RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
CSGALNACT1-211ENST00000522854 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
CSGALNACT1-211ENST00000522854 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
CSGALNACT1-211ENST00000522854 MYO5CQ9NQX4 1742 aa22.58■■□□□ 1.21
CSGALNACT1-211ENST00000522854 HRCP23327 699 aa22.57■■□□□ 1.2
CSGALNACT1-211ENST00000522854 ARHGAP5Q13017 1502 aa22.56■■□□□ 1.2
CSGALNACT1-211ENST00000522854 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
CSGALNACT1-211ENST00000522854 SAMD9LQ8IVG5 1584 aa22.54■■□□□ 1.2
CSGALNACT1-211ENST00000522854 ABCC5O15440 1437 aa22.54■■□□□ 1.2
CSGALNACT1-211ENST00000522854 DAPK1P53355 1430 aa22.54■■□□□ 1.2
CSGALNACT1-211ENST00000522854 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
CSGALNACT1-211ENST00000522854 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
CSGALNACT1-211ENST00000522854 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.2
CSGALNACT1-211ENST00000522854 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
CSGALNACT1-211ENST00000522854 PLCH2O75038 1416 aa22.49■■□□□ 1.19
CSGALNACT1-211ENST00000522854 ABCA9Q8IUA7 1624 aa22.48■■□□□ 1.19
CSGALNACT1-211ENST00000522854 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
CSGALNACT1-211ENST00000522854 NAIPQ13075 1403 aa22.46■■□□□ 1.19
CSGALNACT1-211ENST00000522854 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
CSGALNACT1-211ENST00000522854 CROCC2H7BZ55 1655 aa22.45■■□□□ 1.18
CSGALNACT1-211ENST00000522854 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
CSGALNACT1-211ENST00000522854 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
CSGALNACT1-211ENST00000522854 ARHGEF12Q9NZN5 1544 aa22.43■■□□□ 1.18
CSGALNACT1-211ENST00000522854 KDM6BO15054 1643 aa22.42■■□□□ 1.18
CSGALNACT1-211ENST00000522854 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
CSGALNACT1-211ENST00000522854 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
CSGALNACT1-211ENST00000522854 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
CSGALNACT1-211ENST00000522854 GCC2Q8IWJ2 1684 aa22.38■■□□□ 1.17
CSGALNACT1-211ENST00000522854 FANCAO15360 1455 aa22.38■■□□□ 1.17
CSGALNACT1-211ENST00000522854 ARHGEF5Q12774 1597 aa22.37■■□□□ 1.17
CSGALNACT1-211ENST00000522854 C9orf84Q5VXU9 1444 aa22.36■■□□□ 1.17
CSGALNACT1-211ENST00000522854 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CSGALNACT1-211ENST00000522854 ADGBQ8N7X0 1667 aa22.36■■□□□ 1.17
CSGALNACT1-211ENST00000522854 ABCC1P33527 1531 aa22.36■■□□□ 1.17
CSGALNACT1-211ENST00000522854 CCDC141Q6ZP82 1450 aa22.35■■□□□ 1.17
CSGALNACT1-211ENST00000522854 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
CSGALNACT1-211ENST00000522854 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
CSGALNACT1-211ENST00000522854 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
CSGALNACT1-211ENST00000522854 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.17
CSGALNACT1-211ENST00000522854 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
CSGALNACT1-211ENST00000522854 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
CSGALNACT1-211ENST00000522854 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
CSGALNACT1-211ENST00000522854 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
CSGALNACT1-211ENST00000522854 FAM69CQ0P6D2 419 aa22.3■■□□□ 1.16
CSGALNACT1-211ENST00000522854 ADGRL2O95490 1459 aa22.3■■□□□ 1.16
CSGALNACT1-211ENST00000522854 PLEKHH2Q8IVE3 1493 aa22.3■■□□□ 1.16
CSGALNACT1-211ENST00000522854 AFAP1Q8N556 730 aa22.3■■□□□ 1.16
CSGALNACT1-211ENST00000522854 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
CSGALNACT1-211ENST00000522854 ADGRL1O94910 1474 aa22.28■■□□□ 1.16
CSGALNACT1-211ENST00000522854 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
CSGALNACT1-211ENST00000522854 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
CSGALNACT1-211ENST00000522854 SCAPERQ9BY12 1400 aa22.26■■□□□ 1.15
CSGALNACT1-211ENST00000522854 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
CSGALNACT1-211ENST00000522854 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
CSGALNACT1-211ENST00000522854 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
CSGALNACT1-211ENST00000522854 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
CSGALNACT1-211ENST00000522854 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
CSGALNACT1-211ENST00000522854 GLI2P10070 1586 aa22.23■■□□□ 1.15
CSGALNACT1-211ENST00000522854 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
CSGALNACT1-211ENST00000522854 ANKRD50Q9ULJ7 1429 aa22.2■■□□□ 1.14
CSGALNACT1-211ENST00000522854 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
CSGALNACT1-211ENST00000522854 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
CSGALNACT1-211ENST00000522854 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
CSGALNACT1-211ENST00000522854 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
CSGALNACT1-211ENST00000522854 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
CSGALNACT1-211ENST00000522854 PPRC1Q5VV67 1664 aaKnown RBP22.16■■□□□ 1.14
CSGALNACT1-211ENST00000522854 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
CSGALNACT1-211ENST00000522854 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
CSGALNACT1-211ENST00000522854 RAPGEF3O95398 923 aa22.14■■□□□ 1.14
CSGALNACT1-211ENST00000522854 PLXNC1O60486 1568 aa22.14■■□□□ 1.14
CSGALNACT1-211ENST00000522854 FOXD1Q16676 465 aa22.14■■□□□ 1.13
CSGALNACT1-211ENST00000522854 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
CSGALNACT1-211ENST00000522854 NEO1Q92859 1461 aa22.12■■□□□ 1.13
CSGALNACT1-211ENST00000522854 INO80Q9ULG1 1556 aaPredicted RBP22.12■■□□□ 1.13
CSGALNACT1-211ENST00000522854 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
CSGALNACT1-211ENST00000522854 POGZQ7Z3K3 1410 aa22.11■■□□□ 1.13
CSGALNACT1-211ENST00000522854 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
CSGALNACT1-211ENST00000522854 ZNF518AQ6AHZ1 1483 aa22.1■■□□□ 1.13
CSGALNACT1-211ENST00000522854 CLSPNQ9HAW4 1339 aa22.09■■□□□ 1.13
CSGALNACT1-211ENST00000522854 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
CSGALNACT1-211ENST00000522854 NEUROD1Q13562 356 aa22.08■■□□□ 1.12
CSGALNACT1-211ENST00000522854 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
CSGALNACT1-211ENST00000522854 PZPP20742 1482 aa22.07■■□□□ 1.12
CSGALNACT1-211ENST00000522854 KDM5CP41229 1560 aa22.06■■□□□ 1.12
CSGALNACT1-211ENST00000522854 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
CSGALNACT1-211ENST00000522854 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
CSGALNACT1-211ENST00000522854 NUP155O75694 1391 aa22.05■■□□□ 1.12
CSGALNACT1-211ENST00000522854 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
CSGALNACT1-211ENST00000522854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSGALNACT1-211ENST00000522854 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
CSGALNACT1-211ENST00000522854 HECW2Q9P2P5 1572 aa22.01■■□□□ 1.11
CSGALNACT1-211ENST00000522854 ERBINQ96RT1 1412 aa22■■□□□ 1.11
CSGALNACT1-211ENST00000522854 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
CSGALNACT1-211ENST00000522854 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
CSGALNACT1-211ENST00000522854 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
CSGALNACT1-211ENST00000522854 UNC13BO14795 1591 aa21.97■■□□□ 1.11
CSGALNACT1-211ENST00000522854 MLH3Q9UHC1 1453 aa21.97■■□□□ 1.11
CSGALNACT1-211ENST00000522854 PKD2Q13563 968 aa21.97■■□□□ 1.11
CSGALNACT1-211ENST00000522854 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
CSGALNACT1-211ENST00000522854 FAM135AQ9P2D6 1515 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms