RNA–Protein interactions for RNA: ENST00000523268.6

LETM2-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 1 (best)

Gene LETM2, Length 2,745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-206ENST00000523268 PTPRTO14522 1441 aa16.69■□□□□ 0.26
LETM2-206ENST00000523268 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
LETM2-206ENST00000523268 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
LETM2-206ENST00000523268 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
LETM2-206ENST00000523268 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
LETM2-206ENST00000523268 KIF14Q15058 1648 aa16.67■□□□□ 0.26
LETM2-206ENST00000523268 SETD1BQ9UPS6 1966 aaKnown RBP16.67■□□□□ 0.26
LETM2-206ENST00000523268 FAM135AQ9P2D6 1515 aa16.67■□□□□ 0.26
LETM2-206ENST00000523268 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
LETM2-206ENST00000523268 CLIP1P30622 1438 aa16.65■□□□□ 0.26
LETM2-206ENST00000523268 MLH3Q9UHC1 1453 aa16.65■□□□□ 0.26
LETM2-206ENST00000523268 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
LETM2-206ENST00000523268 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
LETM2-206ENST00000523268 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
LETM2-206ENST00000523268 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
LETM2-206ENST00000523268 NPATQ14207 1427 aa16.59■□□□□ 0.25
LETM2-206ENST00000523268 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
LETM2-206ENST00000523268 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
LETM2-206ENST00000523268 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
LETM2-206ENST00000523268 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
LETM2-206ENST00000523268 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
LETM2-206ENST00000523268 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
LETM2-206ENST00000523268 UHRF1BP1Q6BDS2 1440 aa16.54■□□□□ 0.24
LETM2-206ENST00000523268 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
LETM2-206ENST00000523268 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
LETM2-206ENST00000523268 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
LETM2-206ENST00000523268 ABCC1P33527 1531 aa16.52■□□□□ 0.23
LETM2-206ENST00000523268 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
LETM2-206ENST00000523268 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
LETM2-206ENST00000523268 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
LETM2-206ENST00000523268 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
LETM2-206ENST00000523268 STRCQ7RTU9 1775 aa16.48■□□□□ 0.23
LETM2-206ENST00000523268 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
LETM2-206ENST00000523268 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
LETM2-206ENST00000523268 ARHGAP5Q13017 1502 aa16.47■□□□□ 0.23
LETM2-206ENST00000523268 C3P01024 1663 aa16.47■□□□□ 0.23
LETM2-206ENST00000523268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
LETM2-206ENST00000523268 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
LETM2-206ENST00000523268 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
LETM2-206ENST00000523268 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
LETM2-206ENST00000523268 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
LETM2-206ENST00000523268 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
LETM2-206ENST00000523268 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
LETM2-206ENST00000523268 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
LETM2-206ENST00000523268 NCOA1Q15788 1441 aa16.41■□□□□ 0.22
LETM2-206ENST00000523268 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
LETM2-206ENST00000523268 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
LETM2-206ENST00000523268 LTBP4Q8N2S1 1624 aa16.4■□□□□ 0.22
LETM2-206ENST00000523268 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
LETM2-206ENST00000523268 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
LETM2-206ENST00000523268 INO80Q9ULG1 1556 aaPredicted RBP16.38■□□□□ 0.21
LETM2-206ENST00000523268 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
LETM2-206ENST00000523268 SAMD9LQ8IVG5 1584 aa16.36■□□□□ 0.21
LETM2-206ENST00000523268 PKD2Q13563 968 aa16.36■□□□□ 0.21
LETM2-206ENST00000523268 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
LETM2-206ENST00000523268 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
LETM2-206ENST00000523268 CPS1P31327 1500 aa16.32■□□□□ 0.2
LETM2-206ENST00000523268 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
LETM2-206ENST00000523268 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
LETM2-206ENST00000523268 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
LETM2-206ENST00000523268 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
LETM2-206ENST00000523268 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
LETM2-206ENST00000523268 SOCS7O14512 581 aa16.27■□□□□ 0.2
LETM2-206ENST00000523268 A2ML1A8K2U0 1454 aa16.27■□□□□ 0.19
LETM2-206ENST00000523268 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
LETM2-206ENST00000523268 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
LETM2-206ENST00000523268 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
LETM2-206ENST00000523268 A2MP01023 1474 aa16.25■□□□□ 0.19
LETM2-206ENST00000523268 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
LETM2-206ENST00000523268 CAMSAP1Q5T5Y3 1602 aa16.25■□□□□ 0.19
LETM2-206ENST00000523268 POLR1AO95602 1720 aaPredicted RBP16.24■□□□□ 0.19
LETM2-206ENST00000523268 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
LETM2-206ENST00000523268 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
LETM2-206ENST00000523268 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
LETM2-206ENST00000523268 NLRP1Q9C000 1473 aa16.21■□□□□ 0.19
LETM2-206ENST00000523268 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
LETM2-206ENST00000523268 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.19
LETM2-206ENST00000523268 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
LETM2-206ENST00000523268 HSPA2P54652 639 aa16.2■□□□□ 0.18
LETM2-206ENST00000523268 CLTCQ00610 1675 aaKnown RBP16.2■□□□□ 0.18
LETM2-206ENST00000523268 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
LETM2-206ENST00000523268 SYNMO15061 1565 aa16.2■□□□□ 0.18
LETM2-206ENST00000523268 MAST1Q9Y2H9 1570 aa16.2■□□□□ 0.18
LETM2-206ENST00000523268 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
LETM2-206ENST00000523268 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
LETM2-206ENST00000523268 MED14O60244 1454 aa16.19■□□□□ 0.18
LETM2-206ENST00000523268 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
LETM2-206ENST00000523268 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
LETM2-206ENST00000523268 PZPP20742 1482 aa16.17■□□□□ 0.18
LETM2-206ENST00000523268 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
LETM2-206ENST00000523268 RNF17Q9BXT8 1623 aaKnown RBP16.16■□□□□ 0.18
LETM2-206ENST00000523268 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
LETM2-206ENST00000523268 KDM5AP29375 1690 aaKnown RBP16.15■□□□□ 0.18
LETM2-206ENST00000523268 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
LETM2-206ENST00000523268 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
LETM2-206ENST00000523268 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
LETM2-206ENST00000523268 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
LETM2-206ENST00000523268 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
LETM2-206ENST00000523268 MLECQ14165 292 aa16.12■□□□□ 0.17
LETM2-206ENST00000523268 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms