RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ZFYVE16Q7Z3T8 1539 aa33.29■■■□□ 2.92
PABPC1-217ENST00000521067 MAGI2Q86UL8 1455 aa33.29■■■□□ 2.92
PABPC1-217ENST00000521067 KIF14Q15058 1648 aa33.28■■■□□ 2.92
PABPC1-217ENST00000521067 SIGLEC1Q9BZZ2 1709 aa33.27■■■□□ 2.92
PABPC1-217ENST00000521067 LRRIQ1Q96JM4 1722 aa33.22■■■□□ 2.91
PABPC1-217ENST00000521067 MLECQ14165 292 aa33.22■■■□□ 2.91
PABPC1-217ENST00000521067 AFAP1Q8N556 730 aa33.2■■■□□ 2.91
PABPC1-217ENST00000521067 RIMS1Q86UR5 1692 aaKnown RBP33.19■■■□□ 2.9
PABPC1-217ENST00000521067 MYO5CQ9NQX4 1742 aa33.19■■■□□ 2.9
PABPC1-217ENST00000521067 CLIP1P30622 1438 aa33.19■■■□□ 2.9
PABPC1-217ENST00000521067 CASKIN1Q8WXD9 1431 aa33.19■■■□□ 2.9
PABPC1-217ENST00000521067 PLPPR3Q6T4P5 718 aa33.18■■■□□ 2.9
PABPC1-217ENST00000521067 LMTK3Q96Q04 1460 aa33.17■■■□□ 2.9
PABPC1-217ENST00000521067 ATP10AO60312 1499 aa33.16■■■□□ 2.9
PABPC1-217ENST00000521067 ARHGAP5Q13017 1502 aa33.14■■■□□ 2.9
PABPC1-217ENST00000521067 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
PABPC1-217ENST00000521067 ZNF518AQ6AHZ1 1483 aa33.09■■■□□ 2.89
PABPC1-217ENST00000521067 C9orf84Q5VXU9 1444 aa33.08■■■□□ 2.89
PABPC1-217ENST00000521067 HSPA2P54652 639 aa33.07■■■□□ 2.88
PABPC1-217ENST00000521067 CCDC18Q5T9S5 1454 aa33.06■■■□□ 2.88
PABPC1-217ENST00000521067 KDM5CP41229 1560 aa33.04■■■□□ 2.88
PABPC1-217ENST00000521067 ARHGEF12Q9NZN5 1544 aa33.03■■■□□ 2.88
PABPC1-217ENST00000521067 CDC42BPBQ9Y5S2 1711 aa33.03■■■□□ 2.88
PABPC1-217ENST00000521067 TRAPPC8Q9Y2L5 1435 aa33.02■■■□□ 2.88
PABPC1-217ENST00000521067 MYT1LQ9UL68 1186 aa33.01■■■□□ 2.87
PABPC1-217ENST00000521067 CEBPAP49715 358 aaPredicted RBP32.99■■■□□ 2.87
PABPC1-217ENST00000521067 FYCO1Q9BQS8 1478 aa32.99■■■□□ 2.87
PABPC1-217ENST00000521067 FER1L4A9Z1Z3 1794 aa32.96■■■□□ 2.87
PABPC1-217ENST00000521067 MLH3Q9UHC1 1453 aa32.95■■■□□ 2.87
PABPC1-217ENST00000521067 PREX2Q70Z35 1606 aa32.95■■■□□ 2.86
PABPC1-217ENST00000521067 ABCC1P33527 1531 aa32.93■■■□□ 2.86
PABPC1-217ENST00000521067 DIP2CQ9Y2E4 1556 aa32.93■■■□□ 2.86
PABPC1-217ENST00000521067 FBXO41Q8TF61 875 aa32.92■■■□□ 2.86
PABPC1-217ENST00000521067 ZNF777Q9ULD5 760 aaPredicted RBP32.89■■■□□ 2.86
PABPC1-217ENST00000521067 ABCA6Q8N139 1617 aa32.87■■■□□ 2.85
PABPC1-217ENST00000521067 GPATCH8Q9UKJ3 1502 aaKnown RBP32.87■■■□□ 2.85
PABPC1-217ENST00000521067 CDC42BPAQ5VT25 1732 aa32.86■■■□□ 2.85
PABPC1-217ENST00000521067 REREQ9P2R6 1566 aa32.84■■■□□ 2.85
PABPC1-217ENST00000521067 ITSN2Q9NZM3 1697 aa32.83■■■□□ 2.85
PABPC1-217ENST00000521067 HNRNPMP52272 730 aaKnown RBP eCLIP32.82■■■□□ 2.84
PABPC1-217ENST00000521067 KIDINS220Q9ULH0 1771 aa32.78■■■□□ 2.84
PABPC1-217ENST00000521067 AGLP35573 1532 aa32.78■■■□□ 2.84
PABPC1-217ENST00000521067 SAMD9LQ8IVG5 1584 aa32.78■■■□□ 2.84
PABPC1-217ENST00000521067 CFDP1Q9UEE9 299 aaPredicted RBP32.76■■■□□ 2.83
PABPC1-217ENST00000521067 SYCP2Q9BX26 1530 aa32.73■■■□□ 2.83
PABPC1-217ENST00000521067 SPAG9O60271 1321 aaKnown RBP32.73■■■□□ 2.83
PABPC1-217ENST00000521067 CCNB3Q8WWL7 1395 aa32.72■■■□□ 2.83
PABPC1-217ENST00000521067 MTUS2Q5JR59 1369 aa32.71■■■□□ 2.83
PABPC1-217ENST00000521067 KIAA1107Q9UPP5 1409 aa32.69■■■□□ 2.82
PABPC1-217ENST00000521067 PREX1Q8TCU6 1659 aa32.69■■■□□ 2.82
PABPC1-217ENST00000521067 ESF1Q9H501 851 aaKnown RBP32.68■■■□□ 2.82
PABPC1-217ENST00000521067 ZNF644Q9H582 1327 aaPredicted RBP32.67■■■□□ 2.82
PABPC1-217ENST00000521067 UHRF1BP1Q6BDS2 1440 aa32.66■■■□□ 2.82
PABPC1-217ENST00000521067 CEP162Q5TB80 1403 aa32.65■■■□□ 2.82
PABPC1-217ENST00000521067 SETD1BQ9UPS6 1966 aaKnown RBP32.65■■■□□ 2.82
PABPC1-217ENST00000521067 CERKQ8TCT0 537 aa32.63■■■□□ 2.81
PABPC1-217ENST00000521067 C3P01024 1663 aa32.62■■■□□ 2.81
PABPC1-217ENST00000521067 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
PABPC1-217ENST00000521067 CNTLNQ9NXG0 1405 aa32.58■■■□□ 2.81
PABPC1-217ENST00000521067 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
PABPC1-217ENST00000521067 STRCQ7RTU9 1775 aa32.56■■■□□ 2.8
PABPC1-217ENST00000521067 TIAM1Q13009 1591 aa32.55■■■□□ 2.8
PABPC1-217ENST00000521067 DMRT2Q9Y5R5 561 aa32.54■■■□□ 2.8
PABPC1-217ENST00000521067 ZMYM3Q14202 1370 aa32.54■■■□□ 2.8
PABPC1-217ENST00000521067 A2MP01023 1474 aa32.54■■■□□ 2.8
PABPC1-217ENST00000521067 MBD5Q9P267 1494 aa32.54■■■□□ 2.8
PABPC1-217ENST00000521067 INO80Q9ULG1 1556 aaPredicted RBP32.53■■■□□ 2.8
PABPC1-217ENST00000521067 EHBP1L1Q8N3D4 1523 aa32.53■■■□□ 2.8
PABPC1-217ENST00000521067 LOC105371045A0A1W2PR82 267 aa32.51■■■□□ 2.79
PABPC1-217ENST00000521067 SUPT6HQ7KZ85 1726 aaKnown RBP32.51■■■□□ 2.79
PABPC1-217ENST00000521067 PLXNC1O60486 1568 aa32.5■■■□□ 2.79
PABPC1-217ENST00000521067 GGT6Q6P531 493 aa32.49■■■□□ 2.79
PABPC1-217ENST00000521067 NPATQ14207 1427 aa32.44■■■□□ 2.78
PABPC1-217ENST00000521067 PTPRTO14522 1441 aa32.42■■■□□ 2.78
PABPC1-217ENST00000521067 NCOA2Q15596 1464 aa32.42■■■□□ 2.78
PABPC1-217ENST00000521067 MROH2AA6NES4 1674 aa32.4■■■□□ 2.78
PABPC1-217ENST00000521067 RTEL1-TNFRSF6BF6WH68 1400 aa32.4■■■□□ 2.78
PABPC1-217ENST00000521067 NCOA1Q15788 1441 aa32.38■■■□□ 2.77
PABPC1-217ENST00000521067 CLTCQ00610 1675 aaKnown RBP32.37■■■□□ 2.77
PABPC1-217ENST00000521067 PTPRKQ15262 1439 aa32.36■■■□□ 2.77
PABPC1-217ENST00000521067 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
PABPC1-217ENST00000521067 PPP6R1Q9UPN7 881 aa32.36■■■□□ 2.77
PABPC1-217ENST00000521067 ADGBQ8N7X0 1667 aa32.33■■■□□ 2.77
PABPC1-217ENST00000521067 CAMSAP2Q08AD1 1489 aa32.32■■■□□ 2.76
PABPC1-217ENST00000521067 NCKAP5LQ9HCH0 1330 aa32.31■■■□□ 2.76
PABPC1-217ENST00000521067 CCDC141Q6ZP82 1450 aa32.3■■■□□ 2.76
PABPC1-217ENST00000521067 RSPH4AQ5TD94 716 aa32.3■■■□□ 2.76
PABPC1-217ENST00000521067 VPS8Q8N3P4 1428 aa32.3■■■□□ 2.76
PABPC1-217ENST00000521067 CAMSAP1Q5T5Y3 1602 aa32.29■■■□□ 2.76
PABPC1-217ENST00000521067 KIF3BO15066 747 aa32.28■■■□□ 2.76
PABPC1-217ENST00000521067 KANK4Q5T7N3 995 aaPredicted RBP32.28■■■□□ 2.76
PABPC1-217ENST00000521067 LRRC9Q6ZRR7 1453 aa32.26■■■□□ 2.75
PABPC1-217ENST00000521067 LTBP4Q8N2S1 1624 aa32.24■■■□□ 2.75
PABPC1-217ENST00000521067 FBXO31Q5XUX0 539 aaPredicted RBP32.22■■■□□ 2.75
PABPC1-217ENST00000521067 MYO3AQ8NEV4 1616 aa32.2■■■□□ 2.75
PABPC1-217ENST00000521067 TSPY4P0CV99 314 aa32.2■■■□□ 2.75
PABPC1-217ENST00000521067 TSPY10P0CW01 314 aa32.2■■■□□ 2.75
PABPC1-217ENST00000521067 CEP170BQ9Y4F5 1589 aaPredicted RBP32.18■■■□□ 2.74
PABPC1-217ENST00000521067 PKD2Q13563 968 aa32.17■■■□□ 2.74
PABPC1-217ENST00000521067 PLA2R1Q13018 1463 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms