RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
SPARC-205ENST00000522348 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
SPARC-205ENST00000522348 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
SPARC-205ENST00000522348 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
SPARC-205ENST00000522348 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
SPARC-205ENST00000522348 ITSN2Q9NZM3 1697 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 ABCC5O15440 1437 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 DAPK1P53355 1430 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 NAIPQ13075 1403 aa14.21□□□□□ -0.13
SPARC-205ENST00000522348 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
SPARC-205ENST00000522348 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
SPARC-205ENST00000522348 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
SPARC-205ENST00000522348 DNMT1P26358 1616 aaKnown RBP14.16□□□□□ -0.14
SPARC-205ENST00000522348 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
SPARC-205ENST00000522348 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
SPARC-205ENST00000522348 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
SPARC-205ENST00000522348 ANKRD30AQ9BXX3 1397 aa14.13□□□□□ -0.15
SPARC-205ENST00000522348 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPARC-205ENST00000522348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPARC-205ENST00000522348 PLCH2O75038 1416 aa14.13□□□□□ -0.15
SPARC-205ENST00000522348 CDC42BPAQ5VT25 1732 aa14.12□□□□□ -0.15
SPARC-205ENST00000522348 TRIM52Q96A61 297 aa14.12□□□□□ -0.15
SPARC-205ENST00000522348 NCOA1Q15788 1441 aa14.11□□□□□ -0.15
SPARC-205ENST00000522348 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
SPARC-205ENST00000522348 KIAA1107Q9UPP5 1409 aa14.1□□□□□ -0.15
SPARC-205ENST00000522348 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
SPARC-205ENST00000522348 WDR7Q9Y4E6 1490 aa14.1□□□□□ -0.15
SPARC-205ENST00000522348 PREX2Q70Z35 1606 aa14.08□□□□□ -0.15
SPARC-205ENST00000522348 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
SPARC-205ENST00000522348 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
SPARC-205ENST00000522348 ARHGAP5Q13017 1502 aa14.08□□□□□ -0.16
SPARC-205ENST00000522348 ARHGEF5Q12774 1597 aa14.08□□□□□ -0.16
SPARC-205ENST00000522348 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
SPARC-205ENST00000522348 ASXL2Q76L83 1435 aa14.07□□□□□ -0.16
SPARC-205ENST00000522348 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
SPARC-205ENST00000522348 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
SPARC-205ENST00000522348 TTC37Q6PGP7 1564 aa14.06□□□□□ -0.16
SPARC-205ENST00000522348 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
SPARC-205ENST00000522348 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
SPARC-205ENST00000522348 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
SPARC-205ENST00000522348 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
SPARC-205ENST00000522348 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
SPARC-205ENST00000522348 ARAP3Q8WWN8 1544 aa14.05□□□□□ -0.16
SPARC-205ENST00000522348 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
SPARC-205ENST00000522348 FAM69CQ0P6D2 419 aa14.04□□□□□ -0.16
SPARC-205ENST00000522348 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
SPARC-205ENST00000522348 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
SPARC-205ENST00000522348 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
SPARC-205ENST00000522348 ANKRD50Q9ULJ7 1429 aa14.01□□□□□ -0.17
SPARC-205ENST00000522348 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
SPARC-205ENST00000522348 CROCC2H7BZ55 1655 aa14□□□□□ -0.17
SPARC-205ENST00000522348 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
SPARC-205ENST00000522348 KDM6BO15054 1643 aa13.99□□□□□ -0.17
SPARC-205ENST00000522348 ABCA9Q8IUA7 1624 aa13.98□□□□□ -0.17
SPARC-205ENST00000522348 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
SPARC-205ENST00000522348 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
SPARC-205ENST00000522348 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
SPARC-205ENST00000522348 ARHGEF12Q9NZN5 1544 aa13.96□□□□□ -0.17
SPARC-205ENST00000522348 RTEL1-TNFRSF6BF6WH68 1400 aa13.96□□□□□ -0.18
SPARC-205ENST00000522348 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
SPARC-205ENST00000522348 FANCAO15360 1455 aa13.95□□□□□ -0.18
SPARC-205ENST00000522348 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
SPARC-205ENST00000522348 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
SPARC-205ENST00000522348 AFAP1Q8N556 730 aa13.94□□□□□ -0.18
SPARC-205ENST00000522348 NUP155O75694 1391 aa13.94□□□□□ -0.18
SPARC-205ENST00000522348 TRAPPC8Q9Y2L5 1435 aa13.93□□□□□ -0.18
SPARC-205ENST00000522348 ABCC1P33527 1531 aa13.93□□□□□ -0.18
SPARC-205ENST00000522348 ANKRD30BQ9BXX2 1392 aa13.93□□□□□ -0.18
SPARC-205ENST00000522348 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
SPARC-205ENST00000522348 SCAPERQ9BY12 1400 aa13.92□□□□□ -0.18
SPARC-205ENST00000522348 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
SPARC-205ENST00000522348 PKD2Q13563 968 aa13.91□□□□□ -0.18
SPARC-205ENST00000522348 PZPP20742 1482 aa13.91□□□□□ -0.18
SPARC-205ENST00000522348 FOXD1Q16676 465 aa13.9□□□□□ -0.18
SPARC-205ENST00000522348 ADGRL1O94910 1474 aa13.9□□□□□ -0.18
SPARC-205ENST00000522348 DUOX2Q9NRD8 1548 aa13.9□□□□□ -0.19
SPARC-205ENST00000522348 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
SPARC-205ENST00000522348 KIF13AQ9H1H9 1805 aa13.88□□□□□ -0.19
SPARC-205ENST00000522348 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
SPARC-205ENST00000522348 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
SPARC-205ENST00000522348 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
SPARC-205ENST00000522348 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
SPARC-205ENST00000522348 GLI2P10070 1586 aa13.86□□□□□ -0.19
SPARC-205ENST00000522348 NEO1Q92859 1461 aa13.86□□□□□ -0.19
SPARC-205ENST00000522348 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
SPARC-205ENST00000522348 L3MBTL2Q969R5 705 aa13.84□□□□□ -0.19
SPARC-205ENST00000522348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPARC-205ENST00000522348 RPRD2Q5VT52 1461 aaKnown RBP13.84□□□□□ -0.19
SPARC-205ENST00000522348 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
SPARC-205ENST00000522348 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
SPARC-205ENST00000522348 ZNF518AQ6AHZ1 1483 aa13.82□□□□□ -0.2
SPARC-205ENST00000522348 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
SPARC-205ENST00000522348 ATP7AQ04656 1500 aa13.8□□□□□ -0.2
SPARC-205ENST00000522348 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
SPARC-205ENST00000522348 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
SPARC-205ENST00000522348 MAP3K4Q9Y6R4 1608 aa13.79□□□□□ -0.2
SPARC-205ENST00000522348 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
SPARC-205ENST00000522348 UNC13BO14795 1591 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms