RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 ARAP3Q8WWN8 1544 aa24.05■■□□□ 1.44
SNHG6-201ENST00000520348 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
SNHG6-201ENST00000520348 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
SNHG6-201ENST00000520348 ABCC5O15440 1437 aa24.03■■□□□ 1.44
SNHG6-201ENST00000520348 GCC2Q8IWJ2 1684 aa24.03■■□□□ 1.44
SNHG6-201ENST00000520348 RAB3GAP2Q9H2M9 1393 aa24.03■■□□□ 1.44
SNHG6-201ENST00000520348 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
SNHG6-201ENST00000520348 ITGAEP38570 1179 aa24.02■■□□□ 1.44
SNHG6-201ENST00000520348 ARHGEF5Q12774 1597 aa24.01■■□□□ 1.43
SNHG6-201ENST00000520348 SAMD9LQ8IVG5 1584 aa24■■□□□ 1.43
SNHG6-201ENST00000520348 ROCK1Q13464 1354 aa24■■□□□ 1.43
SNHG6-201ENST00000520348 NAIPQ13075 1403 aa24■■□□□ 1.43
SNHG6-201ENST00000520348 ABCA9Q8IUA7 1624 aa23.99■■□□□ 1.43
SNHG6-201ENST00000520348 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
SNHG6-201ENST00000520348 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
SNHG6-201ENST00000520348 SHANK2Q9UPX8 1470 aa23.99■■□□□ 1.43
SNHG6-201ENST00000520348 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
SNHG6-201ENST00000520348 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
SNHG6-201ENST00000520348 PLCH2O75038 1416 aa23.97■■□□□ 1.43
SNHG6-201ENST00000520348 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
SNHG6-201ENST00000520348 DHX57Q6P158 1386 aaKnown RBP23.97■■□□□ 1.43
SNHG6-201ENST00000520348 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
SNHG6-201ENST00000520348 ADGBQ8N7X0 1667 aa23.94■■□□□ 1.42
SNHG6-201ENST00000520348 MAPKBP1O60336 1514 aa23.94■■□□□ 1.42
SNHG6-201ENST00000520348 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
SNHG6-201ENST00000520348 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
SNHG6-201ENST00000520348 ARHGAP5Q13017 1502 aa23.92■■□□□ 1.42
SNHG6-201ENST00000520348 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
SNHG6-201ENST00000520348 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
SNHG6-201ENST00000520348 ABCC1P33527 1531 aa23.87■■□□□ 1.41
SNHG6-201ENST00000520348 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
SNHG6-201ENST00000520348 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
SNHG6-201ENST00000520348 SYCP2Q9BX26 1530 aa23.84■■□□□ 1.41
SNHG6-201ENST00000520348 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
SNHG6-201ENST00000520348 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
SNHG6-201ENST00000520348 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
SNHG6-201ENST00000520348 ZNF777Q9ULD5 760 aaPredicted RBP23.83■■□□□ 1.41
SNHG6-201ENST00000520348 C9orf84Q5VXU9 1444 aa23.82■■□□□ 1.4
SNHG6-201ENST00000520348 KDM6BO15054 1643 aa23.81■■□□□ 1.4
SNHG6-201ENST00000520348 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
SNHG6-201ENST00000520348 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
SNHG6-201ENST00000520348 EFCAB2Q5VUJ9 269 aa23.79■■□□□ 1.4
SNHG6-201ENST00000520348 GLI2P10070 1586 aa23.78■■□□□ 1.4
SNHG6-201ENST00000520348 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
SNHG6-201ENST00000520348 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
SNHG6-201ENST00000520348 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
SNHG6-201ENST00000520348 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
SNHG6-201ENST00000520348 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
SNHG6-201ENST00000520348 FANCAO15360 1455 aa23.75■■□□□ 1.39
SNHG6-201ENST00000520348 CFAP74Q9C0B2 1584 aa23.74■■□□□ 1.39
SNHG6-201ENST00000520348 HNRNPMP52272 730 aaKnown RBP eCLIP23.72■■□□□ 1.39
SNHG6-201ENST00000520348 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
SNHG6-201ENST00000520348 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
SNHG6-201ENST00000520348 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
SNHG6-201ENST00000520348 CD109Q6YHK3 1445 aa23.67■■□□□ 1.38
SNHG6-201ENST00000520348 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
SNHG6-201ENST00000520348 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
SNHG6-201ENST00000520348 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
SNHG6-201ENST00000520348 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
SNHG6-201ENST00000520348 ANKRD50Q9ULJ7 1429 aa23.66■■□□□ 1.38
SNHG6-201ENST00000520348 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
SNHG6-201ENST00000520348 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.38
SNHG6-201ENST00000520348 ADGRL1O94910 1474 aa23.64■■□□□ 1.38
SNHG6-201ENST00000520348 NEO1Q92859 1461 aa23.64■■□□□ 1.38
SNHG6-201ENST00000520348 INO80Q9ULG1 1556 aaPredicted RBP23.64■■□□□ 1.37
SNHG6-201ENST00000520348 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.37
SNHG6-201ENST00000520348 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
SNHG6-201ENST00000520348 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
SNHG6-201ENST00000520348 KDM5CP41229 1560 aa23.58■■□□□ 1.37
SNHG6-201ENST00000520348 PZPP20742 1482 aa23.58■■□□□ 1.37
SNHG6-201ENST00000520348 UNC13BO14795 1591 aa23.57■■□□□ 1.36
SNHG6-201ENST00000520348 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
SNHG6-201ENST00000520348 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
SNHG6-201ENST00000520348 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
SNHG6-201ENST00000520348 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
SNHG6-201ENST00000520348 MAGI2Q86UL8 1455 aa23.54■■□□□ 1.36
SNHG6-201ENST00000520348 PPRC1Q5VV67 1664 aaKnown RBP23.51■■□□□ 1.35
SNHG6-201ENST00000520348 SPAG9O60271 1321 aaKnown RBP23.5■■□□□ 1.35
SNHG6-201ENST00000520348 MPHOSPH9Q99550 1183 aa23.49■■□□□ 1.35
SNHG6-201ENST00000520348 MLH3Q9UHC1 1453 aa23.49■■□□□ 1.35
SNHG6-201ENST00000520348 KIDINS220Q9ULH0 1771 aa23.48■■□□□ 1.35
SNHG6-201ENST00000520348 AFAP1Q8N556 730 aa23.47■■□□□ 1.35
SNHG6-201ENST00000520348 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
SNHG6-201ENST00000520348 TIMELESSQ9UNS1 1208 aa23.47■■□□□ 1.35
SNHG6-201ENST00000520348 KIF13AQ9H1H9 1805 aa23.46■■□□□ 1.35
SNHG6-201ENST00000520348 EIF2AK4Q9P2K8 1649 aaKnown RBP23.45■■□□□ 1.34
SNHG6-201ENST00000520348 HECW2Q9P2P5 1572 aa23.45■■□□□ 1.34
SNHG6-201ENST00000520348 RICTORQ6R327 1708 aa23.45■■□□□ 1.34
SNHG6-201ENST00000520348 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
SNHG6-201ENST00000520348 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
SNHG6-201ENST00000520348 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
SNHG6-201ENST00000520348 ANKRD30BQ9BXX2 1392 aa23.42■■□□□ 1.34
SNHG6-201ENST00000520348 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
SNHG6-201ENST00000520348 FRMPD1Q5SYB0 1578 aa23.4■■□□□ 1.34
SNHG6-201ENST00000520348 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
SNHG6-201ENST00000520348 NUP155O75694 1391 aa23.4■■□□□ 1.34
SNHG6-201ENST00000520348 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.34
SNHG6-201ENST00000520348 SIN3AQ96ST3 1273 aa23.38■■□□□ 1.33
SNHG6-201ENST00000520348 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
SNHG6-201ENST00000520348 BCORL1Q5H9F3 1711 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms