RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.34
AP001001.2-201ENST00000524966 MYO5CQ9NQX4 1742 aa17.17■□□□□ 0.34
AP001001.2-201ENST00000524966 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
AP001001.2-201ENST00000524966 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
AP001001.2-201ENST00000524966 CFAP74Q9C0B2 1584 aa17.16■□□□□ 0.34
AP001001.2-201ENST00000524966 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
AP001001.2-201ENST00000524966 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
AP001001.2-201ENST00000524966 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
AP001001.2-201ENST00000524966 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.33
AP001001.2-201ENST00000524966 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
AP001001.2-201ENST00000524966 ARHGAP5Q13017 1502 aa17.13■□□□□ 0.33
AP001001.2-201ENST00000524966 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
AP001001.2-201ENST00000524966 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
AP001001.2-201ENST00000524966 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
AP001001.2-201ENST00000524966 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
AP001001.2-201ENST00000524966 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
AP001001.2-201ENST00000524966 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
AP001001.2-201ENST00000524966 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
AP001001.2-201ENST00000524966 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
AP001001.2-201ENST00000524966 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
AP001001.2-201ENST00000524966 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
AP001001.2-201ENST00000524966 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.32
AP001001.2-201ENST00000524966 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
AP001001.2-201ENST00000524966 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
AP001001.2-201ENST00000524966 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
AP001001.2-201ENST00000524966 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
AP001001.2-201ENST00000524966 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
AP001001.2-201ENST00000524966 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
AP001001.2-201ENST00000524966 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
AP001001.2-201ENST00000524966 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
AP001001.2-201ENST00000524966 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
AP001001.2-201ENST00000524966 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
AP001001.2-201ENST00000524966 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
AP001001.2-201ENST00000524966 ABCC1P33527 1531 aa17.01■□□□□ 0.31
AP001001.2-201ENST00000524966 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
AP001001.2-201ENST00000524966 APLP2Q06481 763 aa17■□□□□ 0.31
AP001001.2-201ENST00000524966 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
AP001001.2-201ENST00000524966 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
AP001001.2-201ENST00000524966 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
AP001001.2-201ENST00000524966 KDM5CP41229 1560 aa16.99■□□□□ 0.31
AP001001.2-201ENST00000524966 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
AP001001.2-201ENST00000524966 ARHGEF40Q8TER5 1519 aa16.99■□□□□ 0.31
AP001001.2-201ENST00000524966 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
AP001001.2-201ENST00000524966 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
AP001001.2-201ENST00000524966 ATP10AO60312 1499 aa16.97■□□□□ 0.31
AP001001.2-201ENST00000524966 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
AP001001.2-201ENST00000524966 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
AP001001.2-201ENST00000524966 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
AP001001.2-201ENST00000524966 SYCP2Q9BX26 1530 aa16.95■□□□□ 0.3
AP001001.2-201ENST00000524966 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
AP001001.2-201ENST00000524966 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
AP001001.2-201ENST00000524966 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
AP001001.2-201ENST00000524966 SIGLEC1Q9BZZ2 1709 aa16.92■□□□□ 0.3
AP001001.2-201ENST00000524966 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
AP001001.2-201ENST00000524966 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
AP001001.2-201ENST00000524966 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
AP001001.2-201ENST00000524966 RSPH4AQ5TD94 716 aa16.9■□□□□ 0.3
AP001001.2-201ENST00000524966 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
AP001001.2-201ENST00000524966 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
AP001001.2-201ENST00000524966 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
AP001001.2-201ENST00000524966 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
AP001001.2-201ENST00000524966 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
AP001001.2-201ENST00000524966 MLECQ14165 292 aa16.87■□□□□ 0.29
AP001001.2-201ENST00000524966 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
AP001001.2-201ENST00000524966 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
AP001001.2-201ENST00000524966 RTEL1-TNFRSF6BF6WH68 1400 aa16.84■□□□□ 0.29
AP001001.2-201ENST00000524966 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
AP001001.2-201ENST00000524966 PTPRMP28827 1452 aa16.83■□□□□ 0.28
AP001001.2-201ENST00000524966 MADDQ8WXG6 1647 aa16.82■□□□□ 0.28
AP001001.2-201ENST00000524966 INO80Q9ULG1 1556 aaPredicted RBP16.82■□□□□ 0.28
AP001001.2-201ENST00000524966 AGLP35573 1532 aa16.82■□□□□ 0.28
AP001001.2-201ENST00000524966 CCDC141Q6ZP82 1450 aa16.82■□□□□ 0.28
AP001001.2-201ENST00000524966 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
AP001001.2-201ENST00000524966 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
AP001001.2-201ENST00000524966 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
AP001001.2-201ENST00000524966 A2MP01023 1474 aa16.79■□□□□ 0.28
AP001001.2-201ENST00000524966 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
AP001001.2-201ENST00000524966 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.27
AP001001.2-201ENST00000524966 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
AP001001.2-201ENST00000524966 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
AP001001.2-201ENST00000524966 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
AP001001.2-201ENST00000524966 PLXNC1O60486 1568 aa16.75■□□□□ 0.27
AP001001.2-201ENST00000524966 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
AP001001.2-201ENST00000524966 ABCC5O15440 1437 aa16.74■□□□□ 0.27
AP001001.2-201ENST00000524966 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
AP001001.2-201ENST00000524966 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
AP001001.2-201ENST00000524966 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
AP001001.2-201ENST00000524966 GGT6Q6P531 493 aa16.71■□□□□ 0.27
AP001001.2-201ENST00000524966 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
AP001001.2-201ENST00000524966 KIF3BO15066 747 aa16.7■□□□□ 0.26
AP001001.2-201ENST00000524966 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
AP001001.2-201ENST00000524966 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
AP001001.2-201ENST00000524966 DAPK1P53355 1430 aa16.69■□□□□ 0.26
AP001001.2-201ENST00000524966 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
AP001001.2-201ENST00000524966 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
AP001001.2-201ENST00000524966 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
AP001001.2-201ENST00000524966 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
AP001001.2-201ENST00000524966 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
AP001001.2-201ENST00000524966 SHANK2Q9UPX8 1470 aa16.66■□□□□ 0.26
AP001001.2-201ENST00000524966 ZMYM3Q14202 1370 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms