RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 BCORL1Q5H9F3 1711 aa20.48■□□□□ 0.87
MCM4-216ENST00000524086 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
MCM4-216ENST00000524086 ATP10AO60312 1499 aa20.45■□□□□ 0.86
MCM4-216ENST00000524086 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
MCM4-216ENST00000524086 KIF14Q15058 1648 aa20.45■□□□□ 0.86
MCM4-216ENST00000524086 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
MCM4-216ENST00000524086 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
MCM4-216ENST00000524086 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
MCM4-216ENST00000524086 MLECQ14165 292 aa20.41■□□□□ 0.86
MCM4-216ENST00000524086 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
MCM4-216ENST00000524086 ARHGAP5Q13017 1502 aa20.41■□□□□ 0.86
MCM4-216ENST00000524086 MADDQ8WXG6 1647 aa20.41■□□□□ 0.86
MCM4-216ENST00000524086 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
MCM4-216ENST00000524086 MYO5CQ9NQX4 1742 aa20.4■□□□□ 0.86
MCM4-216ENST00000524086 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
MCM4-216ENST00000524086 FYCO1Q9BQS8 1478 aa20.35■□□□□ 0.85
MCM4-216ENST00000524086 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
MCM4-216ENST00000524086 LMTK3Q96Q04 1460 aa20.32■□□□□ 0.84
MCM4-216ENST00000524086 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
MCM4-216ENST00000524086 FBXO41Q8TF61 875 aa20.32■□□□□ 0.84
MCM4-216ENST00000524086 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
MCM4-216ENST00000524086 RIMS1Q86UR5 1692 aaKnown RBP20.31■□□□□ 0.84
MCM4-216ENST00000524086 KDM5CP41229 1560 aa20.3■□□□□ 0.84
MCM4-216ENST00000524086 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
MCM4-216ENST00000524086 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
MCM4-216ENST00000524086 HSPA2P54652 639 aa20.26■□□□□ 0.83
MCM4-216ENST00000524086 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
MCM4-216ENST00000524086 DMRT2Q9Y5R5 561 aa20.25■□□□□ 0.83
MCM4-216ENST00000524086 TRAPPC8Q9Y2L5 1435 aa20.25■□□□□ 0.83
MCM4-216ENST00000524086 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
MCM4-216ENST00000524086 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
MCM4-216ENST00000524086 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
MCM4-216ENST00000524086 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
MCM4-216ENST00000524086 PREX2Q70Z35 1606 aa20.23■□□□□ 0.83
MCM4-216ENST00000524086 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
MCM4-216ENST00000524086 KIAA1107Q9UPP5 1409 aa20.22■□□□□ 0.83
MCM4-216ENST00000524086 CEBPAP49715 358 aaPredicted RBP20.22■□□□□ 0.83
MCM4-216ENST00000524086 PLEKHH2Q8IVE3 1493 aa20.22■□□□□ 0.83
MCM4-216ENST00000524086 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
MCM4-216ENST00000524086 ABCC1P33527 1531 aa20.22■□□□□ 0.83
MCM4-216ENST00000524086 AGLP35573 1532 aa20.22■□□□□ 0.83
MCM4-216ENST00000524086 GPATCH8Q9UKJ3 1502 aaKnown RBP20.21■□□□□ 0.83
MCM4-216ENST00000524086 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
MCM4-216ENST00000524086 SIGLEC1Q9BZZ2 1709 aa20.2■□□□□ 0.82
MCM4-216ENST00000524086 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
MCM4-216ENST00000524086 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
MCM4-216ENST00000524086 CNTLNQ9NXG0 1405 aa20.19■□□□□ 0.82
MCM4-216ENST00000524086 UHRF1BP1Q6BDS2 1440 aa20.16■□□□□ 0.82
MCM4-216ENST00000524086 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
MCM4-216ENST00000524086 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
MCM4-216ENST00000524086 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
MCM4-216ENST00000524086 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
MCM4-216ENST00000524086 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
MCM4-216ENST00000524086 ABCA6Q8N139 1617 aa20.12■□□□□ 0.81
MCM4-216ENST00000524086 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
MCM4-216ENST00000524086 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
MCM4-216ENST00000524086 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
MCM4-216ENST00000524086 PREX1Q8TCU6 1659 aa20.09■□□□□ 0.81
MCM4-216ENST00000524086 KIDINS220Q9ULH0 1771 aa20.08■□□□□ 0.81
MCM4-216ENST00000524086 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
MCM4-216ENST00000524086 ZMYM3Q14202 1370 aa20.06■□□□□ 0.8
MCM4-216ENST00000524086 NPATQ14207 1427 aa20.05■□□□□ 0.8
MCM4-216ENST00000524086 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
MCM4-216ENST00000524086 A2MP01023 1474 aa20.05■□□□□ 0.8
MCM4-216ENST00000524086 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
MCM4-216ENST00000524086 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
MCM4-216ENST00000524086 GGT6Q6P531 493 aa20.03■□□□□ 0.8
MCM4-216ENST00000524086 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.79
MCM4-216ENST00000524086 PTPRTO14522 1441 aa20.01■□□□□ 0.79
MCM4-216ENST00000524086 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
MCM4-216ENST00000524086 TSPY4P0CV99 314 aa19.99■□□□□ 0.79
MCM4-216ENST00000524086 TSPY10P0CW01 314 aa19.99■□□□□ 0.79
MCM4-216ENST00000524086 DHX29Q7Z478 1369 aaKnown RBP19.98■□□□□ 0.79
MCM4-216ENST00000524086 C3P01024 1663 aa19.98■□□□□ 0.79
MCM4-216ENST00000524086 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
MCM4-216ENST00000524086 INO80Q9ULG1 1556 aaPredicted RBP19.96■□□□□ 0.79
MCM4-216ENST00000524086 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
MCM4-216ENST00000524086 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
MCM4-216ENST00000524086 PKD2Q13563 968 aa19.94■□□□□ 0.78
MCM4-216ENST00000524086 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
MCM4-216ENST00000524086 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
MCM4-216ENST00000524086 KIF3BO15066 747 aa19.92■□□□□ 0.78
MCM4-216ENST00000524086 SUPT6HQ7KZ85 1726 aaKnown RBP19.92■□□□□ 0.78
MCM4-216ENST00000524086 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
MCM4-216ENST00000524086 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
MCM4-216ENST00000524086 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
MCM4-216ENST00000524086 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
MCM4-216ENST00000524086 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
MCM4-216ENST00000524086 PTPRKQ15262 1439 aa19.89■□□□□ 0.77
MCM4-216ENST00000524086 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
MCM4-216ENST00000524086 APLP2Q06481 763 aa19.88■□□□□ 0.77
MCM4-216ENST00000524086 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
MCM4-216ENST00000524086 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
MCM4-216ENST00000524086 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
MCM4-216ENST00000524086 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
MCM4-216ENST00000524086 PLA2R1Q13018 1463 aa19.85■□□□□ 0.77
MCM4-216ENST00000524086 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
MCM4-216ENST00000524086 NCKAP5LQ9HCH0 1330 aa19.83■□□□□ 0.77
MCM4-216ENST00000524086 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.76
MCM4-216ENST00000524086 MIA2Q96PC5 1412 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms