RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
CDH12-208ENST00000522262 KDM6BO15054 1643 aa10.58□□□□□ -0.72
CDH12-208ENST00000522262 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
CDH12-208ENST00000522262 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
CDH12-208ENST00000522262 NEO1Q92859 1461 aa10.58□□□□□ -0.72
CDH12-208ENST00000522262 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
CDH12-208ENST00000522262 AKNAQ7Z591 1439 aa10.57□□□□□ -0.72
CDH12-208ENST00000522262 RICTORQ6R327 1708 aa10.56□□□□□ -0.72
CDH12-208ENST00000522262 ABCC1P33527 1531 aa10.56□□□□□ -0.72
CDH12-208ENST00000522262 ZNF644Q9H582 1327 aaPredicted RBP10.56□□□□□ -0.72
CDH12-208ENST00000522262 ITSN2Q9NZM3 1697 aa10.55□□□□□ -0.72
CDH12-208ENST00000522262 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
CDH12-208ENST00000522262 CFAP74Q9C0B2 1584 aa10.55□□□□□ -0.72
CDH12-208ENST00000522262 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
CDH12-208ENST00000522262 RAPGEF3O95398 923 aa10.54□□□□□ -0.72
CDH12-208ENST00000522262 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
CDH12-208ENST00000522262 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
CDH12-208ENST00000522262 TRAPPC8Q9Y2L5 1435 aa10.53□□□□□ -0.72
CDH12-208ENST00000522262 SCAPERQ9BY12 1400 aa10.52□□□□□ -0.73
CDH12-208ENST00000522262 POGZQ7Z3K3 1410 aa10.52□□□□□ -0.73
CDH12-208ENST00000522262 CAMSAP2Q08AD1 1489 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 APLP2Q06481 763 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 SIGLEC1Q9BZZ2 1709 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 EFCAB2Q5VUJ9 269 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 KDM5CP41229 1560 aa10.51□□□□□ -0.73
CDH12-208ENST00000522262 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
CDH12-208ENST00000522262 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
CDH12-208ENST00000522262 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
CDH12-208ENST00000522262 ZMYM4Q5VZL5 1548 aa10.49□□□□□ -0.73
CDH12-208ENST00000522262 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
CDH12-208ENST00000522262 FGD6Q6ZV73 1430 aa10.49□□□□□ -0.73
CDH12-208ENST00000522262 AFAP1Q8N556 730 aa10.49□□□□□ -0.73
CDH12-208ENST00000522262 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDH12-208ENST00000522262 YEATS2Q9ULM3 1422 aa10.48□□□□□ -0.73
CDH12-208ENST00000522262 MIA2Q96PC5 1412 aa10.48□□□□□ -0.73
CDH12-208ENST00000522262 KIAA1107Q9UPP5 1409 aa10.48□□□□□ -0.73
CDH12-208ENST00000522262 TCOF1Q13428 1488 aaKnown RBP10.47□□□□□ -0.73
CDH12-208ENST00000522262 KIDINS220Q9ULH0 1771 aa10.47□□□□□ -0.73
CDH12-208ENST00000522262 ZNF518AQ6AHZ1 1483 aa10.46□□□□□ -0.73
CDH12-208ENST00000522262 ABCA6Q8N139 1617 aa10.46□□□□□ -0.74
CDH12-208ENST00000522262 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
CDH12-208ENST00000522262 ZFYVE16Q7Z3T8 1539 aa10.45□□□□□ -0.74
CDH12-208ENST00000522262 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
CDH12-208ENST00000522262 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
CDH12-208ENST00000522262 HECW2Q9P2P5 1572 aa10.45□□□□□ -0.74
CDH12-208ENST00000522262 DIP2CQ9Y2E4 1556 aa10.44□□□□□ -0.74
CDH12-208ENST00000522262 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
CDH12-208ENST00000522262 PLEKHH2Q8IVE3 1493 aa10.43□□□□□ -0.74
CDH12-208ENST00000522262 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
CDH12-208ENST00000522262 ABCC5O15440 1437 aa10.43□□□□□ -0.74
CDH12-208ENST00000522262 PTPRKQ15262 1439 aa10.43□□□□□ -0.74
CDH12-208ENST00000522262 CCDC141Q6ZP82 1450 aa10.43□□□□□ -0.74
CDH12-208ENST00000522262 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
CDH12-208ENST00000522262 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
CDH12-208ENST00000522262 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
CDH12-208ENST00000522262 MAGI2Q86UL8 1455 aa10.41□□□□□ -0.74
CDH12-208ENST00000522262 DAPK1P53355 1430 aa10.4□□□□□ -0.74
CDH12-208ENST00000522262 ADGBQ8N7X0 1667 aa10.4□□□□□ -0.74
CDH12-208ENST00000522262 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.75
CDH12-208ENST00000522262 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
CDH12-208ENST00000522262 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
CDH12-208ENST00000522262 SPAG9O60271 1321 aaKnown RBP10.37□□□□□ -0.75
CDH12-208ENST00000522262 SHANK2Q9UPX8 1470 aa10.37□□□□□ -0.75
CDH12-208ENST00000522262 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
CDH12-208ENST00000522262 ATP10AO60312 1499 aa10.37□□□□□ -0.75
CDH12-208ENST00000522262 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
CDH12-208ENST00000522262 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
CDH12-208ENST00000522262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDH12-208ENST00000522262 BCORL1Q5H9F3 1711 aa10.34□□□□□ -0.75
CDH12-208ENST00000522262 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
CDH12-208ENST00000522262 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.75
CDH12-208ENST00000522262 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.75
CDH12-208ENST00000522262 A2MP01023 1474 aa10.33□□□□□ -0.76
CDH12-208ENST00000522262 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CDH12-208ENST00000522262 ADAMTSL3P82987 1691 aa10.33□□□□□ -0.76
CDH12-208ENST00000522262 RSPH4AQ5TD94 716 aa10.33□□□□□ -0.76
CDH12-208ENST00000522262 AGLP35573 1532 aa10.32□□□□□ -0.76
CDH12-208ENST00000522262 MROH1Q8NDA8 1641 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 TSPY4P0CV99 314 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 TSPY10P0CW01 314 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 ITGAEP38570 1179 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
CDH12-208ENST00000522262 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
CDH12-208ENST00000522262 KIF15Q9NS87 1388 aa10.3□□□□□ -0.76
CDH12-208ENST00000522262 RRP7BPQ9NSQ0 103 aa10.3□□□□□ -0.76
CDH12-208ENST00000522262 DUOX2Q9NRD8 1548 aa10.29□□□□□ -0.76
CDH12-208ENST00000522262 MLECQ14165 292 aa10.28□□□□□ -0.76
CDH12-208ENST00000522262 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
CDH12-208ENST00000522262 FER1L4A9Z1Z3 1794 aa10.27□□□□□ -0.76
CDH12-208ENST00000522262 EIF2AK4Q9P2K8 1649 aaKnown RBP10.27□□□□□ -0.77
CDH12-208ENST00000522262 ROCK1Q13464 1354 aa10.27□□□□□ -0.77
CDH12-208ENST00000522262 ARID4BQ4LE39 1312 aaPredicted RBP10.27□□□□□ -0.77
CDH12-208ENST00000522262 DEPDC5O75140 1603 aa10.27□□□□□ -0.77
CDH12-208ENST00000522262 RIMS1Q86UR5 1692 aaKnown RBP10.26□□□□□ -0.77
CDH12-208ENST00000522262 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
CDH12-208ENST00000522262 ERBINQ96RT1 1412 aa10.26□□□□□ -0.77
CDH12-208ENST00000522262 NAIPQ13075 1403 aa10.26□□□□□ -0.77
CDH12-208ENST00000522262 GCC2Q8IWJ2 1684 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms