RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 PKD2Q13563 968 aa11.04□□□□□ -0.64
PCM1-212ENST00000519253 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 CASKIN1Q8WXD9 1431 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
PCM1-212ENST00000519253 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 ARXQ96QS3 562 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 GSE1Q14687 1217 aa11.03□□□□□ -0.64
PCM1-212ENST00000519253 KIF7Q2M1P5 1343 aa11.02□□□□□ -0.64
PCM1-212ENST00000519253 DCAF11Q8TEB1 546 aa11.02□□□□□ -0.64
PCM1-212ENST00000519253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.641e-7■■□□□ 13.6
PCM1-212ENST00000519253 HFM1A2PYH4 1435 aa11.02□□□□□ -0.65
PCM1-212ENST00000519253 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
PCM1-212ENST00000519253 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
PCM1-212ENST00000519253 TMF1P82094 1093 aa11.01□□□□□ -0.65
PCM1-212ENST00000519253 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
PCM1-212ENST00000519253 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
PCM1-212ENST00000519253 CUX1P39880 1505 aa11.01□□□□□ -0.65
PCM1-212ENST00000519253 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
PCM1-212ENST00000519253 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
PCM1-212ENST00000519253 SMG6Q86US8 1419 aaKnown RBP10.99□□□□□ -0.65
PCM1-212ENST00000519253 USP47Q96K76 1375 aa10.99□□□□□ -0.65
PCM1-212ENST00000519253 NAP1L5Q96NT1 182 aaPredicted RBP10.98□□□□□ -0.65
PCM1-212ENST00000519253 CENPQQ7L2Z9 268 aaPredicted RBP10.97□□□□□ -0.65
PCM1-212ENST00000519253 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
PCM1-212ENST00000519253 ANKRD30AQ9BXX3 1397 aa10.97□□□□□ -0.65
PCM1-212ENST00000519253 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
PCM1-212ENST00000519253 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
PCM1-212ENST00000519253 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
PCM1-212ENST00000519253 NCAPD3P42695 1498 aa10.96□□□□□ -0.65
PCM1-212ENST00000519253 FAM161AQ3B820 660 aa10.96□□□□□ -0.65
PCM1-212ENST00000519253 MAPKBP1O60336 1514 aa10.96□□□□□ -0.65
PCM1-212ENST00000519253 FGD5Q6ZNL6 1462 aa10.95□□□□□ -0.66
PCM1-212ENST00000519253 NUP155O75694 1391 aa10.95□□□□□ -0.66
PCM1-212ENST00000519253 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
PCM1-212ENST00000519253 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
PCM1-212ENST00000519253 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
PCM1-212ENST00000519253 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
PCM1-212ENST00000519253 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
PCM1-212ENST00000519253 ST20-MTHFSA0A0A6YYL1 179 aa10.93□□□□□ -0.66
PCM1-212ENST00000519253 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
PCM1-212ENST00000519253 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
PCM1-212ENST00000519253 CFTRP13569 1480 aa10.93□□□□□ -0.66
PCM1-212ENST00000519253 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
PCM1-212ENST00000519253 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
PCM1-212ENST00000519253 AKNAQ7Z591 1439 aa10.92□□□□□ -0.66
PCM1-212ENST00000519253 NAIPQ13075 1403 aa10.91□□□□□ -0.66
PCM1-212ENST00000519253 FRAT1Q92837 279 aaPredicted RBP10.91□□□□□ -0.66
PCM1-212ENST00000519253 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
PCM1-212ENST00000519253 CRBNQ96SW2 442 aa10.91□□□□□ -0.66
PCM1-212ENST00000519253 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.66
PCM1-212ENST00000519253 NFKBIBQ15653 356 aa10.9□□□□□ -0.66
PCM1-212ENST00000519253 FTSJ3Q8IY81 847 aaKnown RBP10.9□□□□□ -0.66
PCM1-212ENST00000519253 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
PCM1-212ENST00000519253 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
PCM1-212ENST00000519253 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
PCM1-212ENST00000519253 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
PCM1-212ENST00000519253 GOLGA6L3A6NEY3 463 aa10.88□□□□□ -0.67
PCM1-212ENST00000519253 PLIN1O60240 522 aa10.88□□□□□ -0.67
PCM1-212ENST00000519253 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
PCM1-212ENST00000519253 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■■■■■ 32.2
PCM1-212ENST00000519253 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
PCM1-212ENST00000519253 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
PCM1-212ENST00000519253 NBPF8Q3BBV2 869 aa10.88□□□□□ -0.67
PCM1-212ENST00000519253 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
PCM1-212ENST00000519253 PMFBP1Q8TBY8 1022 aa10.87□□□□□ -0.67
PCM1-212ENST00000519253 MYH16Q9H6N6 1097 aa10.87□□□□□ -0.67
PCM1-212ENST00000519253 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
PCM1-212ENST00000519253 RWDD1Q9H446 243 aaPredicted RBP10.86□□□□□ -0.67
PCM1-212ENST00000519253 PTMSP20962 102 aa10.86□□□□□ -0.67
PCM1-212ENST00000519253 NCOA1Q15788 1441 aa10.86□□□□□ -0.67
PCM1-212ENST00000519253 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
PCM1-212ENST00000519253 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
PCM1-212ENST00000519253 PRKCSHP14314 528 aaPredicted RBP10.85□□□□□ -0.67
PCM1-212ENST00000519253 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
PCM1-212ENST00000519253 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
PCM1-212ENST00000519253 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
PCM1-212ENST00000519253 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
PCM1-212ENST00000519253 EHBP1L1Q8N3D4 1523 aa10.84□□□□□ -0.67
PCM1-212ENST00000519253 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
PCM1-212ENST00000519253 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
PCM1-212ENST00000519253 PANK3Q9H999 370 aa10.83□□□□□ -0.68
PCM1-212ENST00000519253 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
PCM1-212ENST00000519253 RSPH4AQ5TD94 716 aa10.83□□□□□ -0.68
PCM1-212ENST00000519253 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
PCM1-212ENST00000519253 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
PCM1-212ENST00000519253 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
PCM1-212ENST00000519253 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
PCM1-212ENST00000519253 BRPF3Q9ULD4 1205 aa10.82□□□□□ -0.68
PCM1-212ENST00000519253 EIF3AQ14152 1382 aaKnown RBP10.81□□□□□ -0.68
PCM1-212ENST00000519253 E9PSI1 815 aa10.81□□□□□ -0.68
PCM1-212ENST00000519253 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
PCM1-212ENST00000519253 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
PCM1-212ENST00000519253 FAM43AQ8N2R8 423 aa10.8□□□□□ -0.68
PCM1-212ENST00000519253 NCLP19338 710 aaKnown RBP10.8□□□□□ -0.68
PCM1-212ENST00000519253 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
PCM1-212ENST00000519253 CCDC144AA2RUR9 1427 aa10.8□□□□□ -0.68
PCM1-212ENST00000519253 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
PCM1-212ENST00000519253 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
PCM1-212ENST00000519253 MSNP26038 577 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms