RNA–Protein interactions for RNA: ENST00000524691.1

CCDC190-204, Transcript of coiled-coil domain containing 190, humanhuman

TSL 1 (best)

Gene CCDC190, Length 876 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190-204ENST00000524691 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
CCDC190-204ENST00000524691 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
CCDC190-204ENST00000524691 TMEM92Q6UXU6 159 aa12.13□□□□□ -0.47
CCDC190-204ENST00000524691 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
CCDC190-204ENST00000524691 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
CCDC190-204ENST00000524691 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
CCDC190-204ENST00000524691 RGL2O15211 777 aa12.05□□□□□ -0.48
CCDC190-204ENST00000524691 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
CCDC190-204ENST00000524691 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
CCDC190-204ENST00000524691 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
CCDC190-204ENST00000524691 PKD2Q13563 968 aa12.03□□□□□ -0.48
CCDC190-204ENST00000524691 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
CCDC190-204ENST00000524691 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
CCDC190-204ENST00000524691 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
CCDC190-204ENST00000524691 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
CCDC190-204ENST00000524691 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC190-204ENST00000524691 ZNF687Q8N1G0 1237 aa11.91□□□□□ -0.5
CCDC190-204ENST00000524691 KIF3CO14782 793 aa11.88□□□□□ -0.51
CCDC190-204ENST00000524691 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
CCDC190-204ENST00000524691 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
CCDC190-204ENST00000524691 NUDT7P0C024 238 aa11.85□□□□□ -0.51
CCDC190-204ENST00000524691 PPP1R37O75864 691 aa11.83□□□□□ -0.52
CCDC190-204ENST00000524691 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
CCDC190-204ENST00000524691 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
CCDC190-204ENST00000524691 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
CCDC190-204ENST00000524691 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
CCDC190-204ENST00000524691 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
CCDC190-204ENST00000524691 SLC34A2O95436 690 aa11.76□□□□□ -0.53
CCDC190-204ENST00000524691 PTGER2P43116 358 aa11.76□□□□□ -0.53
CCDC190-204ENST00000524691 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CCDC190-204ENST00000524691 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC190-204ENST00000524691 PBX2P40425 430 aa11.71□□□□□ -0.53
CCDC190-204ENST00000524691 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
CCDC190-204ENST00000524691 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
CCDC190-204ENST00000524691 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
CCDC190-204ENST00000524691 FOXK1P85037 733 aa11.66□□□□□ -0.54
CCDC190-204ENST00000524691 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
CCDC190-204ENST00000524691 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
CCDC190-204ENST00000524691 TBC1D12O60347 775 aa11.63□□□□□ -0.55
CCDC190-204ENST00000524691 DSG2Q14126 1118 aa11.63□□□□□ -0.55
CCDC190-204ENST00000524691 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
CCDC190-204ENST00000524691 POTEEQ6S8J3 1075 aa11.62□□□□□ -0.55
CCDC190-204ENST00000524691 ARHGAP33O14559 1287 aa11.6□□□□□ -0.55
CCDC190-204ENST00000524691 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
CCDC190-204ENST00000524691 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
CCDC190-204ENST00000524691 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
CCDC190-204ENST00000524691 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC190-204ENST00000524691 ADGRD1Q6QNK2 874 aa11.56□□□□□ -0.56
CCDC190-204ENST00000524691 KCNH8Q96L42 1107 aa11.55□□□□□ -0.56
CCDC190-204ENST00000524691 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
CCDC190-204ENST00000524691 PSEN2P49810 448 aa11.54□□□□□ -0.56
CCDC190-204ENST00000524691 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
CCDC190-204ENST00000524691 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
CCDC190-204ENST00000524691 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
CCDC190-204ENST00000524691 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
CCDC190-204ENST00000524691 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
CCDC190-204ENST00000524691 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
CCDC190-204ENST00000524691 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
CCDC190-204ENST00000524691 TK2O00142 265 aa11.47□□□□□ -0.57
CCDC190-204ENST00000524691 PDE4AP27815 886 aa11.47□□□□□ -0.57
CCDC190-204ENST00000524691 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
CCDC190-204ENST00000524691 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
CCDC190-204ENST00000524691 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
CCDC190-204ENST00000524691 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
CCDC190-204ENST00000524691 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
CCDC190-204ENST00000524691 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
CCDC190-204ENST00000524691 HRO43593 1189 aa11.41□□□□□ -0.58
CCDC190-204ENST00000524691 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
CCDC190-204ENST00000524691 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
CCDC190-204ENST00000524691 EVI5O60447 810 aa11.37□□□□□ -0.59
CCDC190-204ENST00000524691 PTPREP23469 700 aa11.37□□□□□ -0.59
CCDC190-204ENST00000524691 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
CCDC190-204ENST00000524691 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
CCDC190-204ENST00000524691 FOSBP53539 338 aa11.35□□□□□ -0.59
CCDC190-204ENST00000524691 VPS9D1Q9Y2B5 631 aa11.35□□□□□ -0.59
CCDC190-204ENST00000524691 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
CCDC190-204ENST00000524691 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
CCDC190-204ENST00000524691 PTPN5P54829 565 aa11.31□□□□□ -0.6
CCDC190-204ENST00000524691 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
CCDC190-204ENST00000524691 MFSD10Q14728 455 aa11.3□□□□□ -0.6
CCDC190-204ENST00000524691 ADAM33Q9BZ11 813 aa11.28□□□□□ -0.6
CCDC190-204ENST00000524691 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
CCDC190-204ENST00000524691 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
CCDC190-204ENST00000524691 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
CCDC190-204ENST00000524691 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
CCDC190-204ENST00000524691 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
CCDC190-204ENST00000524691 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
CCDC190-204ENST00000524691 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
CCDC190-204ENST00000524691 WNT2BQ93097 391 aa11.23□□□□□ -0.61
CCDC190-204ENST00000524691 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
CCDC190-204ENST00000524691 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
CCDC190-204ENST00000524691 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
CCDC190-204ENST00000524691 PPP1R3GB7ZBB8 358 aa11.19□□□□□ -0.62
CCDC190-204ENST00000524691 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
CCDC190-204ENST00000524691 PHF14O94880 888 aa11.17□□□□□ -0.62
CCDC190-204ENST00000524691 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
CCDC190-204ENST00000524691 DPYSL4O14531 572 aa11.16□□□□□ -0.62
CCDC190-204ENST00000524691 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
CCDC190-204ENST00000524691 COL9A1P20849 921 aa11.14□□□□□ -0.63
CCDC190-204ENST00000524691 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms