RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
SHPRH-209ENST00000521977 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
SHPRH-209ENST00000521977 ARID3CA6NKF2 412 aa14.59□□□□□ -0.07
SHPRH-209ENST00000521977 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
SHPRH-209ENST00000521977 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
SHPRH-209ENST00000521977 CCNB3Q8WWL7 1395 aa14.55□□□□□ -0.08
SHPRH-209ENST00000521977 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
SHPRH-209ENST00000521977 POLA2Q14181 598 aa14.54□□□□□ -0.08
SHPRH-209ENST00000521977 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
SHPRH-209ENST00000521977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHPRH-209ENST00000521977 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
SHPRH-209ENST00000521977 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.08
SHPRH-209ENST00000521977 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.08
SHPRH-209ENST00000521977 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.08
SHPRH-209ENST00000521977 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
SHPRH-209ENST00000521977 ZBTB22O15209 634 aa14.52□□□□□ -0.09
SHPRH-209ENST00000521977 KIF14Q15058 1648 aa14.51□□□□□ -0.09
SHPRH-209ENST00000521977 ABCC10Q5T3U5 1492 aa14.5□□□□□ -0.09
SHPRH-209ENST00000521977 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
SHPRH-209ENST00000521977 TCOF1Q13428 1488 aaKnown RBP14.48□□□□□ -0.09
SHPRH-209ENST00000521977 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
SHPRH-209ENST00000521977 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.1
SHPRH-209ENST00000521977 PTPN23Q9H3S7 1636 aa14.45□□□□□ -0.1
SHPRH-209ENST00000521977 ITSN2Q9NZM3 1697 aa14.45□□□□□ -0.1
SHPRH-209ENST00000521977 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
SHPRH-209ENST00000521977 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
SHPRH-209ENST00000521977 WDR7Q9Y4E6 1490 aa14.43□□□□□ -0.1
SHPRH-209ENST00000521977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHPRH-209ENST00000521977 CDC42BPAQ5VT25 1732 aa14.42□□□□□ -0.1
SHPRH-209ENST00000521977 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
SHPRH-209ENST00000521977 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
SHPRH-209ENST00000521977 FAM50AQ14320 339 aaKnown RBP14.4□□□□□ -0.1
SHPRH-209ENST00000521977 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
SHPRH-209ENST00000521977 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHPRH-209ENST00000521977 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
SHPRH-209ENST00000521977 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
SHPRH-209ENST00000521977 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
SHPRH-209ENST00000521977 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
SHPRH-209ENST00000521977 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
SHPRH-209ENST00000521977 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
SHPRH-209ENST00000521977 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
SHPRH-209ENST00000521977 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
SHPRH-209ENST00000521977 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
SHPRH-209ENST00000521977 PLCH2O75038 1416 aa14.34□□□□□ -0.11
SHPRH-209ENST00000521977 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
SHPRH-209ENST00000521977 ARAP3Q8WWN8 1544 aa14.34□□□□□ -0.11
SHPRH-209ENST00000521977 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.11
SHPRH-209ENST00000521977 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
SHPRH-209ENST00000521977 ITGAEP38570 1179 aa14.32□□□□□ -0.12
SHPRH-209ENST00000521977 DAPK1P53355 1430 aa14.32□□□□□ -0.12
SHPRH-209ENST00000521977 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
SHPRH-209ENST00000521977 ABCC5O15440 1437 aa14.31□□□□□ -0.12
SHPRH-209ENST00000521977 ARHGAP5Q13017 1502 aa14.3□□□□□ -0.12
SHPRH-209ENST00000521977 AKNAQ7Z591 1439 aa14.29□□□□□ -0.12
SHPRH-209ENST00000521977 MBD5Q9P267 1494 aa14.29□□□□□ -0.12
SHPRH-209ENST00000521977 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
SHPRH-209ENST00000521977 ARHGEF5Q12774 1597 aa14.28□□□□□ -0.12
SHPRH-209ENST00000521977 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
SHPRH-209ENST00000521977 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.12
SHPRH-209ENST00000521977 PLEKHH2Q8IVE3 1493 aa14.27□□□□□ -0.12
SHPRH-209ENST00000521977 KIAA1107Q9UPP5 1409 aa14.27□□□□□ -0.12
SHPRH-209ENST00000521977 ROCK1Q13464 1354 aa14.27□□□□□ -0.12
SHPRH-209ENST00000521977 ZNF777Q9ULD5 760 aaPredicted RBP14.27□□□□□ -0.13
SHPRH-209ENST00000521977 GLI2P10070 1586 aa14.26□□□□□ -0.13
SHPRH-209ENST00000521977 HRCP23327 699 aa14.26□□□□□ -0.13
SHPRH-209ENST00000521977 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
SHPRH-209ENST00000521977 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
SHPRH-209ENST00000521977 POTEHQ6S545 545 aa14.25□□□□□ -0.13
SHPRH-209ENST00000521977 ADGRL2O95490 1459 aa14.25□□□□□ -0.13
SHPRH-209ENST00000521977 NAIPQ13075 1403 aa14.24□□□□□ -0.13
SHPRH-209ENST00000521977 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
SHPRH-209ENST00000521977 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
SHPRH-209ENST00000521977 ABCC1P33527 1531 aa14.24□□□□□ -0.13
SHPRH-209ENST00000521977 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
SHPRH-209ENST00000521977 ARHGEF12Q9NZN5 1544 aa14.23□□□□□ -0.13
SHPRH-209ENST00000521977 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
SHPRH-209ENST00000521977 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
SHPRH-209ENST00000521977 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
SHPRH-209ENST00000521977 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHPRH-209ENST00000521977 FANCAO15360 1455 aa14.22□□□□□ -0.13
SHPRH-209ENST00000521977 ADGBQ8N7X0 1667 aa14.22□□□□□ -0.13
SHPRH-209ENST00000521977 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
SHPRH-209ENST00000521977 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
SHPRH-209ENST00000521977 MAST1Q9Y2H9 1570 aa14.21□□□□□ -0.14
SHPRH-209ENST00000521977 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
SHPRH-209ENST00000521977 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
SHPRH-209ENST00000521977 C9orf84Q5VXU9 1444 aa14.2□□□□□ -0.14
SHPRH-209ENST00000521977 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
SHPRH-209ENST00000521977 TSPY4P0CV99 314 aa14.17□□□□□ -0.14
SHPRH-209ENST00000521977 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
SHPRH-209ENST00000521977 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
SHPRH-209ENST00000521977 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
SHPRH-209ENST00000521977 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
SHPRH-209ENST00000521977 ANKRD30AQ9BXX3 1397 aa14.17□□□□□ -0.14
SHPRH-209ENST00000521977 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
SHPRH-209ENST00000521977 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
SHPRH-209ENST00000521977 NEO1Q92859 1461 aa14.16□□□□□ -0.14
SHPRH-209ENST00000521977 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
SHPRH-209ENST00000521977 KDM6BO15054 1643 aa14.15□□□□□ -0.14
SHPRH-209ENST00000521977 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms