RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
CSGALNACT1-206ENST00000518542 APLP2Q06481 763 aa12.09□□□□□ -0.47
CSGALNACT1-206ENST00000518542 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
CSGALNACT1-206ENST00000518542 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.48
CSGALNACT1-206ENST00000518542 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
CSGALNACT1-206ENST00000518542 TROQ12816 1431 aaPredicted RBP12.05□□□□□ -0.48
CSGALNACT1-206ENST00000518542 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
CSGALNACT1-206ENST00000518542 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
CSGALNACT1-206ENST00000518542 MTUS2Q5JR59 1369 aa12.05□□□□□ -0.48
CSGALNACT1-206ENST00000518542 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
CSGALNACT1-206ENST00000518542 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
CSGALNACT1-206ENST00000518542 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
CSGALNACT1-206ENST00000518542 KIF14Q15058 1648 aa12.04□□□□□ -0.48
CSGALNACT1-206ENST00000518542 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
CSGALNACT1-206ENST00000518542 CD109Q6YHK3 1445 aa12.02□□□□□ -0.49
CSGALNACT1-206ENST00000518542 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
CSGALNACT1-206ENST00000518542 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CSGALNACT1-206ENST00000518542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSGALNACT1-206ENST00000518542 TEX14Q8IWB6 1497 aa12□□□□□ -0.49
CSGALNACT1-206ENST00000518542 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
CSGALNACT1-206ENST00000518542 SUPT6HQ7KZ85 1726 aaKnown RBP11.98□□□□□ -0.49
CSGALNACT1-206ENST00000518542 MYO5CQ9NQX4 1742 aa11.98□□□□□ -0.49
CSGALNACT1-206ENST00000518542 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
CSGALNACT1-206ENST00000518542 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
CSGALNACT1-206ENST00000518542 KANK4Q5T7N3 995 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-206ENST00000518542 PLCH2O75038 1416 aa11.94□□□□□ -0.5
CSGALNACT1-206ENST00000518542 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
CSGALNACT1-206ENST00000518542 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
CSGALNACT1-206ENST00000518542 ARAP3Q8WWN8 1544 aa11.94□□□□□ -0.5
CSGALNACT1-206ENST00000518542 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
CSGALNACT1-206ENST00000518542 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 EFCAB2Q5VUJ9 269 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
CSGALNACT1-206ENST00000518542 ARHGAP5Q13017 1502 aa11.92□□□□□ -0.5
CSGALNACT1-206ENST00000518542 FANCAO15360 1455 aa11.92□□□□□ -0.5
CSGALNACT1-206ENST00000518542 NEO1Q92859 1461 aa11.92□□□□□ -0.5
CSGALNACT1-206ENST00000518542 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
CSGALNACT1-206ENST00000518542 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
CSGALNACT1-206ENST00000518542 AKNAQ7Z591 1439 aa11.89□□□□□ -0.51
CSGALNACT1-206ENST00000518542 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
CSGALNACT1-206ENST00000518542 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
CSGALNACT1-206ENST00000518542 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
CSGALNACT1-206ENST00000518542 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-206ENST00000518542 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
CSGALNACT1-206ENST00000518542 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT1-206ENST00000518542 PLEKHH2Q8IVE3 1493 aa11.84□□□□□ -0.51
CSGALNACT1-206ENST00000518542 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
CSGALNACT1-206ENST00000518542 SAMD9LQ8IVG5 1584 aa11.84□□□□□ -0.51
CSGALNACT1-206ENST00000518542 ADAMTSL3P82987 1691 aa11.83□□□□□ -0.52
CSGALNACT1-206ENST00000518542 ABCC1P33527 1531 aa11.82□□□□□ -0.52
CSGALNACT1-206ENST00000518542 RICTORQ6R327 1708 aa11.81□□□□□ -0.52
CSGALNACT1-206ENST00000518542 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
CSGALNACT1-206ENST00000518542 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
CSGALNACT1-206ENST00000518542 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-206ENST00000518542 FGD6Q6ZV73 1430 aa11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 FBXO41Q8TF61 875 aa11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
CSGALNACT1-206ENST00000518542 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
CSGALNACT1-206ENST00000518542 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
CSGALNACT1-206ENST00000518542 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
CSGALNACT1-206ENST00000518542 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
CSGALNACT1-206ENST00000518542 PTPRMP28827 1452 aa11.78□□□□□ -0.52
CSGALNACT1-206ENST00000518542 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
CSGALNACT1-206ENST00000518542 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
CSGALNACT1-206ENST00000518542 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
CSGALNACT1-206ENST00000518542 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
CSGALNACT1-206ENST00000518542 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.53
CSGALNACT1-206ENST00000518542 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
CSGALNACT1-206ENST00000518542 ZMYM4Q5VZL5 1548 aa11.76□□□□□ -0.53
CSGALNACT1-206ENST00000518542 KDM5CP41229 1560 aa11.76□□□□□ -0.53
CSGALNACT1-206ENST00000518542 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-206ENST00000518542 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-206ENST00000518542 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
CSGALNACT1-206ENST00000518542 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
CSGALNACT1-206ENST00000518542 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
CSGALNACT1-206ENST00000518542 MBD5Q9P267 1494 aa11.75□□□□□ -0.53
CSGALNACT1-206ENST00000518542 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
CSGALNACT1-206ENST00000518542 TSPY4P0CV99 314 aa11.74□□□□□ -0.53
CSGALNACT1-206ENST00000518542 TSPY10P0CW01 314 aa11.74□□□□□ -0.53
CSGALNACT1-206ENST00000518542 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-206ENST00000518542 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-206ENST00000518542 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CSGALNACT1-206ENST00000518542 MLH3Q9UHC1 1453 aa11.73□□□□□ -0.53
CSGALNACT1-206ENST00000518542 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
CSGALNACT1-206ENST00000518542 KIDINS220Q9ULH0 1771 aa11.72□□□□□ -0.53
CSGALNACT1-206ENST00000518542 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.53
CSGALNACT1-206ENST00000518542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
CSGALNACT1-206ENST00000518542 ATP7AQ04656 1500 aa11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ARHGEF40Q8TER5 1519 aa11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 CROCC2H7BZ55 1655 aa11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms