RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 POGZQ7Z3K3 1410 aa19.11■□□□□ 0.65
CTNNA1-237ENST00000523275 KIF14Q15058 1648 aa19.11■□□□□ 0.65
CTNNA1-237ENST00000523275 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
CTNNA1-237ENST00000523275 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.65
CTNNA1-237ENST00000523275 CCDC18Q5T9S5 1454 aa19.08■□□□□ 0.64
CTNNA1-237ENST00000523275 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
CTNNA1-237ENST00000523275 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
CTNNA1-237ENST00000523275 MADDQ8WXG6 1647 aa19.07■□□□□ 0.64
CTNNA1-237ENST00000523275 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
CTNNA1-237ENST00000523275 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
CTNNA1-237ENST00000523275 MLECQ14165 292 aa19.05■□□□□ 0.64
CTNNA1-237ENST00000523275 ATP10AO60312 1499 aa19.04■□□□□ 0.64
CTNNA1-237ENST00000523275 ILDR1Q86SU0 546 aaPredicted RBP19.03■□□□□ 0.64
CTNNA1-237ENST00000523275 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
CTNNA1-237ENST00000523275 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
CTNNA1-237ENST00000523275 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
CTNNA1-237ENST00000523275 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
CTNNA1-237ENST00000523275 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
CTNNA1-237ENST00000523275 RIMS1Q86UR5 1692 aaKnown RBP18.99■□□□□ 0.63
CTNNA1-237ENST00000523275 SIGLEC1Q9BZZ2 1709 aa18.99■□□□□ 0.63
CTNNA1-237ENST00000523275 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
CTNNA1-237ENST00000523275 KDM5CP41229 1560 aa18.96■□□□□ 0.63
CTNNA1-237ENST00000523275 PREX2Q70Z35 1606 aa18.95■□□□□ 0.62
CTNNA1-237ENST00000523275 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
CTNNA1-237ENST00000523275 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
CTNNA1-237ENST00000523275 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
CTNNA1-237ENST00000523275 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
CTNNA1-237ENST00000523275 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
CTNNA1-237ENST00000523275 ABCC1P33527 1531 aa18.91■□□□□ 0.62
CTNNA1-237ENST00000523275 GPATCH8Q9UKJ3 1502 aaKnown RBP18.9■□□□□ 0.62
CTNNA1-237ENST00000523275 HSPA2P54652 639 aa18.9■□□□□ 0.62
CTNNA1-237ENST00000523275 CFDP1Q9UEE9 299 aaPredicted RBP18.89■□□□□ 0.61
CTNNA1-237ENST00000523275 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
CTNNA1-237ENST00000523275 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
CTNNA1-237ENST00000523275 FER1L4A9Z1Z3 1794 aa18.88■□□□□ 0.61
CTNNA1-237ENST00000523275 CEBPAP49715 358 aaPredicted RBP18.88■□□□□ 0.61
CTNNA1-237ENST00000523275 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
CTNNA1-237ENST00000523275 HNRNPMP52272 730 aaKnown RBP eCLIP18.87■□□□□ 0.613e-6■■■■□ 24.9
CTNNA1-237ENST00000523275 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
CTNNA1-237ENST00000523275 REREQ9P2R6 1566 aa18.86■□□□□ 0.61
CTNNA1-237ENST00000523275 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
CTNNA1-237ENST00000523275 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
CTNNA1-237ENST00000523275 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
CTNNA1-237ENST00000523275 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
CTNNA1-237ENST00000523275 ABCA6Q8N139 1617 aa18.84■□□□□ 0.61
CTNNA1-237ENST00000523275 AGLP35573 1532 aa18.83■□□□□ 0.6
CTNNA1-237ENST00000523275 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
CTNNA1-237ENST00000523275 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
CTNNA1-237ENST00000523275 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
CTNNA1-237ENST00000523275 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
CTNNA1-237ENST00000523275 SYCP2Q9BX26 1530 aa18.8■□□□□ 0.6
CTNNA1-237ENST00000523275 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
CTNNA1-237ENST00000523275 LOC105371045A0A1W2PR82 267 aa18.77■□□□□ 0.6
CTNNA1-237ENST00000523275 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
CTNNA1-237ENST00000523275 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
CTNNA1-237ENST00000523275 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
CTNNA1-237ENST00000523275 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
CTNNA1-237ENST00000523275 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
CTNNA1-237ENST00000523275 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
CTNNA1-237ENST00000523275 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
CTNNA1-237ENST00000523275 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
CTNNA1-237ENST00000523275 DMRT2Q9Y5R5 561 aa18.7■□□□□ 0.58
CTNNA1-237ENST00000523275 A2MP01023 1474 aa18.7■□□□□ 0.58
CTNNA1-237ENST00000523275 MBD5Q9P267 1494 aa18.7■□□□□ 0.58
CTNNA1-237ENST00000523275 C3P01024 1663 aa18.69■□□□□ 0.58
CTNNA1-237ENST00000523275 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
CTNNA1-237ENST00000523275 INO80Q9ULG1 1556 aaPredicted RBP18.68■□□□□ 0.58
CTNNA1-237ENST00000523275 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
CTNNA1-237ENST00000523275 GGT6Q6P531 493 aa18.67■□□□□ 0.58
CTNNA1-237ENST00000523275 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
CTNNA1-237ENST00000523275 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
CTNNA1-237ENST00000523275 PPP6R1Q9UPN7 881 aa18.66■□□□□ 0.58
CTNNA1-237ENST00000523275 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
CTNNA1-237ENST00000523275 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
CTNNA1-237ENST00000523275 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
CTNNA1-237ENST00000523275 PLXNC1O60486 1568 aa18.64■□□□□ 0.58
CTNNA1-237ENST00000523275 NPATQ14207 1427 aa18.64■□□□□ 0.57
CTNNA1-237ENST00000523275 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
CTNNA1-237ENST00000523275 MROH2AA6NES4 1674 aa18.6■□□□□ 0.57
CTNNA1-237ENST00000523275 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
CTNNA1-237ENST00000523275 CAMSAP2Q08AD1 1489 aa18.6■□□□□ 0.57
CTNNA1-237ENST00000523275 LRRC9Q6ZRR7 1453 aa18.6■□□□□ 0.57
CTNNA1-237ENST00000523275 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CTNNA1-237ENST00000523275 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
CTNNA1-237ENST00000523275 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
CTNNA1-237ENST00000523275 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
CTNNA1-237ENST00000523275 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
CTNNA1-237ENST00000523275 PTPRTO14522 1441 aa18.57■□□□□ 0.56
CTNNA1-237ENST00000523275 KIF3BO15066 747 aa18.57■□□□□ 0.56
CTNNA1-237ENST00000523275 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
CTNNA1-237ENST00000523275 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
CTNNA1-237ENST00000523275 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
CTNNA1-237ENST00000523275 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
CTNNA1-237ENST00000523275 ARHGEF5Q12774 1597 aa18.53■□□□□ 0.56
CTNNA1-237ENST00000523275 WASHC2CQ9Y4E1 1318 aa18.5■□□□□ 0.55
CTNNA1-237ENST00000523275 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
CTNNA1-237ENST00000523275 APLP2Q06481 763 aa18.5■□□□□ 0.55
CTNNA1-237ENST00000523275 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
CTNNA1-237ENST00000523275 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
CTNNA1-237ENST00000523275 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms