RNA–Protein interactions for RNA: ENST00000519662.5

HMBOX1-207, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-207ENST00000519662 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
HMBOX1-207ENST00000519662 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
HMBOX1-207ENST00000519662 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
HMBOX1-207ENST00000519662 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
HMBOX1-207ENST00000519662 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
HMBOX1-207ENST00000519662 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
HMBOX1-207ENST00000519662 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
HMBOX1-207ENST00000519662 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
HMBOX1-207ENST00000519662 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
HMBOX1-207ENST00000519662 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
HMBOX1-207ENST00000519662 MAGI2Q86UL8 1455 aa17.33■□□□□ 0.37
HMBOX1-207ENST00000519662 ABCC1P33527 1531 aa17.32■□□□□ 0.36
HMBOX1-207ENST00000519662 POGZQ7Z3K3 1410 aa17.32■□□□□ 0.36
HMBOX1-207ENST00000519662 KDM5CP41229 1560 aa17.32■□□□□ 0.36
HMBOX1-207ENST00000519662 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
HMBOX1-207ENST00000519662 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
HMBOX1-207ENST00000519662 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
HMBOX1-207ENST00000519662 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
HMBOX1-207ENST00000519662 ZNF518AQ6AHZ1 1483 aa17.3■□□□□ 0.36
HMBOX1-207ENST00000519662 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
HMBOX1-207ENST00000519662 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
HMBOX1-207ENST00000519662 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
HMBOX1-207ENST00000519662 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
HMBOX1-207ENST00000519662 KIAA1107Q9UPP5 1409 aa17.26■□□□□ 0.35
HMBOX1-207ENST00000519662 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
HMBOX1-207ENST00000519662 HECW2Q9P2P5 1572 aa17.25■□□□□ 0.35
HMBOX1-207ENST00000519662 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
HMBOX1-207ENST00000519662 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
HMBOX1-207ENST00000519662 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
HMBOX1-207ENST00000519662 REREQ9P2R6 1566 aa17.21■□□□□ 0.35
HMBOX1-207ENST00000519662 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-207ENST00000519662 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.34
HMBOX1-207ENST00000519662 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
HMBOX1-207ENST00000519662 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
HMBOX1-207ENST00000519662 APLP2Q06481 763 aa17.19■□□□□ 0.34
HMBOX1-207ENST00000519662 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
HMBOX1-207ENST00000519662 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
HMBOX1-207ENST00000519662 KDM4FA0A1W2PPD8 638 aa17.18■□□□□ 0.34
HMBOX1-207ENST00000519662 ATP10AO60312 1499 aa17.18■□□□□ 0.34
HMBOX1-207ENST00000519662 KANK4Q5T7N3 995 aaPredicted RBP17.17■□□□□ 0.34
HMBOX1-207ENST00000519662 SIGLEC1Q9BZZ2 1709 aa17.17■□□□□ 0.34
HMBOX1-207ENST00000519662 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
HMBOX1-207ENST00000519662 ABCA6Q8N139 1617 aa17.17■□□□□ 0.34
HMBOX1-207ENST00000519662 INO80Q9ULG1 1556 aaPredicted RBP17.16■□□□□ 0.34
HMBOX1-207ENST00000519662 MIA2Q96PC5 1412 aa17.16■□□□□ 0.34
HMBOX1-207ENST00000519662 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
HMBOX1-207ENST00000519662 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
HMBOX1-207ENST00000519662 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
HMBOX1-207ENST00000519662 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
HMBOX1-207ENST00000519662 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
HMBOX1-207ENST00000519662 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
HMBOX1-207ENST00000519662 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
HMBOX1-207ENST00000519662 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
HMBOX1-207ENST00000519662 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
HMBOX1-207ENST00000519662 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
HMBOX1-207ENST00000519662 AGLP35573 1532 aa17.11■□□□□ 0.33
HMBOX1-207ENST00000519662 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.339e-9■■■■■ 30.5
HMBOX1-207ENST00000519662 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
HMBOX1-207ENST00000519662 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-207ENST00000519662 CCDC141Q6ZP82 1450 aa17.09■□□□□ 0.33
HMBOX1-207ENST00000519662 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
HMBOX1-207ENST00000519662 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
HMBOX1-207ENST00000519662 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
HMBOX1-207ENST00000519662 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
HMBOX1-207ENST00000519662 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
HMBOX1-207ENST00000519662 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
HMBOX1-207ENST00000519662 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
HMBOX1-207ENST00000519662 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
HMBOX1-207ENST00000519662 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
HMBOX1-207ENST00000519662 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
HMBOX1-207ENST00000519662 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
HMBOX1-207ENST00000519662 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.32
HMBOX1-207ENST00000519662 PTPRMP28827 1452 aa17.01■□□□□ 0.31
HMBOX1-207ENST00000519662 DNMT1P26358 1616 aaKnown RBP17.01■□□□□ 0.31
HMBOX1-207ENST00000519662 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
HMBOX1-207ENST00000519662 A2MP01023 1474 aa17■□□□□ 0.31
HMBOX1-207ENST00000519662 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
HMBOX1-207ENST00000519662 MROH2AA6NES4 1674 aa16.98■□□□□ 0.31
HMBOX1-207ENST00000519662 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
HMBOX1-207ENST00000519662 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
HMBOX1-207ENST00000519662 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
HMBOX1-207ENST00000519662 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
HMBOX1-207ENST00000519662 FAM135AQ9P2D6 1515 aa16.95■□□□□ 0.3
HMBOX1-207ENST00000519662 ABCC5O15440 1437 aa16.93■□□□□ 0.3
HMBOX1-207ENST00000519662 CNTLNQ9NXG0 1405 aa16.93■□□□□ 0.3
HMBOX1-207ENST00000519662 C3P01024 1663 aa16.92■□□□□ 0.3
HMBOX1-207ENST00000519662 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
HMBOX1-207ENST00000519662 DAPK1P53355 1430 aa16.92■□□□□ 0.3
HMBOX1-207ENST00000519662 RNF17Q9BXT8 1623 aaKnown RBP16.91■□□□□ 0.3
HMBOX1-207ENST00000519662 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
HMBOX1-207ENST00000519662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
HMBOX1-207ENST00000519662 MLECQ14165 292 aa16.89■□□□□ 0.29
HMBOX1-207ENST00000519662 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
HMBOX1-207ENST00000519662 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
HMBOX1-207ENST00000519662 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
HMBOX1-207ENST00000519662 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
HMBOX1-207ENST00000519662 ERBINQ96RT1 1412 aa16.84■□□□□ 0.29
HMBOX1-207ENST00000519662 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
HMBOX1-207ENST00000519662 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
HMBOX1-207ENST00000519662 ANKRD30AQ9BXX3 1397 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms