RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 CDC42BPAQ5VT25 1732 aa13.12□□□□□ -0.31
PDGFRB-208ENST00000520851 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
PDGFRB-208ENST00000520851 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
PDGFRB-208ENST00000520851 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
PDGFRB-208ENST00000520851 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDGFRB-208ENST00000520851 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
PDGFRB-208ENST00000520851 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
PDGFRB-208ENST00000520851 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
PDGFRB-208ENST00000520851 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
PDGFRB-208ENST00000520851 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
PDGFRB-208ENST00000520851 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
PDGFRB-208ENST00000520851 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
PDGFRB-208ENST00000520851 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
PDGFRB-208ENST00000520851 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
PDGFRB-208ENST00000520851 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
PDGFRB-208ENST00000520851 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
PDGFRB-208ENST00000520851 ZBTB22O15209 634 aa13.01□□□□□ -0.33
PDGFRB-208ENST00000520851 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
PDGFRB-208ENST00000520851 PLCH2O75038 1416 aa13□□□□□ -0.33
PDGFRB-208ENST00000520851 KANK4Q5T7N3 995 aaPredicted RBP13□□□□□ -0.33
PDGFRB-208ENST00000520851 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
PDGFRB-208ENST00000520851 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
PDGFRB-208ENST00000520851 NEO1Q92859 1461 aa12.98□□□□□ -0.33
PDGFRB-208ENST00000520851 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
PDGFRB-208ENST00000520851 FANCAO15360 1455 aa12.97□□□□□ -0.33
PDGFRB-208ENST00000520851 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
PDGFRB-208ENST00000520851 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
PDGFRB-208ENST00000520851 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
PDGFRB-208ENST00000520851 EFCAB2Q5VUJ9 269 aa12.95□□□□□ -0.34
PDGFRB-208ENST00000520851 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
PDGFRB-208ENST00000520851 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
PDGFRB-208ENST00000520851 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
PDGFRB-208ENST00000520851 SAMD9LQ8IVG5 1584 aa12.93□□□□□ -0.34
PDGFRB-208ENST00000520851 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
PDGFRB-208ENST00000520851 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
PDGFRB-208ENST00000520851 ABCC1P33527 1531 aa12.92□□□□□ -0.34
PDGFRB-208ENST00000520851 KDM6BO15054 1643 aa12.91□□□□□ -0.34
PDGFRB-208ENST00000520851 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
PDGFRB-208ENST00000520851 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
PDGFRB-208ENST00000520851 CROCC2H7BZ55 1655 aa12.9□□□□□ -0.34
PDGFRB-208ENST00000520851 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
PDGFRB-208ENST00000520851 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
PDGFRB-208ENST00000520851 ARHGEF5Q12774 1597 aa12.89□□□□□ -0.35
PDGFRB-208ENST00000520851 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
PDGFRB-208ENST00000520851 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
PDGFRB-208ENST00000520851 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
PDGFRB-208ENST00000520851 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
PDGFRB-208ENST00000520851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDGFRB-208ENST00000520851 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
PDGFRB-208ENST00000520851 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
PDGFRB-208ENST00000520851 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
PDGFRB-208ENST00000520851 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-208ENST00000520851 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
PDGFRB-208ENST00000520851 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
PDGFRB-208ENST00000520851 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-208ENST00000520851 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
PDGFRB-208ENST00000520851 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-208ENST00000520851 KDM5CP41229 1560 aa12.85□□□□□ -0.35
PDGFRB-208ENST00000520851 HECW2Q9P2P5 1572 aa12.84□□□□□ -0.35
PDGFRB-208ENST00000520851 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.35
PDGFRB-208ENST00000520851 CCDC141Q6ZP82 1450 aa12.83□□□□□ -0.36
PDGFRB-208ENST00000520851 FRMPD1Q5SYB0 1578 aa12.82□□□□□ -0.36
PDGFRB-208ENST00000520851 MAST1Q9Y2H9 1570 aa12.82□□□□□ -0.36
PDGFRB-208ENST00000520851 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
PDGFRB-208ENST00000520851 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
PDGFRB-208ENST00000520851 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
PDGFRB-208ENST00000520851 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
PDGFRB-208ENST00000520851 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
PDGFRB-208ENST00000520851 SHANK2Q9UPX8 1470 aa12.8□□□□□ -0.36
PDGFRB-208ENST00000520851 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
PDGFRB-208ENST00000520851 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
PDGFRB-208ENST00000520851 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 RTEL1-TNFRSF6BF6WH68 1400 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 DAPK1P53355 1430 aa12.78□□□□□ -0.36
PDGFRB-208ENST00000520851 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.37
PDGFRB-208ENST00000520851 ZFYVE16Q7Z3T8 1539 aa12.77□□□□□ -0.37
PDGFRB-208ENST00000520851 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
PDGFRB-208ENST00000520851 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
PDGFRB-208ENST00000520851 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 REREQ9P2R6 1566 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 ABCC5O15440 1437 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 RAPGEF3O95398 923 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
PDGFRB-208ENST00000520851 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
PDGFRB-208ENST00000520851 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
PDGFRB-208ENST00000520851 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
PDGFRB-208ENST00000520851 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
PDGFRB-208ENST00000520851 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
PDGFRB-208ENST00000520851 BCORL1Q5H9F3 1711 aa12.72□□□□□ -0.37
PDGFRB-208ENST00000520851 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
PDGFRB-208ENST00000520851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDGFRB-208ENST00000520851 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms