RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 PLCH2O75038 1416 aa14.4□□□□□ -0.1
CTNNA1-240ENST00000523912 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
CTNNA1-240ENST00000523912 CCDC18Q5T9S5 1454 aa14.38□□□□□ -0.11
CTNNA1-240ENST00000523912 KIF14Q15058 1648 aa14.38□□□□□ -0.11
CTNNA1-240ENST00000523912 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
CTNNA1-240ENST00000523912 ZFYVE16Q7Z3T8 1539 aa14.37□□□□□ -0.11
CTNNA1-240ENST00000523912 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
CTNNA1-240ENST00000523912 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-240ENST00000523912 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
CTNNA1-240ENST00000523912 FYCO1Q9BQS8 1478 aa14.34□□□□□ -0.11
CTNNA1-240ENST00000523912 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.11
CTNNA1-240ENST00000523912 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
CTNNA1-240ENST00000523912 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
CTNNA1-240ENST00000523912 ATP10AO60312 1499 aa14.31□□□□□ -0.12
CTNNA1-240ENST00000523912 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
CTNNA1-240ENST00000523912 ZNF518AQ6AHZ1 1483 aa14.29□□□□□ -0.12
CTNNA1-240ENST00000523912 ARHGEF12Q9NZN5 1544 aa14.29□□□□□ -0.12
CTNNA1-240ENST00000523912 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.12
CTNNA1-240ENST00000523912 HSPA2P54652 639 aa14.27□□□□□ -0.13
CTNNA1-240ENST00000523912 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.13
CTNNA1-240ENST00000523912 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
CTNNA1-240ENST00000523912 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
CTNNA1-240ENST00000523912 SETD1BQ9UPS6 1966 aaKnown RBP14.24□□□□□ -0.13
CTNNA1-240ENST00000523912 MLECQ14165 292 aa14.24□□□□□ -0.13
CTNNA1-240ENST00000523912 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
CTNNA1-240ENST00000523912 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
CTNNA1-240ENST00000523912 KDM5CP41229 1560 aa14.23□□□□□ -0.13
CTNNA1-240ENST00000523912 REREQ9P2R6 1566 aa14.23□□□□□ -0.13
CTNNA1-240ENST00000523912 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
CTNNA1-240ENST00000523912 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.13
CTNNA1-240ENST00000523912 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
CTNNA1-240ENST00000523912 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
CTNNA1-240ENST00000523912 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
CTNNA1-240ENST00000523912 ABCC1P33527 1531 aa14.2□□□□□ -0.14
CTNNA1-240ENST00000523912 MLH3Q9UHC1 1453 aa14.2□□□□□ -0.14
CTNNA1-240ENST00000523912 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
CTNNA1-240ENST00000523912 AGLP35573 1532 aa14.19□□□□□ -0.14
CTNNA1-240ENST00000523912 UHRF1BP1Q6BDS2 1440 aa14.18□□□□□ -0.14
CTNNA1-240ENST00000523912 ZNF777Q9ULD5 760 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-240ENST00000523912 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
CTNNA1-240ENST00000523912 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
CTNNA1-240ENST00000523912 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
CTNNA1-240ENST00000523912 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
CTNNA1-240ENST00000523912 GPATCH8Q9UKJ3 1502 aaKnown RBP14.16□□□□□ -0.14
CTNNA1-240ENST00000523912 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
CTNNA1-240ENST00000523912 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
CTNNA1-240ENST00000523912 PTPRTO14522 1441 aa14.15□□□□□ -0.14
CTNNA1-240ENST00000523912 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
CTNNA1-240ENST00000523912 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
CTNNA1-240ENST00000523912 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
CTNNA1-240ENST00000523912 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
CTNNA1-240ENST00000523912 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
CTNNA1-240ENST00000523912 CDC42BPAQ5VT25 1732 aa14.13□□□□□ -0.15
CTNNA1-240ENST00000523912 SYCP2Q9BX26 1530 aa14.13□□□□□ -0.15
CTNNA1-240ENST00000523912 KIAA1107Q9UPP5 1409 aa14.13□□□□□ -0.15
CTNNA1-240ENST00000523912 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
CTNNA1-240ENST00000523912 STRCQ7RTU9 1775 aa14.12□□□□□ -0.15
CTNNA1-240ENST00000523912 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
CTNNA1-240ENST00000523912 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
CTNNA1-240ENST00000523912 IQSEC2Q5JU85 1478 aa14.09□□□□□ -0.15
CTNNA1-240ENST00000523912 NPATQ14207 1427 aa14.08□□□□□ -0.15
CTNNA1-240ENST00000523912 C3P01024 1663 aa14.08□□□□□ -0.16
CTNNA1-240ENST00000523912 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.167e-14■■■■■ 45.2
CTNNA1-240ENST00000523912 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
CTNNA1-240ENST00000523912 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
CTNNA1-240ENST00000523912 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
CTNNA1-240ENST00000523912 TIAM1Q13009 1591 aa14.06□□□□□ -0.16
CTNNA1-240ENST00000523912 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
CTNNA1-240ENST00000523912 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
CTNNA1-240ENST00000523912 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
CTNNA1-240ENST00000523912 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
CTNNA1-240ENST00000523912 A2MP01023 1474 aa14.03□□□□□ -0.16
CTNNA1-240ENST00000523912 INO80Q9ULG1 1556 aaPredicted RBP14.03□□□□□ -0.16
CTNNA1-240ENST00000523912 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-240ENST00000523912 LTBP4Q8N2S1 1624 aa14.02□□□□□ -0.16
CTNNA1-240ENST00000523912 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
CTNNA1-240ENST00000523912 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
CTNNA1-240ENST00000523912 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
CTNNA1-240ENST00000523912 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
CTNNA1-240ENST00000523912 PLXNC1O60486 1568 aa14□□□□□ -0.17
CTNNA1-240ENST00000523912 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 PKD2Q13563 968 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
CTNNA1-240ENST00000523912 SOCS7O14512 581 aa13.97□□□□□ -0.17
CTNNA1-240ENST00000523912 APLP2Q06481 763 aa13.97□□□□□ -0.17
CTNNA1-240ENST00000523912 CAMSAP1Q5T5Y3 1602 aa13.97□□□□□ -0.17
CTNNA1-240ENST00000523912 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
CTNNA1-240ENST00000523912 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
CTNNA1-240ENST00000523912 GGT6Q6P531 493 aa13.96□□□□□ -0.17
CTNNA1-240ENST00000523912 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
CTNNA1-240ENST00000523912 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
CTNNA1-240ENST00000523912 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
CTNNA1-240ENST00000523912 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-240ENST00000523912 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-240ENST00000523912 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms