RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
CTNNA1-235ENST00000522730 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
CTNNA1-235ENST00000522730 PTPRMP28827 1452 aa16.49■□□□□ 0.23
CTNNA1-235ENST00000522730 ADRA2BP18089 450 aa16.49■□□□□ 0.23
CTNNA1-235ENST00000522730 RICTORQ6R327 1708 aa16.49■□□□□ 0.23
CTNNA1-235ENST00000522730 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CTNNA1-235ENST00000522730 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
CTNNA1-235ENST00000522730 ZFYVE16Q7Z3T8 1539 aa16.47■□□□□ 0.23
CTNNA1-235ENST00000522730 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
CTNNA1-235ENST00000522730 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
CTNNA1-235ENST00000522730 LRRIQ1Q96JM4 1722 aa16.46■□□□□ 0.23
CTNNA1-235ENST00000522730 ADAMTSL3P82987 1691 aa16.46■□□□□ 0.23
CTNNA1-235ENST00000522730 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
CTNNA1-235ENST00000522730 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
CTNNA1-235ENST00000522730 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
CTNNA1-235ENST00000522730 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
CTNNA1-235ENST00000522730 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
CTNNA1-235ENST00000522730 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
CTNNA1-235ENST00000522730 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
CTNNA1-235ENST00000522730 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
CTNNA1-235ENST00000522730 ILDR1Q86SU0 546 aaPredicted RBP16.42■□□□□ 0.22
CTNNA1-235ENST00000522730 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
CTNNA1-235ENST00000522730 ATP10AO60312 1499 aa16.41■□□□□ 0.22
CTNNA1-235ENST00000522730 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTNNA1-235ENST00000522730 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-235ENST00000522730 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
CTNNA1-235ENST00000522730 CEBPAP49715 358 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-235ENST00000522730 HSPA2P54652 639 aa16.38■□□□□ 0.21
CTNNA1-235ENST00000522730 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
CTNNA1-235ENST00000522730 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
CTNNA1-235ENST00000522730 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
CTNNA1-235ENST00000522730 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
CTNNA1-235ENST00000522730 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
CTNNA1-235ENST00000522730 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
CTNNA1-235ENST00000522730 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
CTNNA1-235ENST00000522730 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
CTNNA1-235ENST00000522730 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
CTNNA1-235ENST00000522730 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
CTNNA1-235ENST00000522730 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
CTNNA1-235ENST00000522730 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
CTNNA1-235ENST00000522730 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
CTNNA1-235ENST00000522730 ZNF644Q9H582 1327 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 CDC42BPAQ5VT25 1732 aa16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 KDM5CP41229 1560 aa16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 ABCC1P33527 1531 aa16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
CTNNA1-235ENST00000522730 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.2
CTNNA1-235ENST00000522730 DIP2CQ9Y2E4 1556 aa16.26■□□□□ 0.19
CTNNA1-235ENST00000522730 ITSN2Q9NZM3 1697 aa16.25■□□□□ 0.19
CTNNA1-235ENST00000522730 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
CTNNA1-235ENST00000522730 ABCA6Q8N139 1617 aa16.24■□□□□ 0.19
CTNNA1-235ENST00000522730 SAMD9LQ8IVG5 1584 aa16.24■□□□□ 0.19
CTNNA1-235ENST00000522730 GGT6Q6P531 493 aa16.22■□□□□ 0.19
CTNNA1-235ENST00000522730 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
CTNNA1-235ENST00000522730 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
CTNNA1-235ENST00000522730 KIDINS220Q9ULH0 1771 aa16.2■□□□□ 0.18
CTNNA1-235ENST00000522730 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
CTNNA1-235ENST00000522730 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
CTNNA1-235ENST00000522730 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
CTNNA1-235ENST00000522730 AGLP35573 1532 aa16.16■□□□□ 0.18
CTNNA1-235ENST00000522730 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
CTNNA1-235ENST00000522730 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
CTNNA1-235ENST00000522730 ATP7AQ04656 1500 aa16.15■□□□□ 0.18
CTNNA1-235ENST00000522730 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-235ENST00000522730 UHRF1BP1Q6BDS2 1440 aa16.15■□□□□ 0.18
CTNNA1-235ENST00000522730 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
CTNNA1-235ENST00000522730 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
CTNNA1-235ENST00000522730 A2MP01023 1474 aa16.14■□□□□ 0.17
CTNNA1-235ENST00000522730 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
CTNNA1-235ENST00000522730 APLP2Q06481 763 aa16.13■□□□□ 0.17
CTNNA1-235ENST00000522730 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
CTNNA1-235ENST00000522730 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
CTNNA1-235ENST00000522730 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
CTNNA1-235ENST00000522730 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
CTNNA1-235ENST00000522730 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
CTNNA1-235ENST00000522730 KIF3BO15066 747 aa16.11■□□□□ 0.17
CTNNA1-235ENST00000522730 SETD1BQ9UPS6 1966 aaKnown RBP16.1■□□□□ 0.17
CTNNA1-235ENST00000522730 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
CTNNA1-235ENST00000522730 CERKQ8TCT0 537 aa16.1■□□□□ 0.17
CTNNA1-235ENST00000522730 C3P01024 1663 aa16.1■□□□□ 0.17
CTNNA1-235ENST00000522730 PREX1Q8TCU6 1659 aa16.1■□□□□ 0.17
CTNNA1-235ENST00000522730 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
CTNNA1-235ENST00000522730 CAMSAP2Q08AD1 1489 aa16.08■□□□□ 0.16
CTNNA1-235ENST00000522730 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-235ENST00000522730 DHX29Q7Z478 1369 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-235ENST00000522730 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
CTNNA1-235ENST00000522730 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
CTNNA1-235ENST00000522730 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
CTNNA1-235ENST00000522730 NCKAP5LQ9HCH0 1330 aa16.03■□□□□ 0.16
CTNNA1-235ENST00000522730 CLTCQ00610 1675 aaKnown RBP16.03■□□□□ 0.16
CTNNA1-235ENST00000522730 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
CTNNA1-235ENST00000522730 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
CTNNA1-235ENST00000522730 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
CTNNA1-235ENST00000522730 NPATQ14207 1427 aa16.01■□□□□ 0.15
CTNNA1-235ENST00000522730 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
CTNNA1-235ENST00000522730 STRCQ7RTU9 1775 aa16■□□□□ 0.15
CTNNA1-235ENST00000522730 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
CTNNA1-235ENST00000522730 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
CTNNA1-235ENST00000522730 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms