RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
PSD3-208ENST00000518963 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
PSD3-208ENST00000518963 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
PSD3-208ENST00000518963 DPY19L2Q6NUT2 758 aa9.64□□□□□ -0.87
PSD3-208ENST00000518963 HS3ST6Q96QI5 342 aa9.64□□□□□ -0.87
PSD3-208ENST00000518963 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
PSD3-208ENST00000518963 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
PSD3-208ENST00000518963 KDM2AQ9Y2K7 1162 aa9.63□□□□□ -0.87
PSD3-208ENST00000518963 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
PSD3-208ENST00000518963 CABP2Q9NPB3 220 aa9.61□□□□□ -0.87
PSD3-208ENST00000518963 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
PSD3-208ENST00000518963 HOXB3P14651 431 aaPredicted RBP9.59□□□□□ -0.87
PSD3-208ENST00000518963 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
PSD3-208ENST00000518963 MFRPQ9BY79 579 aa9.59□□□□□ -0.87
PSD3-208ENST00000518963 G3V3G9 751 aa9.58□□□□□ -0.88
PSD3-208ENST00000518963 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
PSD3-208ENST00000518963 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
PSD3-208ENST00000518963 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
PSD3-208ENST00000518963 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
PSD3-208ENST00000518963 PPP1R37O75864 691 aa9.52□□□□□ -0.89
PSD3-208ENST00000518963 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
PSD3-208ENST00000518963 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
PSD3-208ENST00000518963 SOX12O15370 315 aa9.49□□□□□ -0.89
PSD3-208ENST00000518963 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
PSD3-208ENST00000518963 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
PSD3-208ENST00000518963 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
PSD3-208ENST00000518963 NLRP6P59044 892 aa9.46□□□□□ -0.9
PSD3-208ENST00000518963 ERBB3P21860 1342 aa9.46□□□□□ -0.9
PSD3-208ENST00000518963 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
PSD3-208ENST00000518963 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
PSD3-208ENST00000518963 MICALL2Q8IY33 904 aa9.43□□□□□ -0.9
PSD3-208ENST00000518963 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
PSD3-208ENST00000518963 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
PSD3-208ENST00000518963 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
PSD3-208ENST00000518963 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
PSD3-208ENST00000518963 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
PSD3-208ENST00000518963 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
PSD3-208ENST00000518963 PTGER2P43116 358 aa9.31□□□□□ -0.92
PSD3-208ENST00000518963 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
PSD3-208ENST00000518963 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
PSD3-208ENST00000518963 BCANQ96GW7 911 aa9.28□□□□□ -0.92
PSD3-208ENST00000518963 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
PSD3-208ENST00000518963 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
PSD3-208ENST00000518963 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
PSD3-208ENST00000518963 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
PSD3-208ENST00000518963 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
PSD3-208ENST00000518963 ANKRD13DQ6ZTN6 518 aa9.21□□□□□ -0.94
PSD3-208ENST00000518963 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
PSD3-208ENST00000518963 KIF3CO14782 793 aa9.2□□□□□ -0.94
PSD3-208ENST00000518963 PDE4AP27815 886 aa9.2□□□□□ -0.94
PSD3-208ENST00000518963 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
PSD3-208ENST00000518963 MFSD10Q14728 455 aa9.19□□□□□ -0.94
PSD3-208ENST00000518963 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
PSD3-208ENST00000518963 GPHNQ9NQX3 736 aaPredicted RBP9.17□□□□□ -0.94
PSD3-208ENST00000518963 PBX2P40425 430 aa9.16□□□□□ -0.94
PSD3-208ENST00000518963 E2F4Q16254 413 aa9.16□□□□□ -0.94
PSD3-208ENST00000518963 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
PSD3-208ENST00000518963 SLC34A2O95436 690 aa9.15□□□□□ -0.94
PSD3-208ENST00000518963 NBR1Q14596 966 aa9.15□□□□□ -0.94
PSD3-208ENST00000518963 DSG2Q14126 1118 aa9.14□□□□□ -0.95
PSD3-208ENST00000518963 P3H3Q8IVL6 736 aa9.14□□□□□ -0.95
PSD3-208ENST00000518963 NUDT7P0C024 238 aa9.12□□□□□ -0.95
PSD3-208ENST00000518963 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
PSD3-208ENST00000518963 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
PSD3-208ENST00000518963 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
PSD3-208ENST00000518963 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
PSD3-208ENST00000518963 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
PSD3-208ENST00000518963 PCDHGA4Q9Y5G9 962 aa9.11□□□□□ -0.95
PSD3-208ENST00000518963 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
PSD3-208ENST00000518963 FOXK1P85037 733 aa9.09□□□□□ -0.95
PSD3-208ENST00000518963 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
PSD3-208ENST00000518963 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
PSD3-208ENST00000518963 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
PSD3-208ENST00000518963 AXIN2Q9Y2T1 843 aa9.06□□□□□ -0.96
PSD3-208ENST00000518963 SEMA3EO15041 775 aa9.05□□□□□ -0.96
PSD3-208ENST00000518963 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
PSD3-208ENST00000518963 HCSTQ9UBK5 93 aa9.04□□□□□ -0.96
PSD3-208ENST00000518963 ARIH1Q9Y4X5 557 aaPredicted RBP9.04□□□□□ -0.96
PSD3-208ENST00000518963 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
PSD3-208ENST00000518963 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
PSD3-208ENST00000518963 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
PSD3-208ENST00000518963 DPYSL4O14531 572 aa9.02□□□□□ -0.97
PSD3-208ENST00000518963 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
PSD3-208ENST00000518963 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
PSD3-208ENST00000518963 PTCD2Q8WV60 388 aaKnown RBP9□□□□□ -0.97
PSD3-208ENST00000518963 TESPA1A2RU30 521 aaPredicted RBP8.99□□□□□ -0.97
PSD3-208ENST00000518963 TK2O00142 265 aa8.99□□□□□ -0.97
PSD3-208ENST00000518963 HRO43593 1189 aa8.97□□□□□ -0.97
PSD3-208ENST00000518963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
PSD3-208ENST00000518963 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
PSD3-208ENST00000518963 MLLT3P42568 568 aaPredicted RBP8.96□□□□□ -0.98
PSD3-208ENST00000518963 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
PSD3-208ENST00000518963 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
PSD3-208ENST00000518963 PDIA6Q15084 440 aa8.93□□□□□ -0.98
PSD3-208ENST00000518963 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
PSD3-208ENST00000518963 PSEN2P49810 448 aa8.91□□□□□ -0.98
PSD3-208ENST00000518963 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
PSD3-208ENST00000518963 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
PSD3-208ENST00000518963 TBC1D12O60347 775 aa8.89□□□□□ -0.99
PSD3-208ENST00000518963 SPDYE16A6NNV3 312 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms