RNA–Protein interactions for RNA: ENST00000523465.1

POLB-214, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-214ENST00000523465 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
POLB-214ENST00000523465 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
POLB-214ENST00000523465 SEC24BO95487 1268 aa13.36□□□□□ -0.27
POLB-214ENST00000523465 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
POLB-214ENST00000523465 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
POLB-214ENST00000523465 PDE4AP27815 886 aa13.35□□□□□ -0.27
POLB-214ENST00000523465 C7P10643 843 aa13.34□□□□□ -0.27
POLB-214ENST00000523465 G3V3G9 751 aa13.33□□□□□ -0.28
POLB-214ENST00000523465 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
POLB-214ENST00000523465 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
POLB-214ENST00000523465 BOLA1Q9Y3E2 137 aa13.31□□□□□ -0.28
POLB-214ENST00000523465 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
POLB-214ENST00000523465 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
POLB-214ENST00000523465 NBR1Q14596 966 aa13.29□□□□□ -0.28
POLB-214ENST00000523465 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
POLB-214ENST00000523465 CRISPLD2Q9H0B8 497 aa13.29□□□□□ -0.28
POLB-214ENST00000523465 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
POLB-214ENST00000523465 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
POLB-214ENST00000523465 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
POLB-214ENST00000523465 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
POLB-214ENST00000523465 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
POLB-214ENST00000523465 CUX2O14529 1486 aa13.24□□□□□ -0.29
POLB-214ENST00000523465 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
POLB-214ENST00000523465 MFSD10Q14728 455 aa13.24□□□□□ -0.29
POLB-214ENST00000523465 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
POLB-214ENST00000523465 E2F4Q16254 413 aa13.23□□□□□ -0.29
POLB-214ENST00000523465 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
POLB-214ENST00000523465 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
POLB-214ENST00000523465 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
POLB-214ENST00000523465 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
POLB-214ENST00000523465 NESP48681 1621 aa13.2□□□□□ -0.3
POLB-214ENST00000523465 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
POLB-214ENST00000523465 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
POLB-214ENST00000523465 HMGXB3Q12766 1538 aa13.17□□□□□ -0.3
POLB-214ENST00000523465 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
POLB-214ENST00000523465 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
POLB-214ENST00000523465 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
POLB-214ENST00000523465 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
POLB-214ENST00000523465 FOXK1P85037 733 aa13.11□□□□□ -0.31
POLB-214ENST00000523465 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
POLB-214ENST00000523465 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
POLB-214ENST00000523465 C2orf72A6NCS6 295 aa13.1□□□□□ -0.31
POLB-214ENST00000523465 DSG2Q14126 1118 aa13.1□□□□□ -0.31
POLB-214ENST00000523465 KIF3CO14782 793 aa13.09□□□□□ -0.31
POLB-214ENST00000523465 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
POLB-214ENST00000523465 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
POLB-214ENST00000523465 PLPP6Q8IY26 295 aa13.05□□□□□ -0.32
POLB-214ENST00000523465 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
POLB-214ENST00000523465 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
POLB-214ENST00000523465 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
POLB-214ENST00000523465 TMEM92Q6UXU6 159 aa13.03□□□□□ -0.32
POLB-214ENST00000523465 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
POLB-214ENST00000523465 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
POLB-214ENST00000523465 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.33
POLB-214ENST00000523465 TULP1O00294 542 aaPredicted RBP12.98□□□□□ -0.33
POLB-214ENST00000523465 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
POLB-214ENST00000523465 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
POLB-214ENST00000523465 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
POLB-214ENST00000523465 DPYSL4O14531 572 aa12.93□□□□□ -0.34
POLB-214ENST00000523465 SEMA3EO15041 775 aa12.93□□□□□ -0.34
POLB-214ENST00000523465 WIZO95785 1651 aa12.93□□□□□ -0.34
POLB-214ENST00000523465 SPDYE16A6NNV3 312 aaPredicted RBP12.92□□□□□ -0.34
POLB-214ENST00000523465 TPRNQ4KMQ1 711 aa12.92□□□□□ -0.34
POLB-214ENST00000523465 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
POLB-214ENST00000523465 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
POLB-214ENST00000523465 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
POLB-214ENST00000523465 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
POLB-214ENST00000523465 PDIA6Q15084 440 aa12.88□□□□□ -0.35
POLB-214ENST00000523465 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
POLB-214ENST00000523465 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
POLB-214ENST00000523465 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
POLB-214ENST00000523465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
POLB-214ENST00000523465 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
POLB-214ENST00000523465 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
POLB-214ENST00000523465 TBC1D12O60347 775 aa12.86□□□□□ -0.35
POLB-214ENST00000523465 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
POLB-214ENST00000523465 SLC34A2O95436 690 aa12.85□□□□□ -0.35
POLB-214ENST00000523465 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
POLB-214ENST00000523465 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
POLB-214ENST00000523465 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
POLB-214ENST00000523465 WDR62O43379 1518 aa12.82□□□□□ -0.36
POLB-214ENST00000523465 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
POLB-214ENST00000523465 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
POLB-214ENST00000523465 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
POLB-214ENST00000523465 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
POLB-214ENST00000523465 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
POLB-214ENST00000523465 EVI5O60447 810 aa12.76□□□□□ -0.37
POLB-214ENST00000523465 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
POLB-214ENST00000523465 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
POLB-214ENST00000523465 PTGER2P43116 358 aa12.72□□□□□ -0.37
POLB-214ENST00000523465 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
POLB-214ENST00000523465 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
POLB-214ENST00000523465 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
POLB-214ENST00000523465 CFTRP13569 1480 aa12.7□□□□□ -0.38
POLB-214ENST00000523465 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
POLB-214ENST00000523465 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
POLB-214ENST00000523465 SNPHO15079 494 aa12.68□□□□□ -0.38
POLB-214ENST00000523465 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
POLB-214ENST00000523465 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
POLB-214ENST00000523465 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms