RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
SMCO4-202ENST00000525141 ADAMTSL3P82987 1691 aa20.26■□□□□ 0.83
SMCO4-202ENST00000525141 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
SMCO4-202ENST00000525141 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
SMCO4-202ENST00000525141 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
SMCO4-202ENST00000525141 ZMYM4Q5VZL5 1548 aa20.23■□□□□ 0.83
SMCO4-202ENST00000525141 POGZQ7Z3K3 1410 aa20.23■□□□□ 0.83
SMCO4-202ENST00000525141 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
SMCO4-202ENST00000525141 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
SMCO4-202ENST00000525141 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
SMCO4-202ENST00000525141 BCORL1Q5H9F3 1711 aa20.21■□□□□ 0.83
SMCO4-202ENST00000525141 PTPRMP28827 1452 aa20.2■□□□□ 0.82
SMCO4-202ENST00000525141 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
SMCO4-202ENST00000525141 ARHGEF40Q8TER5 1519 aa20.19■□□□□ 0.82
SMCO4-202ENST00000525141 ARHGEF12Q9NZN5 1544 aa20.19■□□□□ 0.82
SMCO4-202ENST00000525141 ZFYVE16Q7Z3T8 1539 aa20.18■□□□□ 0.82
SMCO4-202ENST00000525141 CEP162Q5TB80 1403 aa20.17■□□□□ 0.82
SMCO4-202ENST00000525141 ATP10AO60312 1499 aa20.16■□□□□ 0.82
SMCO4-202ENST00000525141 HECW2Q9P2P5 1572 aa20.16■□□□□ 0.82
SMCO4-202ENST00000525141 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
SMCO4-202ENST00000525141 GPATCH8Q9UKJ3 1502 aaKnown RBP20.14■□□□□ 0.81
SMCO4-202ENST00000525141 MLECQ14165 292 aa20.14■□□□□ 0.81
SMCO4-202ENST00000525141 MADDQ8WXG6 1647 aa20.13■□□□□ 0.81
SMCO4-202ENST00000525141 CDC42BPAQ5VT25 1732 aa20.12■□□□□ 0.81
SMCO4-202ENST00000525141 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
SMCO4-202ENST00000525141 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-202ENST00000525141 PREX2Q70Z35 1606 aa20.11■□□□□ 0.81
SMCO4-202ENST00000525141 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
SMCO4-202ENST00000525141 KDM5CP41229 1560 aa20.1■□□□□ 0.81
SMCO4-202ENST00000525141 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.815e-7■■■■□ 25.9
SMCO4-202ENST00000525141 MLH3Q9UHC1 1453 aa20.08■□□□□ 0.81
SMCO4-202ENST00000525141 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
SMCO4-202ENST00000525141 C9orf84Q5VXU9 1444 aa20.07■□□□□ 0.8
SMCO4-202ENST00000525141 ABCC1P33527 1531 aa20.07■□□□□ 0.8
SMCO4-202ENST00000525141 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
SMCO4-202ENST00000525141 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
SMCO4-202ENST00000525141 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
SMCO4-202ENST00000525141 ZNF644Q9H582 1327 aaPredicted RBP20.05■□□□□ 0.8
SMCO4-202ENST00000525141 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
SMCO4-202ENST00000525141 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
SMCO4-202ENST00000525141 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
SMCO4-202ENST00000525141 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.8
SMCO4-202ENST00000525141 DIP2CQ9Y2E4 1556 aa20.02■□□□□ 0.8
SMCO4-202ENST00000525141 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
SMCO4-202ENST00000525141 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
SMCO4-202ENST00000525141 ABCA6Q8N139 1617 aa19.99■□□□□ 0.79
SMCO4-202ENST00000525141 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
SMCO4-202ENST00000525141 LMTK3Q96Q04 1460 aa19.98■□□□□ 0.79
SMCO4-202ENST00000525141 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
SMCO4-202ENST00000525141 REREQ9P2R6 1566 aa19.96■□□□□ 0.79
SMCO4-202ENST00000525141 HSPA2P54652 639 aa19.96■□□□□ 0.79
SMCO4-202ENST00000525141 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
SMCO4-202ENST00000525141 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
SMCO4-202ENST00000525141 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
SMCO4-202ENST00000525141 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
SMCO4-202ENST00000525141 MBD5Q9P267 1494 aa19.94■□□□□ 0.78
SMCO4-202ENST00000525141 AGLP35573 1532 aa19.94■□□□□ 0.78
SMCO4-202ENST00000525141 MSH5O43196 834 aa19.94■□□□□ 0.78
SMCO4-202ENST00000525141 EHBP1L1Q8N3D4 1523 aa19.93■□□□□ 0.78
SMCO4-202ENST00000525141 ILDR1Q86SU0 546 aaPredicted RBP19.92■□□□□ 0.78
SMCO4-202ENST00000525141 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
SMCO4-202ENST00000525141 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
SMCO4-202ENST00000525141 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
SMCO4-202ENST00000525141 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-202ENST00000525141 ATP7AQ04656 1500 aa19.85■□□□□ 0.77
SMCO4-202ENST00000525141 SETD1BQ9UPS6 1966 aaKnown RBP19.84■□□□□ 0.77
SMCO4-202ENST00000525141 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.77
SMCO4-202ENST00000525141 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
SMCO4-202ENST00000525141 A2MP01023 1474 aa19.83■□□□□ 0.76
SMCO4-202ENST00000525141 RSPH4AQ5TD94 716 aa19.82■□□□□ 0.76
SMCO4-202ENST00000525141 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
SMCO4-202ENST00000525141 GGT6Q6P531 493 aa19.81■□□□□ 0.76
SMCO4-202ENST00000525141 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
SMCO4-202ENST00000525141 RTEL1-TNFRSF6BF6WH68 1400 aa19.81■□□□□ 0.76
SMCO4-202ENST00000525141 ZMYM3Q14202 1370 aa19.81■□□□□ 0.76
SMCO4-202ENST00000525141 C3P01024 1663 aa19.8■□□□□ 0.76
SMCO4-202ENST00000525141 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
SMCO4-202ENST00000525141 PLXNC1O60486 1568 aa19.78■□□□□ 0.76
SMCO4-202ENST00000525141 DHX29Q7Z478 1369 aaKnown RBP19.78■□□□□ 0.76
SMCO4-202ENST00000525141 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
SMCO4-202ENST00000525141 PREX1Q8TCU6 1659 aa19.75■□□□□ 0.75
SMCO4-202ENST00000525141 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
SMCO4-202ENST00000525141 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
SMCO4-202ENST00000525141 TSPY4P0CV99 314 aa19.73■□□□□ 0.75
SMCO4-202ENST00000525141 TSPY10P0CW01 314 aa19.73■□□□□ 0.75
SMCO4-202ENST00000525141 ADGBQ8N7X0 1667 aa19.72■□□□□ 0.75
SMCO4-202ENST00000525141 KIF3BO15066 747 aa19.72■□□□□ 0.75
SMCO4-202ENST00000525141 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
SMCO4-202ENST00000525141 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
SMCO4-202ENST00000525141 STRCQ7RTU9 1775 aa19.7■□□□□ 0.74
SMCO4-202ENST00000525141 MYOM3Q5VTT5 1437 aa19.69■□□□□ 0.74
SMCO4-202ENST00000525141 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
SMCO4-202ENST00000525141 CLTCQ00610 1675 aaKnown RBP19.68■□□□□ 0.74
SMCO4-202ENST00000525141 ADRA2BP18089 450 aa19.68■□□□□ 0.74
SMCO4-202ENST00000525141 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
SMCO4-202ENST00000525141 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
SMCO4-202ENST00000525141 APLP2Q06481 763 aa19.67■□□□□ 0.74
SMCO4-202ENST00000525141 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
SMCO4-202ENST00000525141 NPATQ14207 1427 aa19.67■□□□□ 0.74
SMCO4-202ENST00000525141 FBXO31Q5XUX0 539 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms