RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 PPP4R2Q9NY27 417 aa25.12■■□□□ 1.61
PCDHB18P-201ENST00000524813 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
PCDHB18P-201ENST00000524813 CARMIL2Q6F5E8 1435 aa25.1■■□□□ 1.61
PCDHB18P-201ENST00000524813 CCDC184Q52MB2 194 aa25.09■■□□□ 1.61
PCDHB18P-201ENST00000524813 EIF4G2P78344 907 aaKnown RBP eCLIP25.08■■□□□ 1.61
PCDHB18P-201ENST00000524813 CNTLNQ9NXG0 1405 aa25.07■■□□□ 1.6
PCDHB18P-201ENST00000524813 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
PCDHB18P-201ENST00000524813 RAPGEF6Q8TEU7 1601 aa25.07■■□□□ 1.6
PCDHB18P-201ENST00000524813 RRP7BPQ9NSQ0 103 aa25.06■■□□□ 1.6
PCDHB18P-201ENST00000524813 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
PCDHB18P-201ENST00000524813 EPRSP07814 1512 aaKnown RBP25.05■■□□□ 1.6
PCDHB18P-201ENST00000524813 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
PCDHB18P-201ENST00000524813 DENND4BO75064 1496 aaPredicted RBP25.03■■□□□ 1.6
PCDHB18P-201ENST00000524813 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
PCDHB18P-201ENST00000524813 CHIC2Q9UKJ5 165 aa25.02■■□□□ 1.6
PCDHB18P-201ENST00000524813 PLB1Q6P1J6 1458 aa25.01■■□□□ 1.59
PCDHB18P-201ENST00000524813 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
PCDHB18P-201ENST00000524813 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
PCDHB18P-201ENST00000524813 PRKRIP1Q9H875 184 aaPredicted RBP25■■□□□ 1.59
PCDHB18P-201ENST00000524813 SHROOM2Q13796 1616 aa24.99■■□□□ 1.59
PCDHB18P-201ENST00000524813 NUP153P49790 1475 aaKnown RBP24.99■■□□□ 1.59
PCDHB18P-201ENST00000524813 C11orf95C9JLR9 678 aaPredicted RBP24.98■■□□□ 1.59
PCDHB18P-201ENST00000524813 B4GALNT3Q6L9W6 998 aa24.97■■□□□ 1.59
PCDHB18P-201ENST00000524813 CCDC7Q96M83 1385 aa24.96■■□□□ 1.59
PCDHB18P-201ENST00000524813 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
PCDHB18P-201ENST00000524813 MRS2Q9HD23 443 aa24.96■■□□□ 1.59
PCDHB18P-201ENST00000524813 ZBED9Q6R2W3 1325 aa24.96■■□□□ 1.59
PCDHB18P-201ENST00000524813 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
PCDHB18P-201ENST00000524813 NCOA1Q15788 1441 aa24.95■■□□□ 1.59
PCDHB18P-201ENST00000524813 L3MBTL2Q969R5 705 aa24.95■■□□□ 1.59
PCDHB18P-201ENST00000524813 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
PCDHB18P-201ENST00000524813 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
PCDHB18P-201ENST00000524813 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
PCDHB18P-201ENST00000524813 TCOF1Q13428 1488 aaKnown RBP24.93■■□□□ 1.58
PCDHB18P-201ENST00000524813 KDM6BO15054 1643 aa24.93■■□□□ 1.58
PCDHB18P-201ENST00000524813 AKNAQ7Z591 1439 aa24.89■■□□□ 1.58
PCDHB18P-201ENST00000524813 FOXD1Q16676 465 aa24.88■■□□□ 1.57
PCDHB18P-201ENST00000524813 ABCA8O94911 1581 aa24.88■■□□□ 1.57
PCDHB18P-201ENST00000524813 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
PCDHB18P-201ENST00000524813 PTPRGP23470 1445 aa24.86■■□□□ 1.57
PCDHB18P-201ENST00000524813 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
PCDHB18P-201ENST00000524813 KIF7Q2M1P5 1343 aa24.81■■□□□ 1.56
PCDHB18P-201ENST00000524813 DEKP35659 375 aaKnown RBP24.78■■□□□ 1.56
PCDHB18P-201ENST00000524813 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
PCDHB18P-201ENST00000524813 ANKRD30BQ9BXX2 1392 aa24.77■■□□□ 1.56
PCDHB18P-201ENST00000524813 NOP58Q9Y2X3 529 aaKnown RBP24.76■■□□□ 1.55
PCDHB18P-201ENST00000524813 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
PCDHB18P-201ENST00000524813 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
PCDHB18P-201ENST00000524813 TEX14Q8IWB6 1497 aa24.75■■□□□ 1.55
PCDHB18P-201ENST00000524813 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
PCDHB18P-201ENST00000524813 ATP10BO94823 1461 aa24.73■■□□□ 1.55
PCDHB18P-201ENST00000524813 KIF14Q15058 1648 aa24.72■■□□□ 1.55
PCDHB18P-201ENST00000524813 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
PCDHB18P-201ENST00000524813 POLR1AO95602 1720 aaPredicted RBP24.71■■□□□ 1.55
PCDHB18P-201ENST00000524813 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
PCDHB18P-201ENST00000524813 NUDCQ9Y266 331 aa24.67■■□□□ 1.54
PCDHB18P-201ENST00000524813 ABCC2Q92887 1545 aa24.66■■□□□ 1.54
PCDHB18P-201ENST00000524813 ADCY10Q96PN6 1610 aa24.66■■□□□ 1.54
PCDHB18P-201ENST00000524813 NBR1Q14596 966 aa24.66■■□□□ 1.54
PCDHB18P-201ENST00000524813 OSCARQ8IYS5 282 aa24.66■■□□□ 1.54
PCDHB18P-201ENST00000524813 ROCK1Q13464 1354 aa24.65■■□□□ 1.54
PCDHB18P-201ENST00000524813 RNF123Q5XPI4 1314 aa24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 DAPK1P53355 1430 aa24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
PCDHB18P-201ENST00000524813 PLEKHD1A6NEE1 506 aa24.62■■□□□ 1.53
PCDHB18P-201ENST00000524813 ABCC5O15440 1437 aa24.59■■□□□ 1.53
PCDHB18P-201ENST00000524813 ITSN2Q9NZM3 1697 aa24.58■■□□□ 1.53
PCDHB18P-201ENST00000524813 ANP32AP39687 249 aaKnown RBP24.58■■□□□ 1.52
PCDHB18P-201ENST00000524813 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.52
PCDHB18P-201ENST00000524813 IPO9Q96P70 1041 aaKnown RBP24.57■■□□□ 1.52
PCDHB18P-201ENST00000524813 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
PCDHB18P-201ENST00000524813 ZCCHC11Q5TAX3 1644 aaKnown RBP24.55■■□□□ 1.52
PCDHB18P-201ENST00000524813 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
PCDHB18P-201ENST00000524813 CDC42BPAQ5VT25 1732 aa24.53■■□□□ 1.52
PCDHB18P-201ENST00000524813 SENP3-EIF4A1A0A087X0R7 540 aa24.53■■□□□ 1.52
PCDHB18P-201ENST00000524813 USP47Q96K76 1375 aa24.53■■□□□ 1.52
PCDHB18P-201ENST00000524813 BCORL1Q5H9F3 1711 aa24.53■■□□□ 1.52
PCDHB18P-201ENST00000524813 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
PCDHB18P-201ENST00000524813 UHRF1BP1LA0JNW5 1464 aa24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 MBD5Q9P267 1494 aa24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 PZPP20742 1482 aa24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 PNISRQ8TF01 805 aaKnown RBP24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 ZBTB47Q9UFB7 747 aaPredicted RBP24.5■■□□□ 1.51
PCDHB18P-201ENST00000524813 ABCC10Q5T3U5 1492 aa24.49■■□□□ 1.51
PCDHB18P-201ENST00000524813 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
PCDHB18P-201ENST00000524813 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
PCDHB18P-201ENST00000524813 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
PCDHB18P-201ENST00000524813 TMC1Q8TDI8 760 aa24.46■■□□□ 1.51
PCDHB18P-201ENST00000524813 ARID4BQ4LE39 1312 aaPredicted RBP24.46■■□□□ 1.51
PCDHB18P-201ENST00000524813 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
PCDHB18P-201ENST00000524813 KDM5CP41229 1560 aa24.43■■□□□ 1.5
PCDHB18P-201ENST00000524813 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
PCDHB18P-201ENST00000524813 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
PCDHB18P-201ENST00000524813 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.5
PCDHB18P-201ENST00000524813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.49
PCDHB18P-201ENST00000524813 PREX2Q70Z35 1606 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms