RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 ZCCHC11Q5TAX3 1644 aaKnown RBP14.25□□□□□ -0.13
PTK2-248ENST00000523675 EEA1Q15075 1411 aa14.24□□□□□ -0.13
PTK2-248ENST00000523675 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
PTK2-248ENST00000523675 ABCA8O94911 1581 aa14.22□□□□□ -0.13
PTK2-248ENST00000523675 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
PTK2-248ENST00000523675 PPRC1Q5VV67 1664 aaKnown RBP14.22□□□□□ -0.13
PTK2-248ENST00000523675 WDR7Q9Y4E6 1490 aa14.21□□□□□ -0.13
PTK2-248ENST00000523675 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
PTK2-248ENST00000523675 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
PTK2-248ENST00000523675 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
PTK2-248ENST00000523675 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
PTK2-248ENST00000523675 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
PTK2-248ENST00000523675 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
PTK2-248ENST00000523675 EVX2Q03828 476 aa14.14□□□□□ -0.15
PTK2-248ENST00000523675 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
PTK2-248ENST00000523675 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
PTK2-248ENST00000523675 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
PTK2-248ENST00000523675 KCNH8Q96L42 1107 aa14.1□□□□□ -0.15
PTK2-248ENST00000523675 ATP10BO94823 1461 aa14.1□□□□□ -0.15
PTK2-248ENST00000523675 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
PTK2-248ENST00000523675 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
PTK2-248ENST00000523675 KIF21BO75037 1637 aa14.06□□□□□ -0.16
PTK2-248ENST00000523675 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
PTK2-248ENST00000523675 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
PTK2-248ENST00000523675 ARAP3Q8WWN8 1544 aa14.05□□□□□ -0.16
PTK2-248ENST00000523675 EFCAB5A4FU69 1503 aa14.04□□□□□ -0.16
PTK2-248ENST00000523675 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
PTK2-248ENST00000523675 ADGRL1O94910 1474 aa14.02□□□□□ -0.16
PTK2-248ENST00000523675 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
PTK2-248ENST00000523675 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
PTK2-248ENST00000523675 NEO1Q92859 1461 aa13.99□□□□□ -0.17
PTK2-248ENST00000523675 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
PTK2-248ENST00000523675 ARID3CA6NKF2 412 aa13.98□□□□□ -0.17
PTK2-248ENST00000523675 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
PTK2-248ENST00000523675 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.17
PTK2-248ENST00000523675 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
PTK2-248ENST00000523675 UBTFP17480 764 aaKnown RBP13.93□□□□□ -0.18
PTK2-248ENST00000523675 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
PTK2-248ENST00000523675 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
PTK2-248ENST00000523675 PROM2Q8N271 834 aa13.9□□□□□ -0.18
PTK2-248ENST00000523675 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
PTK2-248ENST00000523675 RAPGEF3O95398 923 aa13.88□□□□□ -0.19
PTK2-248ENST00000523675 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
PTK2-248ENST00000523675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTK2-248ENST00000523675 FANCAO15360 1455 aa13.87□□□□□ -0.19
PTK2-248ENST00000523675 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
PTK2-248ENST00000523675 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
PTK2-248ENST00000523675 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
PTK2-248ENST00000523675 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
PTK2-248ENST00000523675 FRMPD1Q5SYB0 1578 aa13.83□□□□□ -0.19
PTK2-248ENST00000523675 PLCH2O75038 1416 aa13.83□□□□□ -0.2
PTK2-248ENST00000523675 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
PTK2-248ENST00000523675 RICTORQ6R327 1708 aa13.83□□□□□ -0.2
PTK2-248ENST00000523675 ADAMTSL3P82987 1691 aa13.82□□□□□ -0.2
PTK2-248ENST00000523675 MAGI2Q86UL8 1455 aa13.82□□□□□ -0.2
PTK2-248ENST00000523675 CDK13Q14004 1512 aaKnown RBP13.82□□□□□ -0.2
PTK2-248ENST00000523675 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
PTK2-248ENST00000523675 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
PTK2-248ENST00000523675 HECW2Q9P2P5 1572 aa13.81□□□□□ -0.2
PTK2-248ENST00000523675 GABBR2O75899 941 aa13.8□□□□□ -0.2
PTK2-248ENST00000523675 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
PTK2-248ENST00000523675 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
PTK2-248ENST00000523675 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
PTK2-248ENST00000523675 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
PTK2-248ENST00000523675 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
PTK2-248ENST00000523675 PTPRMP28827 1452 aa13.78□□□□□ -0.2
PTK2-248ENST00000523675 CLIP1P30622 1438 aa13.77□□□□□ -0.21
PTK2-248ENST00000523675 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
PTK2-248ENST00000523675 POGZQ7Z3K3 1410 aa13.76□□□□□ -0.21
PTK2-248ENST00000523675 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
PTK2-248ENST00000523675 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
PTK2-248ENST00000523675 KIF14Q15058 1648 aa13.75□□□□□ -0.21
PTK2-248ENST00000523675 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
PTK2-248ENST00000523675 ZFYVE16Q7Z3T8 1539 aa13.74□□□□□ -0.21
PTK2-248ENST00000523675 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
PTK2-248ENST00000523675 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
PTK2-248ENST00000523675 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
PTK2-248ENST00000523675 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.21
PTK2-248ENST00000523675 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.21
PTK2-248ENST00000523675 ATP10AO60312 1499 aa13.7□□□□□ -0.22
PTK2-248ENST00000523675 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
PTK2-248ENST00000523675 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
PTK2-248ENST00000523675 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
PTK2-248ENST00000523675 PCF11O94913 1555 aaKnown RBP13.67□□□□□ -0.22
PTK2-248ENST00000523675 KDM5CP41229 1560 aa13.67□□□□□ -0.22
PTK2-248ENST00000523675 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
PTK2-248ENST00000523675 CDC42BPBQ9Y5S2 1711 aa13.66□□□□□ -0.22
PTK2-248ENST00000523675 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
PTK2-248ENST00000523675 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
PTK2-248ENST00000523675 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
PTK2-248ENST00000523675 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
PTK2-248ENST00000523675 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
PTK2-248ENST00000523675 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
PTK2-248ENST00000523675 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
PTK2-248ENST00000523675 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
PTK2-248ENST00000523675 SIGLEC1Q9BZZ2 1709 aa13.64□□□□□ -0.23
PTK2-248ENST00000523675 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
PTK2-248ENST00000523675 CLCN6P51797 869 aa13.63□□□□□ -0.23
PTK2-248ENST00000523675 ARHGEF12Q9NZN5 1544 aa13.63□□□□□ -0.23
PTK2-248ENST00000523675 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms