RNA–Protein interactions for RNA: ENST00000524205.3

CDRT4-203, CMT1A duplicated region transcript 4, humanhuman

APPRIS ALT2 TSL 2

Gene CDRT4, Length 632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-203ENST00000524205 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
CDRT4-203ENST00000524205 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
CDRT4-203ENST00000524205 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
CDRT4-203ENST00000524205 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
CDRT4-203ENST00000524205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDRT4-203ENST00000524205 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
CDRT4-203ENST00000524205 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
CDRT4-203ENST00000524205 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
CDRT4-203ENST00000524205 TROQ12816 1431 aaPredicted RBP16.52■□□□□ 0.23
CDRT4-203ENST00000524205 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
CDRT4-203ENST00000524205 KDM6BO15054 1643 aa16.51■□□□□ 0.23
CDRT4-203ENST00000524205 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
CDRT4-203ENST00000524205 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
CDRT4-203ENST00000524205 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
CDRT4-203ENST00000524205 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
CDRT4-203ENST00000524205 PPARGC1BQ86YN6 1023 aaKnown RBP16.46■□□□□ 0.23
CDRT4-203ENST00000524205 APLP2Q06481 763 aa16.45■□□□□ 0.22
CDRT4-203ENST00000524205 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
CDRT4-203ENST00000524205 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
CDRT4-203ENST00000524205 CDC42BPAQ5VT25 1732 aa16.44■□□□□ 0.22
CDRT4-203ENST00000524205 CDC42BPBQ9Y5S2 1711 aa16.44■□□□□ 0.22
CDRT4-203ENST00000524205 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
CDRT4-203ENST00000524205 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
CDRT4-203ENST00000524205 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
CDRT4-203ENST00000524205 FANCAO15360 1455 aa16.4■□□□□ 0.22
CDRT4-203ENST00000524205 PLCH2O75038 1416 aa16.39■□□□□ 0.21
CDRT4-203ENST00000524205 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
CDRT4-203ENST00000524205 PREX2Q70Z35 1606 aa16.38■□□□□ 0.21
CDRT4-203ENST00000524205 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
CDRT4-203ENST00000524205 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
CDRT4-203ENST00000524205 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
CDRT4-203ENST00000524205 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
CDRT4-203ENST00000524205 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
CDRT4-203ENST00000524205 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
CDRT4-203ENST00000524205 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
CDRT4-203ENST00000524205 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
CDRT4-203ENST00000524205 NEO1Q92859 1461 aa16.34■□□□□ 0.21
CDRT4-203ENST00000524205 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
CDRT4-203ENST00000524205 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
CDRT4-203ENST00000524205 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
CDRT4-203ENST00000524205 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
CDRT4-203ENST00000524205 RICTORQ6R327 1708 aa16.32■□□□□ 0.2
CDRT4-203ENST00000524205 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
CDRT4-203ENST00000524205 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
CDRT4-203ENST00000524205 ARAP3Q8WWN8 1544 aa16.31■□□□□ 0.2
CDRT4-203ENST00000524205 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
CDRT4-203ENST00000524205 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
CDRT4-203ENST00000524205 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.26e-15■■■■■ 29
CDRT4-203ENST00000524205 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
CDRT4-203ENST00000524205 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
CDRT4-203ENST00000524205 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
CDRT4-203ENST00000524205 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
CDRT4-203ENST00000524205 ABCC1P33527 1531 aa16.28■□□□□ 0.2
CDRT4-203ENST00000524205 SYCP2Q9BX26 1530 aa16.28■□□□□ 0.2
CDRT4-203ENST00000524205 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
CDRT4-203ENST00000524205 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CDRT4-203ENST00000524205 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
CDRT4-203ENST00000524205 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
CDRT4-203ENST00000524205 SIGLEC1Q9BZZ2 1709 aa16.23■□□□□ 0.19
CDRT4-203ENST00000524205 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
CDRT4-203ENST00000524205 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
CDRT4-203ENST00000524205 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
CDRT4-203ENST00000524205 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
CDRT4-203ENST00000524205 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
CDRT4-203ENST00000524205 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
CDRT4-203ENST00000524205 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
CDRT4-203ENST00000524205 ZMYM4Q5VZL5 1548 aa16.17■□□□□ 0.18
CDRT4-203ENST00000524205 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
CDRT4-203ENST00000524205 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
CDRT4-203ENST00000524205 KIDINS220Q9ULH0 1771 aa16.16■□□□□ 0.18
CDRT4-203ENST00000524205 KDM5CP41229 1560 aa16.16■□□□□ 0.18
CDRT4-203ENST00000524205 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
CDRT4-203ENST00000524205 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
CDRT4-203ENST00000524205 MBD5Q9P267 1494 aa16.15■□□□□ 0.18
CDRT4-203ENST00000524205 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.17
CDRT4-203ENST00000524205 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
CDRT4-203ENST00000524205 MLECQ14165 292 aa16.13■□□□□ 0.17
CDRT4-203ENST00000524205 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
CDRT4-203ENST00000524205 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
CDRT4-203ENST00000524205 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
CDRT4-203ENST00000524205 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
CDRT4-203ENST00000524205 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
CDRT4-203ENST00000524205 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
CDRT4-203ENST00000524205 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
CDRT4-203ENST00000524205 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
CDRT4-203ENST00000524205 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
CDRT4-203ENST00000524205 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
CDRT4-203ENST00000524205 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
CDRT4-203ENST00000524205 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
CDRT4-203ENST00000524205 ATP10AO60312 1499 aa16.07■□□□□ 0.16
CDRT4-203ENST00000524205 MLH3Q9UHC1 1453 aa16.07■□□□□ 0.16
CDRT4-203ENST00000524205 ADGBQ8N7X0 1667 aa16.07■□□□□ 0.16
CDRT4-203ENST00000524205 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
CDRT4-203ENST00000524205 ITGAEP38570 1179 aa16.06■□□□□ 0.16
CDRT4-203ENST00000524205 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
CDRT4-203ENST00000524205 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
CDRT4-203ENST00000524205 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
CDRT4-203ENST00000524205 ABCC5O15440 1437 aa16.05■□□□□ 0.16
CDRT4-203ENST00000524205 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
CDRT4-203ENST00000524205 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms