RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
SPIDR-219ENST00000522321 KDM4FA0A1W2PPD8 638 aa18.74■□□□□ 0.59
SPIDR-219ENST00000522321 FAM50AQ14320 339 aaKnown RBP18.74■□□□□ 0.59
SPIDR-219ENST00000522321 ZNF777Q9ULD5 760 aaPredicted RBP18.74■□□□□ 0.59
SPIDR-219ENST00000522321 PLCH2O75038 1416 aa18.74■□□□□ 0.59
SPIDR-219ENST00000522321 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
SPIDR-219ENST00000522321 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
SPIDR-219ENST00000522321 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
SPIDR-219ENST00000522321 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
SPIDR-219ENST00000522321 PTPN23Q9H3S7 1636 aa18.71■□□□□ 0.58
SPIDR-219ENST00000522321 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
SPIDR-219ENST00000522321 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
SPIDR-219ENST00000522321 FANCAO15360 1455 aa18.68■□□□□ 0.58
SPIDR-219ENST00000522321 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
SPIDR-219ENST00000522321 MAP3K4Q9Y6R4 1608 aa18.67■□□□□ 0.58
SPIDR-219ENST00000522321 TCOF1Q13428 1488 aaKnown RBP18.67■□□□□ 0.58
SPIDR-219ENST00000522321 PLEKHH2Q8IVE3 1493 aa18.66■□□□□ 0.58
SPIDR-219ENST00000522321 TEX14Q8IWB6 1497 aa18.66■□□□□ 0.58
SPIDR-219ENST00000522321 ITGAEP38570 1179 aa18.64■□□□□ 0.57
SPIDR-219ENST00000522321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPIDR-219ENST00000522321 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
SPIDR-219ENST00000522321 SAMD9LQ8IVG5 1584 aa18.63■□□□□ 0.57
SPIDR-219ENST00000522321 ZNF644Q9H582 1327 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-219ENST00000522321 NEO1Q92859 1461 aa18.62■□□□□ 0.57
SPIDR-219ENST00000522321 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
SPIDR-219ENST00000522321 ABCC1P33527 1531 aa18.6■□□□□ 0.57
SPIDR-219ENST00000522321 SYCP2Q9BX26 1530 aa18.6■□□□□ 0.57
SPIDR-219ENST00000522321 AKNAQ7Z591 1439 aa18.59■□□□□ 0.57
SPIDR-219ENST00000522321 KIAA1107Q9UPP5 1409 aa18.58■□□□□ 0.57
SPIDR-219ENST00000522321 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
SPIDR-219ENST00000522321 CCDC141Q6ZP82 1450 aa18.57■□□□□ 0.56
SPIDR-219ENST00000522321 DAPK1P53355 1430 aa18.56■□□□□ 0.56
SPIDR-219ENST00000522321 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
SPIDR-219ENST00000522321 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
SPIDR-219ENST00000522321 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
SPIDR-219ENST00000522321 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
SPIDR-219ENST00000522321 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
SPIDR-219ENST00000522321 TSPY4P0CV99 314 aa18.53■□□□□ 0.56
SPIDR-219ENST00000522321 TSPY10P0CW01 314 aa18.53■□□□□ 0.56
SPIDR-219ENST00000522321 ABCC5O15440 1437 aa18.52■□□□□ 0.56
SPIDR-219ENST00000522321 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.55
SPIDR-219ENST00000522321 MBD5Q9P267 1494 aa18.52■□□□□ 0.55
SPIDR-219ENST00000522321 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
SPIDR-219ENST00000522321 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
SPIDR-219ENST00000522321 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
SPIDR-219ENST00000522321 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
SPIDR-219ENST00000522321 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
SPIDR-219ENST00000522321 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
SPIDR-219ENST00000522321 ARHGEF12Q9NZN5 1544 aa18.5■□□□□ 0.55
SPIDR-219ENST00000522321 TRAPPC8Q9Y2L5 1435 aa18.49■□□□□ 0.55
SPIDR-219ENST00000522321 COL17A1Q9UMD9 1497 aaPredicted RBP18.48■□□□□ 0.55
SPIDR-219ENST00000522321 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
SPIDR-219ENST00000522321 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
SPIDR-219ENST00000522321 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
SPIDR-219ENST00000522321 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
SPIDR-219ENST00000522321 ANKRD30AQ9BXX3 1397 aa18.45■□□□□ 0.54
SPIDR-219ENST00000522321 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
SPIDR-219ENST00000522321 PTPRKQ15262 1439 aa18.44■□□□□ 0.54
SPIDR-219ENST00000522321 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
SPIDR-219ENST00000522321 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
SPIDR-219ENST00000522321 ADGBQ8N7X0 1667 aa18.42■□□□□ 0.54
SPIDR-219ENST00000522321 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
SPIDR-219ENST00000522321 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
SPIDR-219ENST00000522321 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
SPIDR-219ENST00000522321 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
SPIDR-219ENST00000522321 KDM5CP41229 1560 aa18.4■□□□□ 0.54
SPIDR-219ENST00000522321 HECW2Q9P2P5 1572 aa18.4■□□□□ 0.54
SPIDR-219ENST00000522321 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
SPIDR-219ENST00000522321 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
SPIDR-219ENST00000522321 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
SPIDR-219ENST00000522321 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-219ENST00000522321 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
SPIDR-219ENST00000522321 PLXNC1O60486 1568 aa18.37■□□□□ 0.53
SPIDR-219ENST00000522321 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
SPIDR-219ENST00000522321 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
SPIDR-219ENST00000522321 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
SPIDR-219ENST00000522321 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
SPIDR-219ENST00000522321 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
SPIDR-219ENST00000522321 MLH3Q9UHC1 1453 aa18.36■□□□□ 0.53
SPIDR-219ENST00000522321 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.53
SPIDR-219ENST00000522321 NAIPQ13075 1403 aa18.33■□□□□ 0.53
SPIDR-219ENST00000522321 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
SPIDR-219ENST00000522321 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
SPIDR-219ENST00000522321 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
SPIDR-219ENST00000522321 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
SPIDR-219ENST00000522321 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
SPIDR-219ENST00000522321 KIDINS220Q9ULH0 1771 aa18.29■□□□□ 0.52
SPIDR-219ENST00000522321 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
SPIDR-219ENST00000522321 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
SPIDR-219ENST00000522321 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
SPIDR-219ENST00000522321 A2MP01023 1474 aa18.27■□□□□ 0.52
SPIDR-219ENST00000522321 DIP2CQ9Y2E4 1556 aa18.27■□□□□ 0.52
SPIDR-219ENST00000522321 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
SPIDR-219ENST00000522321 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
SPIDR-219ENST00000522321 ATP10AO60312 1499 aa18.23■□□□□ 0.51
SPIDR-219ENST00000522321 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
SPIDR-219ENST00000522321 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
SPIDR-219ENST00000522321 HRCP23327 699 aa18.2■□□□□ 0.5
SPIDR-219ENST00000522321 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
SPIDR-219ENST00000522321 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms