RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KIF27Q86VH2 1401 aa8.78□□□□□ -1
SDCBP-207ENST00000520168 MAGI3Q5TCQ9 1506 aa8.76□□□□□ -1.01
SDCBP-207ENST00000520168 WDR7Q9Y4E6 1490 aa8.76□□□□□ -1.01
SDCBP-207ENST00000520168 IGF1RP08069 1367 aa8.75□□□□□ -1.01
SDCBP-207ENST00000520168 CHADLQ6NUI6 762 aa8.74□□□□□ -1.01
SDCBP-207ENST00000520168 CSRNP3Q8WYN3 585 aa8.74□□□□□ -1.01
SDCBP-207ENST00000520168 ADAMTSL3P82987 1691 aa8.74□□□□□ -1.01
SDCBP-207ENST00000520168 KIAA0556O60303 1618 aa8.73□□□□□ -1.01
SDCBP-207ENST00000520168 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
SDCBP-207ENST00000520168 DISP1Q96F81 1524 aa8.73□□□□□ -1.01
SDCBP-207ENST00000520168 UGGT2Q9NYU1 1516 aa8.73□□□□□ -1.01
SDCBP-207ENST00000520168 PCF11O94913 1555 aaKnown RBP8.72□□□□□ -1.01
SDCBP-207ENST00000520168 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.02
SDCBP-207ENST00000520168 CD109Q6YHK3 1445 aa8.71□□□□□ -1.02
SDCBP-207ENST00000520168 PTPRMP28827 1452 aa8.7□□□□□ -1.02
SDCBP-207ENST00000520168 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
SDCBP-207ENST00000520168 BCORL1Q5H9F3 1711 aa8.7□□□□□ -1.02
SDCBP-207ENST00000520168 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-207ENST00000520168 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
SDCBP-207ENST00000520168 GABBR2O75899 941 aa8.69□□□□□ -1.02
SDCBP-207ENST00000520168 PHLDB1Q86UU1 1377 aa8.68□□□□□ -1.02
SDCBP-207ENST00000520168 MADDQ8WXG6 1647 aa8.66□□□□□ -1.02
SDCBP-207ENST00000520168 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.02
SDCBP-207ENST00000520168 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
SDCBP-207ENST00000520168 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
SDCBP-207ENST00000520168 ABCA8O94911 1581 aa8.65□□□□□ -1.03
SDCBP-207ENST00000520168 RAPGEF2Q9Y4G8 1499 aa8.64□□□□□ -1.03
SDCBP-207ENST00000520168 RIMS1Q86UR5 1692 aaKnown RBP8.64□□□□□ -1.03
SDCBP-207ENST00000520168 SOCS7O14512 581 aa8.63□□□□□ -1.03
SDCBP-207ENST00000520168 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-207ENST00000520168 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
SDCBP-207ENST00000520168 NEO1Q92859 1461 aa8.62□□□□□ -1.03
SDCBP-207ENST00000520168 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
SDCBP-207ENST00000520168 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
SDCBP-207ENST00000520168 EHMT2Q96KQ7 1210 aa8.6□□□□□ -1.03
SDCBP-207ENST00000520168 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
SDCBP-207ENST00000520168 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
SDCBP-207ENST00000520168 FER1L4A9Z1Z3 1794 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 CLCN6P51797 869 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 FAM9AQ8IZU1 332 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-207ENST00000520168 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 DISP3Q9P2K9 1392 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
SDCBP-207ENST00000520168 POGZQ7Z3K3 1410 aa8.58□□□□□ -1.04
SDCBP-207ENST00000520168 CERKQ8TCT0 537 aa8.58□□□□□ -1.04
SDCBP-207ENST00000520168 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
SDCBP-207ENST00000520168 FANCAO15360 1455 aa8.57□□□□□ -1.04
SDCBP-207ENST00000520168 TTC37Q6PGP7 1564 aa8.57□□□□□ -1.04
SDCBP-207ENST00000520168 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-207ENST00000520168 LHX8Q68G74 356 aa8.55□□□□□ -1.04
SDCBP-207ENST00000520168 EFCAB5A4FU69 1503 aa8.54□□□□□ -1.04
SDCBP-207ENST00000520168 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
SDCBP-207ENST00000520168 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
SDCBP-207ENST00000520168 RAPGEF6Q8TEU7 1601 aa8.53□□□□□ -1.04
SDCBP-207ENST00000520168 AKNAQ7Z591 1439 aa8.53□□□□□ -1.04
SDCBP-207ENST00000520168 ATP10BO94823 1461 aa8.52□□□□□ -1.05
SDCBP-207ENST00000520168 MAGI2Q86UL8 1455 aa8.52□□□□□ -1.05
SDCBP-207ENST00000520168 SETD1BQ9UPS6 1966 aaKnown RBP8.52□□□□□ -1.05
SDCBP-207ENST00000520168 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
SDCBP-207ENST00000520168 STRCQ7RTU9 1775 aa8.52□□□□□ -1.05
SDCBP-207ENST00000520168 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-207ENST00000520168 IQSEC2Q5JU85 1478 aa8.51□□□□□ -1.05
SDCBP-207ENST00000520168 ZFYVE16Q7Z3T8 1539 aa8.51□□□□□ -1.05
SDCBP-207ENST00000520168 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
SDCBP-207ENST00000520168 FHOD3Q2V2M9 1422 aa8.51□□□□□ -1.05
SDCBP-207ENST00000520168 HSPA2P54652 639 aa8.5□□□□□ -1.05
SDCBP-207ENST00000520168 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
SDCBP-207ENST00000520168 YEATS2Q9ULM3 1422 aa8.5□□□□□ -1.05
SDCBP-207ENST00000520168 SIGLEC1Q9BZZ2 1709 aa8.49□□□□□ -1.05
SDCBP-207ENST00000520168 SAMD9Q5K651 1589 aa8.49□□□□□ -1.05
SDCBP-207ENST00000520168 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
SDCBP-207ENST00000520168 ZNF579Q8NAF0 562 aaKnown RBP8.48□□□□□ -1.05
SDCBP-207ENST00000520168 ARHGEF12Q9NZN5 1544 aa8.48□□□□□ -1.05
SDCBP-207ENST00000520168 ZRANB1Q9UGI0 708 aa8.47□□□□□ -1.05
SDCBP-207ENST00000520168 HECW1Q76N89 1606 aa8.46□□□□□ -1.06
SDCBP-207ENST00000520168 PTPRTO14522 1441 aa8.46□□□□□ -1.06
SDCBP-207ENST00000520168 UHRF1BP1Q6BDS2 1440 aa8.46□□□□□ -1.06
SDCBP-207ENST00000520168 DCBLD2Q96PD2 775 aa8.45□□□□□ -1.06
SDCBP-207ENST00000520168 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
SDCBP-207ENST00000520168 C9orf84Q5VXU9 1444 aa8.44□□□□□ -1.06
SDCBP-207ENST00000520168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
SDCBP-207ENST00000520168 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
SDCBP-207ENST00000520168 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
SDCBP-207ENST00000520168 ATP10AO60312 1499 aa8.42□□□□□ -1.06
SDCBP-207ENST00000520168 LTBP4Q8N2S1 1624 aa8.42□□□□□ -1.06
SDCBP-207ENST00000520168 C3P01024 1663 aa8.42□□□□□ -1.06
SDCBP-207ENST00000520168 REREQ9P2R6 1566 aa8.41□□□□□ -1.06
SDCBP-207ENST00000520168 ARID3CA6NKF2 412 aa8.41□□□□□ -1.06
SDCBP-207ENST00000520168 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
SDCBP-207ENST00000520168 PAK3O75914 559 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-207ENST00000520168 SUPT6HQ7KZ85 1726 aaKnown RBP8.39□□□□□ -1.07
SDCBP-207ENST00000520168 KDM5CP41229 1560 aa8.39□□□□□ -1.07
SDCBP-207ENST00000520168 ZNF518AQ6AHZ1 1483 aa8.38□□□□□ -1.07
SDCBP-207ENST00000520168 MLECQ14165 292 aa8.38□□□□□ -1.07
SDCBP-207ENST00000520168 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
SDCBP-207ENST00000520168 PLCH2O75038 1416 aa8.37□□□□□ -1.07
SDCBP-207ENST00000520168 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
SDCBP-207ENST00000520168 AGLP35573 1532 aa8.36□□□□□ -1.07
SDCBP-207ENST00000520168 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms