RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
SCUBE2-208ENST00000524317 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
SCUBE2-208ENST00000524317 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
SCUBE2-208ENST00000524317 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
SCUBE2-208ENST00000524317 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.31
SCUBE2-208ENST00000524317 RAPGEF6Q8TEU7 1601 aa17.01■□□□□ 0.31
SCUBE2-208ENST00000524317 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
SCUBE2-208ENST00000524317 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
SCUBE2-208ENST00000524317 PLB1Q6P1J6 1458 aa17■□□□□ 0.31
SCUBE2-208ENST00000524317 PTPN23Q9H3S7 1636 aa17■□□□□ 0.31
SCUBE2-208ENST00000524317 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
SCUBE2-208ENST00000524317 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
SCUBE2-208ENST00000524317 NAIPQ13075 1403 aa16.96■□□□□ 0.31
SCUBE2-208ENST00000524317 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-208ENST00000524317 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-208ENST00000524317 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
SCUBE2-208ENST00000524317 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
SCUBE2-208ENST00000524317 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
SCUBE2-208ENST00000524317 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
SCUBE2-208ENST00000524317 ABCA8O94911 1581 aa16.88■□□□□ 0.29
SCUBE2-208ENST00000524317 AKNAQ7Z591 1439 aa16.88■□□□□ 0.29
SCUBE2-208ENST00000524317 NEUROD1Q13562 356 aa16.87■□□□□ 0.29
SCUBE2-208ENST00000524317 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
SCUBE2-208ENST00000524317 PTPRGP23470 1445 aa16.86■□□□□ 0.29
SCUBE2-208ENST00000524317 ATP10BO94823 1461 aa16.85■□□□□ 0.29
SCUBE2-208ENST00000524317 C14orf37Q86TY3 774 aa16.84■□□□□ 0.29
SCUBE2-208ENST00000524317 DAPK1P53355 1430 aa16.83■□□□□ 0.29
SCUBE2-208ENST00000524317 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
SCUBE2-208ENST00000524317 ABCC5O15440 1437 aa16.83■□□□□ 0.28
SCUBE2-208ENST00000524317 GPATCH8Q9UKJ3 1502 aaKnown RBP16.83■□□□□ 0.28
SCUBE2-208ENST00000524317 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
SCUBE2-208ENST00000524317 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
SCUBE2-208ENST00000524317 CHD1O14646 1710 aa16.81■□□□□ 0.28
SCUBE2-208ENST00000524317 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
SCUBE2-208ENST00000524317 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
SCUBE2-208ENST00000524317 KIF14Q15058 1648 aa16.8■□□□□ 0.28
SCUBE2-208ENST00000524317 ADCY10Q96PN6 1610 aa16.79■□□□□ 0.28
SCUBE2-208ENST00000524317 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
SCUBE2-208ENST00000524317 CAMSAP2Q08AD1 1489 aa16.77■□□□□ 0.28
SCUBE2-208ENST00000524317 GCC2Q8IWJ2 1684 aa16.77■□□□□ 0.27
SCUBE2-208ENST00000524317 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
SCUBE2-208ENST00000524317 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
SCUBE2-208ENST00000524317 ABCC10Q5T3U5 1492 aa16.76■□□□□ 0.27
SCUBE2-208ENST00000524317 KDM6BO15054 1643 aa16.75■□□□□ 0.27
SCUBE2-208ENST00000524317 MIER1Q8N108 512 aa16.75■□□□□ 0.27
SCUBE2-208ENST00000524317 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
SCUBE2-208ENST00000524317 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
SCUBE2-208ENST00000524317 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
SCUBE2-208ENST00000524317 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
SCUBE2-208ENST00000524317 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
SCUBE2-208ENST00000524317 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
SCUBE2-208ENST00000524317 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
SCUBE2-208ENST00000524317 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
SCUBE2-208ENST00000524317 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
SCUBE2-208ENST00000524317 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
SCUBE2-208ENST00000524317 ADGRL2O95490 1459 aa16.66■□□□□ 0.26
SCUBE2-208ENST00000524317 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
SCUBE2-208ENST00000524317 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
SCUBE2-208ENST00000524317 FOXD1Q16676 465 aa16.63■□□□□ 0.25
SCUBE2-208ENST00000524317 CDC42BPAQ5VT25 1732 aa16.63■□□□□ 0.25
SCUBE2-208ENST00000524317 NPM2Q86SE8 214 aaKnown RBP16.62■□□□□ 0.25
SCUBE2-208ENST00000524317 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
SCUBE2-208ENST00000524317 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
SCUBE2-208ENST00000524317 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
SCUBE2-208ENST00000524317 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
SCUBE2-208ENST00000524317 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCUBE2-208ENST00000524317 MBD5Q9P267 1494 aa16.59■□□□□ 0.25
SCUBE2-208ENST00000524317 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
SCUBE2-208ENST00000524317 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
SCUBE2-208ENST00000524317 CROCC2H7BZ55 1655 aa16.58■□□□□ 0.25
SCUBE2-208ENST00000524317 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.24
SCUBE2-208ENST00000524317 ANKRD50Q9ULJ7 1429 aa16.58■□□□□ 0.24
SCUBE2-208ENST00000524317 PZPP20742 1482 aa16.57■□□□□ 0.24
SCUBE2-208ENST00000524317 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
SCUBE2-208ENST00000524317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCUBE2-208ENST00000524317 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
SCUBE2-208ENST00000524317 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
SCUBE2-208ENST00000524317 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
SCUBE2-208ENST00000524317 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
SCUBE2-208ENST00000524317 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
SCUBE2-208ENST00000524317 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
SCUBE2-208ENST00000524317 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
SCUBE2-208ENST00000524317 CCDC141Q6ZP82 1450 aa16.53■□□□□ 0.24
SCUBE2-208ENST00000524317 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
SCUBE2-208ENST00000524317 RPRD2Q5VT52 1461 aaKnown RBP16.53■□□□□ 0.24
SCUBE2-208ENST00000524317 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
SCUBE2-208ENST00000524317 KIF15Q9NS87 1388 aa16.52■□□□□ 0.24
SCUBE2-208ENST00000524317 ARHGAP5Q13017 1502 aa16.51■□□□□ 0.23
SCUBE2-208ENST00000524317 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
SCUBE2-208ENST00000524317 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
SCUBE2-208ENST00000524317 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
SCUBE2-208ENST00000524317 ZCCHC11Q5TAX3 1644 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-208ENST00000524317 PKD2Q13563 968 aa16.48■□□□□ 0.23
SCUBE2-208ENST00000524317 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
SCUBE2-208ENST00000524317 NUP155O75694 1391 aa16.48■□□□□ 0.23
SCUBE2-208ENST00000524317 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
SCUBE2-208ENST00000524317 PLCH2O75038 1416 aa16.47■□□□□ 0.23
SCUBE2-208ENST00000524317 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
SCUBE2-208ENST00000524317 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
SCUBE2-208ENST00000524317 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms