM1-203ENST00000525554 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
IFITM1-203ENST00000525554 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
IFITM1-203ENST00000525554 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
IFITM1-203ENST00000525554 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
IFITM1-203ENST00000525554 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
IFITM1-203ENST00000525554 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
IFITM1-203ENST00000525554 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
IFITM1-203ENST00000525554 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
IFITM1-203ENST00000525554 C3P01024 1663 aa21.9■■□□□ 1.1
IFITM1-203ENST00000525554 RSPH4AQ5TD94 716 aa21.88■■□□□ 1.09
IFITM1-203ENST00000525554 A2MP01023 1474 aa21.88■■□□□ 1.09
IFITM1-203ENST00000525554 NPATQ14207 1427 aa21.88■■□□□ 1.09
IFITM1-203ENST00000525554 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
IFITM1-203ENST00000525554 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
IFITM1-203ENST00000525554 RTEL1-TNFRSF6BF6WH68 1400 aa21.87■■□□□ 1.09
IFITM1-203ENST00000525554 MBD5Q9P267 1494 aa21.86■■□□□ 1.09
IFITM1-203ENST00000525554 TIAM1Q13009 1591 aa21.86■■□□□ 1.09
IFITM1-203ENST00000525554 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
IFITM1-203ENST00000525554 PLXNC1O60486 1568 aa21.85■■□□□ 1.09
IFITM1-203ENST00000525554 MROH2AA6NES4 1674 aa21.85■■□□□ 1.09
IFITM1-203ENST00000525554 PTPRTO14522 1441 aa21.83■■□□□ 1.09
IFITM1-203ENST00000525554 STRCQ7RTU9 1775 aa21.83■■□□□ 1.09
IFITM1-203ENST00000525554 SUPT6HQ7KZ85 1726 aaKnown RBP21.82■■□□□ 1.08
IFITM1-203ENST00000525554 GGT6Q6P531 493 aa21.8■■□□□ 1.08
IFITM1-203ENST00000525554 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
IFITM1-203ENST00000525554 DHX29Q7Z478 1369 aaKnown RBP21.79■■□□□ 1.08
IFITM1-203ENST00000525554 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
IFITM1-203ENST00000525554 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
IFITM1-203ENST00000525554 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
IFITM1-203ENST00000525554 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
IFITM1-203ENST00000525554 PTPRKQ15262 1439 aa21.73■■□□□ 1.07
IFITM1-203ENST00000525554 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
IFITM1-203ENST00000525554 CLTCQ00610 1675 aaKnown RBP21.72■■□□□ 1.07
IFITM1-203ENST00000525554 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
IFITM1-203ENST00000525554 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
IFITM1-203ENST00000525554 CAMSAP2Q08AD1 1489 aa21.71■■□□□ 1.07
IFITM1-203ENST00000525554 LRRC9Q6ZRR7 1453 aa21.71■■□□□ 1.07
IFITM1-203ENST00000525554 MAP3K1Q13233 1512 aa21.7■■□□□ 1.07
IFITM1-203ENST00000525554 KIF3BO15066 747 aa21.69■■□□□ 1.06
IFITM1-203ENST00000525554 PKD2Q13563 968 aa21.69■■□□□ 1.06
IFITM1-203ENST00000525554 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
IFITM1-203ENST00000525554 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
IFITM1-203ENST00000525554 CAMSAP1Q5T5Y3 1602 aa21.68■■□□□ 1.06
IFITM1-203ENST00000525554 PLA2R1Q13018 1463 aa21.67■■□□□ 1.06
IFITM1-203ENST00000525554 ZNF142P52746 1687 aaPredicted RBP21.64■■□□□ 1.05
IFITM1-203ENST00000525554 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
IFITM1-203ENST00000525554 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms