RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
CDKL3-203ENST00000519312 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
CDKL3-203ENST00000519312 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
CDKL3-203ENST00000519312 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
CDKL3-203ENST00000519312 CUL7Q14999 1698 aa13.69□□□□□ -0.22
CDKL3-203ENST00000519312 KIF12Q96FN5 646 aa13.68□□□□□ -0.22
CDKL3-203ENST00000519312 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
CDKL3-203ENST00000519312 FAM69CQ0P6D2 419 aa13.66□□□□□ -0.22
CDKL3-203ENST00000519312 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
CDKL3-203ENST00000519312 KDM6BO15054 1643 aa13.64□□□□□ -0.23
CDKL3-203ENST00000519312 IGF1RP08069 1367 aa13.64□□□□□ -0.23
CDKL3-203ENST00000519312 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
CDKL3-203ENST00000519312 MAP3K13O43283 966 aa13.62□□□□□ -0.23
CDKL3-203ENST00000519312 GLI2P10070 1586 aa13.58□□□□□ -0.23
CDKL3-203ENST00000519312 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
CDKL3-203ENST00000519312 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
CDKL3-203ENST00000519312 ABCC2Q92887 1545 aa13.58□□□□□ -0.24
CDKL3-203ENST00000519312 UHRF1BP1LA0JNW5 1464 aa13.57□□□□□ -0.24
CDKL3-203ENST00000519312 PTPRGP23470 1445 aa13.56□□□□□ -0.24
CDKL3-203ENST00000519312 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
CDKL3-203ENST00000519312 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
CDKL3-203ENST00000519312 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
CDKL3-203ENST00000519312 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
CDKL3-203ENST00000519312 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
CDKL3-203ENST00000519312 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
CDKL3-203ENST00000519312 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
CDKL3-203ENST00000519312 LHX8Q68G74 356 aa13.53□□□□□ -0.24
CDKL3-203ENST00000519312 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
CDKL3-203ENST00000519312 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
CDKL3-203ENST00000519312 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
CDKL3-203ENST00000519312 ASXL2Q76L83 1435 aa13.52□□□□□ -0.25
CDKL3-203ENST00000519312 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
CDKL3-203ENST00000519312 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
CDKL3-203ENST00000519312 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
CDKL3-203ENST00000519312 DISP1Q96F81 1524 aa13.49□□□□□ -0.25
CDKL3-203ENST00000519312 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
CDKL3-203ENST00000519312 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
CDKL3-203ENST00000519312 PYGBP11216 843 aa13.49□□□□□ -0.25
CDKL3-203ENST00000519312 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
CDKL3-203ENST00000519312 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
CDKL3-203ENST00000519312 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
CDKL3-203ENST00000519312 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
CDKL3-203ENST00000519312 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CDKL3-203ENST00000519312 EPRSP07814 1512 aaKnown RBP13.46□□□□□ -0.25
CDKL3-203ENST00000519312 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
CDKL3-203ENST00000519312 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
CDKL3-203ENST00000519312 GSE1Q14687 1217 aa13.45□□□□□ -0.26
CDKL3-203ENST00000519312 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
CDKL3-203ENST00000519312 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
CDKL3-203ENST00000519312 TIE1P35590 1138 aa13.43□□□□□ -0.26
CDKL3-203ENST00000519312 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
CDKL3-203ENST00000519312 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
CDKL3-203ENST00000519312 ZCCHC11Q5TAX3 1644 aaKnown RBP13.42□□□□□ -0.26
CDKL3-203ENST00000519312 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
CDKL3-203ENST00000519312 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
CDKL3-203ENST00000519312 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
CDKL3-203ENST00000519312 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
CDKL3-203ENST00000519312 SLC39A7Q92504 469 aa13.38□□□□□ -0.27
CDKL3-203ENST00000519312 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
CDKL3-203ENST00000519312 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
CDKL3-203ENST00000519312 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
CDKL3-203ENST00000519312 C7P10643 843 aa13.36□□□□□ -0.27
CDKL3-203ENST00000519312 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
CDKL3-203ENST00000519312 ABCA8O94911 1581 aa13.33□□□□□ -0.28
CDKL3-203ENST00000519312 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
CDKL3-203ENST00000519312 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
CDKL3-203ENST00000519312 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
CDKL3-203ENST00000519312 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
CDKL3-203ENST00000519312 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
CDKL3-203ENST00000519312 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
CDKL3-203ENST00000519312 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
CDKL3-203ENST00000519312 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
CDKL3-203ENST00000519312 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
CDKL3-203ENST00000519312 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
CDKL3-203ENST00000519312 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
CDKL3-203ENST00000519312 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
CDKL3-203ENST00000519312 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
CDKL3-203ENST00000519312 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
CDKL3-203ENST00000519312 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
CDKL3-203ENST00000519312 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
CDKL3-203ENST00000519312 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
CDKL3-203ENST00000519312 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
CDKL3-203ENST00000519312 IER5LQ5T953 404 aa13.2□□□□□ -0.3
CDKL3-203ENST00000519312 KIF21BO75037 1637 aa13.2□□□□□ -0.3
CDKL3-203ENST00000519312 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
CDKL3-203ENST00000519312 SEC24BO95487 1268 aa13.19□□□□□ -0.3
CDKL3-203ENST00000519312 ATP10BO94823 1461 aa13.17□□□□□ -0.3
CDKL3-203ENST00000519312 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
CDKL3-203ENST00000519312 ADAMTSL3P82987 1691 aa13.16□□□□□ -0.3
CDKL3-203ENST00000519312 PSEN1P49768 467 aa13.16□□□□□ -0.3
CDKL3-203ENST00000519312 NEO1Q92859 1461 aa13.16□□□□□ -0.3
CDKL3-203ENST00000519312 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
CDKL3-203ENST00000519312 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
CDKL3-203ENST00000519312 PTPRMP28827 1452 aa13.12□□□□□ -0.31
CDKL3-203ENST00000519312 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
CDKL3-203ENST00000519312 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
CDKL3-203ENST00000519312 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-203ENST00000519312 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
CDKL3-203ENST00000519312 PLCG2P16885 1265 aa13.09□□□□□ -0.31
CDKL3-203ENST00000519312 FAM9AQ8IZU1 332 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms