RNA–Protein interactions for RNA: ENST00000518714.5

CCNC-207, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-207ENST00000518714 ARHGAP5Q13017 1502 aa29.74■■■□□ 2.35
CCNC-207ENST00000518714 APLP2Q06481 763 aa29.71■■■□□ 2.35
CCNC-207ENST00000518714 EFCAB2Q5VUJ9 269 aa29.71■■■□□ 2.35
CCNC-207ENST00000518714 GPATCH8Q9UKJ3 1502 aaKnown RBP29.71■■■□□ 2.35
CCNC-207ENST00000518714 KANK4Q5T7N3 995 aaPredicted RBP29.68■■■□□ 2.34
CCNC-207ENST00000518714 CCNB3Q8WWL7 1395 aa29.68■■■□□ 2.34
CCNC-207ENST00000518714 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
CCNC-207ENST00000518714 ITSN2Q9NZM3 1697 aa29.67■■■□□ 2.34
CCNC-207ENST00000518714 ADGRL1O94910 1474 aa29.66■■■□□ 2.34
CCNC-207ENST00000518714 RICTORQ6R327 1708 aa29.64■■■□□ 2.34
CCNC-207ENST00000518714 FRMPD1Q5SYB0 1578 aa29.64■■■□□ 2.34
CCNC-207ENST00000518714 DENND4BO75064 1496 aaPredicted RBP29.64■■■□□ 2.33
CCNC-207ENST00000518714 SCAPERQ9BY12 1400 aa29.6■■■□□ 2.33
CCNC-207ENST00000518714 ABCC1P33527 1531 aa29.59■■■□□ 2.33
CCNC-207ENST00000518714 RAPGEF3O95398 923 aa29.58■■■□□ 2.33
CCNC-207ENST00000518714 SAMD9LQ8IVG5 1584 aa29.57■■■□□ 2.32
CCNC-207ENST00000518714 POGZQ7Z3K3 1410 aa29.56■■■□□ 2.32
CCNC-207ENST00000518714 CFDP1Q9UEE9 299 aaPredicted RBP29.56■■■□□ 2.32
CCNC-207ENST00000518714 ZMYM4Q5VZL5 1548 aa29.54■■■□□ 2.32
CCNC-207ENST00000518714 PLEKHH2Q8IVE3 1493 aa29.51■■■□□ 2.32
CCNC-207ENST00000518714 ZNF518AQ6AHZ1 1483 aa29.51■■■□□ 2.31
CCNC-207ENST00000518714 ARHGEF12Q9NZN5 1544 aa29.5■■■□□ 2.31
CCNC-207ENST00000518714 KIAA1107Q9UPP5 1409 aa29.5■■■□□ 2.31
CCNC-207ENST00000518714 KDM5CP41229 1560 aa29.49■■■□□ 2.31
CCNC-207ENST00000518714 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
CCNC-207ENST00000518714 MYOM3Q5VTT5 1437 aa29.47■■■□□ 2.31
CCNC-207ENST00000518714 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
CCNC-207ENST00000518714 SYCP2Q9BX26 1530 aa29.47■■■□□ 2.31
CCNC-207ENST00000518714 MIA2Q96PC5 1412 aa29.44■■■□□ 2.3
CCNC-207ENST00000518714 TRAPPC8Q9Y2L5 1435 aa29.44■■■□□ 2.3
CCNC-207ENST00000518714 ARHGEF40Q8TER5 1519 aa29.43■■■□□ 2.3
CCNC-207ENST00000518714 CAMSAP2Q08AD1 1489 aa29.41■■■□□ 2.3
CCNC-207ENST00000518714 ZNF644Q9H582 1327 aaPredicted RBP29.4■■■□□ 2.3
CCNC-207ENST00000518714 AFAP1Q8N556 730 aa29.4■■■□□ 2.3
CCNC-207ENST00000518714 ZFYVE16Q7Z3T8 1539 aa29.39■■■□□ 2.3
CCNC-207ENST00000518714 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.29
CCNC-207ENST00000518714 MBD5Q9P267 1494 aa29.38■■■□□ 2.29
CCNC-207ENST00000518714 MLH3Q9UHC1 1453 aa29.37■■■□□ 2.29
CCNC-207ENST00000518714 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.298e-10■■■■□ 20.8
CCNC-207ENST00000518714 YEATS2Q9ULM3 1422 aa29.34■■■□□ 2.29
CCNC-207ENST00000518714 ARHGEF5Q12774 1597 aa29.32■■■□□ 2.28
CCNC-207ENST00000518714 FGD6Q6ZV73 1430 aa29.31■■■□□ 2.28
CCNC-207ENST00000518714 KIDINS220Q9ULH0 1771 aa29.31■■■□□ 2.28
CCNC-207ENST00000518714 PTPN23Q9H3S7 1636 aa29.3■■■□□ 2.28
CCNC-207ENST00000518714 RSPH4AQ5TD94 716 aa29.29■■■□□ 2.28
CCNC-207ENST00000518714 INO80Q9ULG1 1556 aaPredicted RBP29.28■■■□□ 2.28
CCNC-207ENST00000518714 CCDC141Q6ZP82 1450 aa29.28■■■□□ 2.28
CCNC-207ENST00000518714 TCOF1Q13428 1488 aaKnown RBP29.27■■■□□ 2.28
CCNC-207ENST00000518714 DIP2CQ9Y2E4 1556 aa29.27■■■□□ 2.28
CCNC-207ENST00000518714 ABCA6Q8N139 1617 aa29.26■■■□□ 2.27
CCNC-207ENST00000518714 ATP10AO60312 1499 aa29.26■■■□□ 2.27
CCNC-207ENST00000518714 SPAG9O60271 1321 aaKnown RBP29.26■■■□□ 2.27
CCNC-207ENST00000518714 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
CCNC-207ENST00000518714 REREQ9P2R6 1566 aa29.23■■■□□ 2.27
CCNC-207ENST00000518714 C9orf84Q5VXU9 1444 aa29.23■■■□□ 2.27
CCNC-207ENST00000518714 RTEL1-TNFRSF6BF6WH68 1400 aa29.21■■■□□ 2.27
CCNC-207ENST00000518714 SIGLEC1Q9BZZ2 1709 aa29.2■■■□□ 2.27
CCNC-207ENST00000518714 MYT1LQ9UL68 1186 aa29.2■■■□□ 2.27
CCNC-207ENST00000518714 PPARGC1BQ86YN6 1023 aaKnown RBP29.19■■■□□ 2.26
CCNC-207ENST00000518714 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
CCNC-207ENST00000518714 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
CCNC-207ENST00000518714 BCORL1Q5H9F3 1711 aa29.14■■■□□ 2.26
CCNC-207ENST00000518714 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
CCNC-207ENST00000518714 ADGBQ8N7X0 1667 aa29.14■■■□□ 2.25
CCNC-207ENST00000518714 TSPY4P0CV99 314 aa29.13■■■□□ 2.25
CCNC-207ENST00000518714 TSPY10P0CW01 314 aa29.13■■■□□ 2.25
CCNC-207ENST00000518714 KDM4FA0A1W2PPD8 638 aa29.12■■■□□ 2.25
CCNC-207ENST00000518714 AGLP35573 1532 aa29.11■■■□□ 2.25
CCNC-207ENST00000518714 ABCC5O15440 1437 aa29.11■■■□□ 2.25
CCNC-207ENST00000518714 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
CCNC-207ENST00000518714 PLXNC1O60486 1568 aa29.1■■■□□ 2.25
CCNC-207ENST00000518714 ARID4BQ4LE39 1312 aaPredicted RBP29.09■■■□□ 2.25
CCNC-207ENST00000518714 DAPK1P53355 1430 aa29.09■■■□□ 2.25
CCNC-207ENST00000518714 ADAMTSL3P82987 1691 aa29.09■■■□□ 2.25
CCNC-207ENST00000518714 A2MP01023 1474 aa29.07■■■□□ 2.24
CCNC-207ENST00000518714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.05■■■□□ 2.24
CCNC-207ENST00000518714 FAM50AQ14320 339 aaKnown RBP29.03■■■□□ 2.24
CCNC-207ENST00000518714 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
CCNC-207ENST00000518714 DHX29Q7Z478 1369 aaKnown RBP29■■■□□ 2.23
CCNC-207ENST00000518714 MADDQ8WXG6 1647 aa28.98■■■□□ 2.23
CCNC-207ENST00000518714 ADGRL2O95490 1459 aa28.94■■■□□ 2.22
CCNC-207ENST00000518714 FER1L4A9Z1Z3 1794 aa28.94■■■□□ 2.22
CCNC-207ENST00000518714 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
CCNC-207ENST00000518714 MLECQ14165 292 aa28.92■■■□□ 2.22
CCNC-207ENST00000518714 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
CCNC-207ENST00000518714 RIMS1Q86UR5 1692 aaKnown RBP28.9■■■□□ 2.22
CCNC-207ENST00000518714 EIF2AK4Q9P2K8 1649 aaKnown RBP28.9■■■□□ 2.22
CCNC-207ENST00000518714 NCOA1Q15788 1441 aa28.89■■■□□ 2.22
CCNC-207ENST00000518714 KIF15Q9NS87 1388 aa28.89■■■□□ 2.22
CCNC-207ENST00000518714 PTPRKQ15262 1439 aa28.88■■■□□ 2.21
CCNC-207ENST00000518714 PTPRMP28827 1452 aa28.87■■■□□ 2.21
CCNC-207ENST00000518714 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
CCNC-207ENST00000518714 CHIC2Q9UKJ5 165 aa28.86■■■□□ 2.21
CCNC-207ENST00000518714 ERBINQ96RT1 1412 aa28.84■■■□□ 2.21
CCNC-207ENST00000518714 RRP7BPQ9NSQ0 103 aa28.84■■■□□ 2.21
CCNC-207ENST00000518714 ROCK1Q13464 1354 aa28.83■■■□□ 2.21
CCNC-207ENST00000518714 RNF17Q9BXT8 1623 aaKnown RBP28.83■■■□□ 2.2
CCNC-207ENST00000518714 KIF3BO15066 747 aa28.82■■■□□ 2.2
CCNC-207ENST00000518714 PPP6R1Q9UPN7 881 aa28.81■■■□□ 2.2
CCNC-207ENST00000518714 CNTLNQ9NXG0 1405 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms