RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
TSPAN4-213ENST00000524895 ARAP3Q8WWN8 1544 aa24.22■■□□□ 1.47
TSPAN4-213ENST00000524895 CD109Q6YHK3 1445 aa24.22■■□□□ 1.47
TSPAN4-213ENST00000524895 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
TSPAN4-213ENST00000524895 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-213ENST00000524895 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
TSPAN4-213ENST00000524895 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
TSPAN4-213ENST00000524895 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-213ENST00000524895 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
TSPAN4-213ENST00000524895 CFAP74Q9C0B2 1584 aa24.15■■□□□ 1.46
TSPAN4-213ENST00000524895 FANCAO15360 1455 aa24.14■■□□□ 1.46
TSPAN4-213ENST00000524895 EFCAB2Q5VUJ9 269 aa24.14■■□□□ 1.45
TSPAN4-213ENST00000524895 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.45
TSPAN4-213ENST00000524895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.454e-6■■■■■ 46.2
TSPAN4-213ENST00000524895 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-213ENST00000524895 PLEKHH2Q8IVE3 1493 aa24.09■■□□□ 1.45
TSPAN4-213ENST00000524895 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-213ENST00000524895 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
TSPAN4-213ENST00000524895 PPRC1Q5VV67 1664 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-213ENST00000524895 TEX14Q8IWB6 1497 aa24.07■■□□□ 1.44
TSPAN4-213ENST00000524895 ABCC1P33527 1531 aa24.07■■□□□ 1.44
TSPAN4-213ENST00000524895 NEO1Q92859 1461 aa24.07■■□□□ 1.44
TSPAN4-213ENST00000524895 SYCP2Q9BX26 1530 aa24.06■■□□□ 1.44
TSPAN4-213ENST00000524895 AKNAQ7Z591 1439 aa24.04■■□□□ 1.44
TSPAN4-213ENST00000524895 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
TSPAN4-213ENST00000524895 DNMT1P26358 1616 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-213ENST00000524895 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
TSPAN4-213ENST00000524895 ARHGEF5Q12774 1597 aa24.02■■□□□ 1.44
TSPAN4-213ENST00000524895 ITGAEP38570 1179 aa24.01■■□□□ 1.43
TSPAN4-213ENST00000524895 DAPK1P53355 1430 aa24■■□□□ 1.43
TSPAN4-213ENST00000524895 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
TSPAN4-213ENST00000524895 MBD5Q9P267 1494 aa23.99■■□□□ 1.43
TSPAN4-213ENST00000524895 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
TSPAN4-213ENST00000524895 HNRNPMP52272 730 aaKnown RBP eCLIP23.98■■□□□ 1.43
TSPAN4-213ENST00000524895 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
TSPAN4-213ENST00000524895 CROCC2H7BZ55 1655 aa23.98■■□□□ 1.43
TSPAN4-213ENST00000524895 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
TSPAN4-213ENST00000524895 ABCC5O15440 1437 aa23.96■■□□□ 1.43
TSPAN4-213ENST00000524895 RSPH4AQ5TD94 716 aa23.94■■□□□ 1.42
TSPAN4-213ENST00000524895 SHANK2Q9UPX8 1470 aa23.94■■□□□ 1.42
TSPAN4-213ENST00000524895 TRAPPC8Q9Y2L5 1435 aa23.93■■□□□ 1.42
TSPAN4-213ENST00000524895 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-213ENST00000524895 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
TSPAN4-213ENST00000524895 POGZQ7Z3K3 1410 aa23.91■■□□□ 1.42
TSPAN4-213ENST00000524895 ZNF518AQ6AHZ1 1483 aa23.9■■□□□ 1.42
TSPAN4-213ENST00000524895 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
TSPAN4-213ENST00000524895 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.41
TSPAN4-213ENST00000524895 TSPY4P0CV99 314 aa23.88■■□□□ 1.41
TSPAN4-213ENST00000524895 TSPY10P0CW01 314 aa23.88■■□□□ 1.41
TSPAN4-213ENST00000524895 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
TSPAN4-213ENST00000524895 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
TSPAN4-213ENST00000524895 RICTORQ6R327 1708 aa23.85■■□□□ 1.41
TSPAN4-213ENST00000524895 AFAP1Q8N556 730 aa23.85■■□□□ 1.41
TSPAN4-213ENST00000524895 KDM5CP41229 1560 aa23.85■■□□□ 1.41
TSPAN4-213ENST00000524895 ADGRL2O95490 1459 aa23.83■■□□□ 1.41
TSPAN4-213ENST00000524895 ZFYVE16Q7Z3T8 1539 aa23.83■■□□□ 1.41
TSPAN4-213ENST00000524895 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.4
TSPAN4-213ENST00000524895 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
TSPAN4-213ENST00000524895 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-213ENST00000524895 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
TSPAN4-213ENST00000524895 RAPGEF3O95398 923 aa23.81■■□□□ 1.4
TSPAN4-213ENST00000524895 HECW2Q9P2P5 1572 aa23.81■■□□□ 1.4
TSPAN4-213ENST00000524895 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
TSPAN4-213ENST00000524895 ATP7AQ04656 1500 aa23.8■■□□□ 1.4
TSPAN4-213ENST00000524895 PLXNC1O60486 1568 aa23.79■■□□□ 1.4
TSPAN4-213ENST00000524895 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
TSPAN4-213ENST00000524895 ZMYM4Q5VZL5 1548 aa23.78■■□□□ 1.4
TSPAN4-213ENST00000524895 KDM6BO15054 1643 aa23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 GCC2Q8IWJ2 1684 aa23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 COL17A1Q9UMD9 1497 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
TSPAN4-213ENST00000524895 MLH3Q9UHC1 1453 aa23.76■■□□□ 1.39
TSPAN4-213ENST00000524895 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
TSPAN4-213ENST00000524895 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
TSPAN4-213ENST00000524895 KIF15Q9NS87 1388 aa23.74■■□□□ 1.39
TSPAN4-213ENST00000524895 NAIPQ13075 1403 aa23.74■■□□□ 1.39
TSPAN4-213ENST00000524895 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
TSPAN4-213ENST00000524895 MAGI2Q86UL8 1455 aa23.7■■□□□ 1.38
TSPAN4-213ENST00000524895 ABCA6Q8N139 1617 aa23.69■■□□□ 1.38
TSPAN4-213ENST00000524895 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
TSPAN4-213ENST00000524895 DIP2CQ9Y2E4 1556 aa23.66■■□□□ 1.38
TSPAN4-213ENST00000524895 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
TSPAN4-213ENST00000524895 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
TSPAN4-213ENST00000524895 YEATS2Q9ULM3 1422 aa23.65■■□□□ 1.38
TSPAN4-213ENST00000524895 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
TSPAN4-213ENST00000524895 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
TSPAN4-213ENST00000524895 A2MP01023 1474 aa23.62■■□□□ 1.37
TSPAN4-213ENST00000524895 DHX29Q7Z478 1369 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-213ENST00000524895 ATP10AO60312 1499 aa23.57■■□□□ 1.36
TSPAN4-213ENST00000524895 EIF2AK4Q9P2K8 1649 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-213ENST00000524895 HRCP23327 699 aa23.55■■□□□ 1.36
TSPAN4-213ENST00000524895 REREQ9P2R6 1566 aa23.55■■□□□ 1.36
TSPAN4-213ENST00000524895 ACIN1Q9UKV3 1341 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-213ENST00000524895 UNC13BO14795 1591 aa23.5■■□□□ 1.35
TSPAN4-213ENST00000524895 BCORL1Q5H9F3 1711 aa23.5■■□□□ 1.35
TSPAN4-213ENST00000524895 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
TSPAN4-213ENST00000524895 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
TSPAN4-213ENST00000524895 KIF3BO15066 747 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms