RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
VEGFA-219ENST00000518824 PREX2Q70Z35 1606 aa21.28■■□□□ 1
VEGFA-219ENST00000518824 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
VEGFA-219ENST00000518824 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
VEGFA-219ENST00000518824 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
VEGFA-219ENST00000518824 POGZQ7Z3K3 1410 aa21.23■□□□□ 0.99
VEGFA-219ENST00000518824 GPATCH8Q9UKJ3 1502 aaKnown RBP21.23■□□□□ 0.99
VEGFA-219ENST00000518824 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
VEGFA-219ENST00000518824 YEATS2Q9ULM3 1422 aa21.21■□□□□ 0.99
VEGFA-219ENST00000518824 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
VEGFA-219ENST00000518824 EHBP1L1Q8N3D4 1523 aa21.2■□□□□ 0.98
VEGFA-219ENST00000518824 TIAM1Q13009 1591 aa21.2■□□□□ 0.98
VEGFA-219ENST00000518824 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
VEGFA-219ENST00000518824 SIGLEC1Q9BZZ2 1709 aa21.19■□□□□ 0.98
VEGFA-219ENST00000518824 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
VEGFA-219ENST00000518824 ABCC1P33527 1531 aa21.18■□□□□ 0.98
VEGFA-219ENST00000518824 SAMD9LQ8IVG5 1584 aa21.18■□□□□ 0.98
VEGFA-219ENST00000518824 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
VEGFA-219ENST00000518824 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
VEGFA-219ENST00000518824 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
VEGFA-219ENST00000518824 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
VEGFA-219ENST00000518824 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
VEGFA-219ENST00000518824 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-219ENST00000518824 KDM5CP41229 1560 aa21.13■□□□□ 0.97
VEGFA-219ENST00000518824 ZNF518AQ6AHZ1 1483 aa21.12■□□□□ 0.97
VEGFA-219ENST00000518824 NCOA2Q15596 1464 aa21.11■□□□□ 0.97
VEGFA-219ENST00000518824 LRRC9Q6ZRR7 1453 aa21.11■□□□□ 0.97
VEGFA-219ENST00000518824 MAGI2Q86UL8 1455 aa21.11■□□□□ 0.97
VEGFA-219ENST00000518824 ZNF644Q9H582 1327 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-219ENST00000518824 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
VEGFA-219ENST00000518824 CFDP1Q9UEE9 299 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-219ENST00000518824 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
VEGFA-219ENST00000518824 HNRNPMP52272 730 aaKnown RBP eCLIP21.09■□□□□ 0.971e-12■■■■■ 34.3
VEGFA-219ENST00000518824 BCORL1Q5H9F3 1711 aa21.09■□□□□ 0.97
VEGFA-219ENST00000518824 ADAMTSL3P82987 1691 aa21.09■□□□□ 0.97
VEGFA-219ENST00000518824 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
VEGFA-219ENST00000518824 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
VEGFA-219ENST00000518824 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
VEGFA-219ENST00000518824 ABCA6Q8N139 1617 aa21.05■□□□□ 0.96
VEGFA-219ENST00000518824 DIP2CQ9Y2E4 1556 aa21.05■□□□□ 0.96
VEGFA-219ENST00000518824 ATP10AO60312 1499 aa21.04■□□□□ 0.96
VEGFA-219ENST00000518824 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
VEGFA-219ENST00000518824 MADDQ8WXG6 1647 aa21.04■□□□□ 0.96
VEGFA-219ENST00000518824 MLH3Q9UHC1 1453 aa21.03■□□□□ 0.96
VEGFA-219ENST00000518824 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
VEGFA-219ENST00000518824 C9orf84Q5VXU9 1444 aa21.01■□□□□ 0.95
VEGFA-219ENST00000518824 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
VEGFA-219ENST00000518824 MLECQ14165 292 aa21■□□□□ 0.95
VEGFA-219ENST00000518824 MBD5Q9P267 1494 aa21■□□□□ 0.95
VEGFA-219ENST00000518824 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
VEGFA-219ENST00000518824 RIMS1Q86UR5 1692 aaKnown RBP20.97■□□□□ 0.95
VEGFA-219ENST00000518824 PTPRMP28827 1452 aa20.97■□□□□ 0.95
VEGFA-219ENST00000518824 CAMSAP2Q08AD1 1489 aa20.97■□□□□ 0.95
VEGFA-219ENST00000518824 SPAG9O60271 1321 aaKnown RBP20.95■□□□□ 0.94
VEGFA-219ENST00000518824 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-219ENST00000518824 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
VEGFA-219ENST00000518824 APLP2Q06481 763 aa20.93■□□□□ 0.94
VEGFA-219ENST00000518824 REREQ9P2R6 1566 aa20.93■□□□□ 0.94
VEGFA-219ENST00000518824 FER1L4A9Z1Z3 1794 aa20.9■□□□□ 0.94
VEGFA-219ENST00000518824 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
VEGFA-219ENST00000518824 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
VEGFA-219ENST00000518824 AGLP35573 1532 aa20.87■□□□□ 0.93
VEGFA-219ENST00000518824 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
VEGFA-219ENST00000518824 ARHGEF5Q12774 1597 aa20.85■□□□□ 0.93
VEGFA-219ENST00000518824 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
VEGFA-219ENST00000518824 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
VEGFA-219ENST00000518824 A2MP01023 1474 aa20.83■□□□□ 0.93
VEGFA-219ENST00000518824 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.92
VEGFA-219ENST00000518824 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
VEGFA-219ENST00000518824 CEBPAP49715 358 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-219ENST00000518824 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
VEGFA-219ENST00000518824 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
VEGFA-219ENST00000518824 FGD6Q6ZV73 1430 aa20.78■□□□□ 0.92
VEGFA-219ENST00000518824 RSPH4AQ5TD94 716 aa20.76■□□□□ 0.91
VEGFA-219ENST00000518824 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
VEGFA-219ENST00000518824 MAST1Q9Y2H9 1570 aa20.74■□□□□ 0.91
VEGFA-219ENST00000518824 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
VEGFA-219ENST00000518824 C3P01024 1663 aa20.73■□□□□ 0.91
VEGFA-219ENST00000518824 ABCC5O15440 1437 aa20.73■□□□□ 0.91
VEGFA-219ENST00000518824 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
VEGFA-219ENST00000518824 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
VEGFA-219ENST00000518824 GGT6Q6P531 493 aa20.72■□□□□ 0.91
VEGFA-219ENST00000518824 LMTK3Q96Q04 1460 aa20.72■□□□□ 0.91
VEGFA-219ENST00000518824 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.91
VEGFA-219ENST00000518824 CLTCQ00610 1675 aaKnown RBP20.7■□□□□ 0.9
VEGFA-219ENST00000518824 DNMT1P26358 1616 aaKnown RBP20.69■□□□□ 0.9
VEGFA-219ENST00000518824 DAPK1P53355 1430 aa20.69■□□□□ 0.9
VEGFA-219ENST00000518824 KIF3BO15066 747 aa20.68■□□□□ 0.9
VEGFA-219ENST00000518824 HSPA2P54652 639 aa20.66■□□□□ 0.9
VEGFA-219ENST00000518824 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
VEGFA-219ENST00000518824 MROH2AA6NES4 1674 aa20.64■□□□□ 0.9
VEGFA-219ENST00000518824 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
VEGFA-219ENST00000518824 ZMYM3Q14202 1370 aa20.64■□□□□ 0.89
VEGFA-219ENST00000518824 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
VEGFA-219ENST00000518824 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
VEGFA-219ENST00000518824 SHANK2Q9UPX8 1470 aa20.63■□□□□ 0.89
VEGFA-219ENST00000518824 PREX1Q8TCU6 1659 aa20.62■□□□□ 0.89
VEGFA-219ENST00000518824 RRP7BPQ9NSQ0 103 aa20.61■□□□□ 0.89
VEGFA-219ENST00000518824 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
VEGFA-219ENST00000518824 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms