RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
FAM49B-227ENST00000523514 PPRC1Q5VV67 1664 aaKnown RBP12.43□□□□□ -0.42
FAM49B-227ENST00000523514 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
FAM49B-227ENST00000523514 ABCA9Q8IUA7 1624 aa12.42□□□□□ -0.42
FAM49B-227ENST00000523514 DSG3P32926 999 aa12.42□□□□□ -0.42
FAM49B-227ENST00000523514 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
FAM49B-227ENST00000523514 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
FAM49B-227ENST00000523514 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
FAM49B-227ENST00000523514 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
FAM49B-227ENST00000523514 CDK11AQ9UQ88 783 aaPredicted RBP12.4□□□□□ -0.42
FAM49B-227ENST00000523514 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.42
FAM49B-227ENST00000523514 KDM6BO15054 1643 aa12.4□□□□□ -0.42
FAM49B-227ENST00000523514 LRRIQ1Q96JM4 1722 aa12.4□□□□□ -0.43
FAM49B-227ENST00000523514 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
FAM49B-227ENST00000523514 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
FAM49B-227ENST00000523514 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
FAM49B-227ENST00000523514 KIF14Q15058 1648 aa12.36□□□□□ -0.43
FAM49B-227ENST00000523514 TROQ12816 1431 aaPredicted RBP12.35□□□□□ -0.43
FAM49B-227ENST00000523514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 22.1
FAM49B-227ENST00000523514 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
FAM49B-227ENST00000523514 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
FAM49B-227ENST00000523514 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
FAM49B-227ENST00000523514 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
FAM49B-227ENST00000523514 NEO1Q92859 1461 aa12.32□□□□□ -0.44
FAM49B-227ENST00000523514 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
FAM49B-227ENST00000523514 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
FAM49B-227ENST00000523514 FKBP8Q14318 412 aa12.29□□□□□ -0.44
FAM49B-227ENST00000523514 ABCB7O75027 752 aa12.28□□□□□ -0.44
FAM49B-227ENST00000523514 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.44
FAM49B-227ENST00000523514 PLCH2O75038 1416 aa12.27□□□□□ -0.45
FAM49B-227ENST00000523514 FANCAO15360 1455 aa12.27□□□□□ -0.45
FAM49B-227ENST00000523514 MTUS2Q5JR59 1369 aa12.26□□□□□ -0.45
FAM49B-227ENST00000523514 COL17A1Q9UMD9 1497 aaPredicted RBP12.25□□□□□ -0.45
FAM49B-227ENST00000523514 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
FAM49B-227ENST00000523514 PREX2Q70Z35 1606 aa12.25□□□□□ -0.45
FAM49B-227ENST00000523514 MAP3K1Q13233 1512 aa12.24□□□□□ -0.45
FAM49B-227ENST00000523514 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
FAM49B-227ENST00000523514 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
FAM49B-227ENST00000523514 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
FAM49B-227ENST00000523514 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
FAM49B-227ENST00000523514 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.45
FAM49B-227ENST00000523514 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
FAM49B-227ENST00000523514 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.45
FAM49B-227ENST00000523514 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
FAM49B-227ENST00000523514 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
FAM49B-227ENST00000523514 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
FAM49B-227ENST00000523514 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
FAM49B-227ENST00000523514 FRMPD1Q5SYB0 1578 aa12.19□□□□□ -0.46
FAM49B-227ENST00000523514 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
FAM49B-227ENST00000523514 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
FAM49B-227ENST00000523514 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
FAM49B-227ENST00000523514 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
FAM49B-227ENST00000523514 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
FAM49B-227ENST00000523514 POLA2Q14181 598 aa12.17□□□□□ -0.46
FAM49B-227ENST00000523514 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
FAM49B-227ENST00000523514 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
FAM49B-227ENST00000523514 ABCC1P33527 1531 aa12.16□□□□□ -0.46
FAM49B-227ENST00000523514 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
FAM49B-227ENST00000523514 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
FAM49B-227ENST00000523514 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
FAM49B-227ENST00000523514 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
FAM49B-227ENST00000523514 ARHGEF40Q8TER5 1519 aa12.15□□□□□ -0.46
FAM49B-227ENST00000523514 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
FAM49B-227ENST00000523514 KDM5CP41229 1560 aa12.13□□□□□ -0.47
FAM49B-227ENST00000523514 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
FAM49B-227ENST00000523514 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
FAM49B-227ENST00000523514 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
FAM49B-227ENST00000523514 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
FAM49B-227ENST00000523514 HECW2Q9P2P5 1572 aa12.11□□□□□ -0.47
FAM49B-227ENST00000523514 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
FAM49B-227ENST00000523514 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
FAM49B-227ENST00000523514 ZNF777Q9ULD5 760 aaPredicted RBP12.09□□□□□ -0.47
FAM49B-227ENST00000523514 ARHGEF12Q9NZN5 1544 aa12.09□□□□□ -0.47
FAM49B-227ENST00000523514 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
FAM49B-227ENST00000523514 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.48
FAM49B-227ENST00000523514 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
FAM49B-227ENST00000523514 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
FAM49B-227ENST00000523514 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
FAM49B-227ENST00000523514 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
FAM49B-227ENST00000523514 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
FAM49B-227ENST00000523514 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
FAM49B-227ENST00000523514 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
FAM49B-227ENST00000523514 AFAP1Q8N556 730 aa12.05□□□□□ -0.48
FAM49B-227ENST00000523514 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
FAM49B-227ENST00000523514 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
FAM49B-227ENST00000523514 ATP10AO60312 1499 aa12.04□□□□□ -0.48
FAM49B-227ENST00000523514 KIDINS220Q9ULH0 1771 aa12.04□□□□□ -0.48
FAM49B-227ENST00000523514 ARHGEF5Q12774 1597 aa12.04□□□□□ -0.48
FAM49B-227ENST00000523514 INO80Q9ULG1 1556 aaPredicted RBP12.04□□□□□ -0.48
FAM49B-227ENST00000523514 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
FAM49B-227ENST00000523514 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
FAM49B-227ENST00000523514 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.49
FAM49B-227ENST00000523514 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
FAM49B-227ENST00000523514 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
FAM49B-227ENST00000523514 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms